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List of works by Anne Niknejad

An Extended, Boolean Model of the Septation Initiation Network in S.Pombe Provides Insights into Its Regulation.

scientific article published on 5 August 2015

Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method

scientific article

Contribution of exome sequencing to the identification of genes involved in the response to clopidogrel in cardiovascular patients

scientific article published on 20 February 2020

Experiments in searching small proteins in unannotated large eukaryotic genomes

scientific article published on 01 January 2005

Expert curation for building network-based dynamical models: a case study on atherosclerotic plaque formation.

scientific article

Generation of Molecular Models and Pathways

High-performance peptide identification by tandem mass spectrometry allows reliable automatic data processing in proteomics.

scientific article

Identification of a RAI1-associated disease network through integration of exome sequencing, transcriptomics, and 3D genomics.

scientific article

In vitro and in silico processes to identify differentially expressed proteins

scientific article published on 01 August 2004

The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals

scientific article published on 10 October 2020

The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations

scientific article

The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST)

scientific article published on 30 June 2020

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

scientific article (publication date: 4 January 2016)

The SwissLipids knowledgebase for lipid biology

scientific article published on 5 May 2015

Uncovering hidden duplicated content in public transcriptomics data

scientific article

Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon

scientific article

Updates in Rhea - an expert curated resource of biochemical reactions

scientific article

Updates in Rhea - an expert curated resource of biochemical reactions

scientific article published on 15 December 2016

Updates in Rhea--a manually curated resource of biochemical reactions

scientific article

Updates in Rhea: SPARQLing biochemical reaction data

scientific article

vHOG, a multispecies vertebrate ontology of homologous organs groups

scientific article published on 27 January 2012

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