List of works - Samuel A. Isaacson

A First-Passage Kinetic Monte Carlo method for reaction–drift–diffusion processes

A comparison of bimolecular reaction models for stochastic reaction-diffusion systems.

scientific article published on 12 April 2013

A convergent reaction-diffusion master equation ⬇️

scientific article published on August 7, 2013

A microfluidic pumping mechanism driven by non-equilibrium osmotic effects

An unstructured mesh convergent reaction–diffusion master equation for reversible reactions

Biophysical assay for tethered signaling reactions reveals tether-controlled activity for the phosphatase SHP-1.

scientific article published on 24 March 2017

How Reaction-Diffusion PDEs Approximate the Large-Population Limit of Stochastic Particle Models

scientific article published in 2021

Imaging and characterizing cells using tomography

scientific article

Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations

article

Numerical solution of linear Volterra integral equations of the second kind with sharp gradients

article by Samuel A. Isaacson & Robert M. Kirby published May 2011 in Journal of Computational and Applied Mathematics

Reaction-diffusion master equation, diffusion-limited reactions, and singular potentials

scientific article published on 7 December 2009

Reactive Boundary Conditions as Limits of Interaction Potentials for Brownian and Langevin Dynamics

Relationship between the reaction–diffusion master equation and particle tracking models

Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus

scientific article published on 16 November 2020

The Influence of Molecular Reach and Diffusivity on the Efficacy of Membrane-Confined Reactions

The Reaction-Diffusion Master Equation as an Asymptotic Approximation of Diffusion to a Small Target

The influence of spatial variation in chromatin density determined by X-ray tomograms on the time to find DNA binding sites

scientific article published on 17 August 2013

The influence of volume exclusion by chromatin on the time required to find specific DNA binding sites by diffusion