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List of works by Jun Li

6–10× pyrosequencing is a practical approach for whole prokaryote genome studies ⬇️

scientific article published on December 13, 2011

A Molecular-Level Landscape of Diet-Gut Microbiome Interactions: Toward Dietary Interventions Targeting Bacterial Genes

scientific article published on 27 October 2015

A Review of Zoonotic Babesiosis as an Emerging Public Health Threat in Asia

scientific article published in 2021

A draft sequence for the genome of the domesticated silkworm (Bombyx mori).

scientific article

A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms

scientific article

A metagenomic study of the preventive effect of Lactobacillus rhamnosus GG on intestinal polyp formation in ApcMin/+ mice

scientific article published on 22 December 2016

COMAN: a web server for comprehensive metatranscriptomics analysis

scientific article

Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx).

scientific article

Computing Ka and Ks with a consideration of unequal transitional substitutions

scientific article

Correlation between Ka/Ks and Ks is related to substitution model and evolutionary lineage.

scientific article

Designing Dietary Recommendations Using System Level Interactomics Analysis and Network-Based Inference.

scientific article published on 28 September 2017

Epigenetic Silencing of <i>PTEN</i> and Epi-Transcriptional Silencing of <i>MDM2</i> Underlied Progression to Secondary Acute Myeloid Leukemia in Myelodysplastic Syndrome Treated with Hypomethylating Agents

scientific article published on 18 May 2022

Erratum: The sequence and de novo assembly of the giant panda genome

scientific article published in Nature

Evolutionary transients in the rice transcriptome

scientific article published on December 2010

Expansion and persistence of antibiotic-specific resistance genes following antibiotic treatment

scientific article published on 01 January 2021

Exploring mechanisms of diet-colon cancer associations through candidate molecular interaction networks

scientific article

Genetic characterization and evolutionary analysis of 4 Newcastle disease virus isolate full genomes from waterbirds in South China during 2003-2007.

scientific article published on 22 April 2011

Genome sequence of Pseudomonas mendocina DLHK, isolated from a biotrickling reactor.

scientific article published on November 2012

High rate of chimeric gene origination by retroposition in plant genomes

scientific article published on 7 July 2006

Information theory in prediction of cleavage sites of signal peptides.

scientific article published in May 2005

Integrative multiomics analysis reveals host-microbe-metabolite interplays associated with the aging process in Singaporeans

scientific article published on 01 January 2022

KaKs_Calculator: calculating Ka and Ks through model selection and model averaging

scientific article

MESSI: metabolic engineering target selection and best strain identification tool.

scientific article

Modularized evolution in archaeal methanogens phylogenetic forest

scientific article published on 9 December 2014

Myeloproliferative neoplasms treated with hydroxyurea, pegylated interferon alpha-2A or ruxolitinib: clinicohematologic responses, quality-of-life changes and safety in the real-world setting

scientific article published on 01 December 2020

Neutral evolution of ‘non-coding’ complementary DNAs

scientific article published in Nature

Origin and evolution of new exons in rodents

scientific article

Phylodynamics of H5N1 avian influenza virus in Indonesia

scientific article published on 11 May 2012

Phylogeny-based evolutionary, demographical, and geographical dissection of North American type 2 porcine reproductive and respiratory syndrome viruses

scientific article published on 16 June 2010

Probiotics modulated gut microbiota suppresses hepatocellular carcinoma growth in mice

scientific article published on 16 February 2016

Redefining the invertebrate RNA virosphere

scientific article published on 23 November 2016

Structures of Two Coronavirus Main Proteases: Implications for Substrate Binding and Antiviral Drug Design

scientific article

Systematic phylogenetic analysis of influenza A virus reveals many novel mosaic genome segments

scientific article published on 30 March 2013

The Environmental Exposures and Inner- and Intercity Traffic Flows of the Metro System May Contribute to the Skin Microbiome and Resistome

scientific article published on 01 July 2018

The Genomes of Oryza sativa: a history of duplications

scientific article

The Role of Ticks in the Emergence of Borrelia burgdorferi as a Zoonotic Pathogen and Its Vector Control: A Global Systemic Review

scientific article published in 2021

The diploid genome sequence of an Asian individual

scientific article

The genome of the cucumber, Cucumis sativus L

scientific article

The sequence and de novo assembly of the giant panda genome

scientific article

Toward a Metagenomic Understanding on the Bacterial Composition and Resistome in Hong Kong Banknotes.

scientific article published on 13 April 2017

Towards a metagenomic understanding on enhanced biomethane production from waste activated sludge after pH 10 pretreatment

scientific article published on 19 March 2013

Whole-genome sequencing reveals untapped genetic potential in Africa's indigenous cereal crop sorghum

scientific article published on January 2013

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