List of works - Stéphane Joost

A WebGIS platform for the monitoring of Farm Animal Genetic Resources (GENMON).

scientific article

A comparison of the spatial dependence of body mass index among adults and children in a Swiss general population

scientific article published on 10 March 2014

A spatial analysis method (SAM) to detect candidate loci for selection: towards a landscape genomics approach to adaptation.

scientific article published on September 2007

Adaptations to climate-mediated selective pressures in sheep

scientific article

Assessing the spatial dependence of adaptive loci in 43 European and Western Asian goat breeds using AFLP markers

scientific article published on 30 January 2014

Big dairy data to unravel effects of environmental, physiological and morphological factors on milk production of mountain-pastured Braunvieh cows

scientific article published on 01 July 2020

Characterization of single nucleotide polymorphisms in sheep and their variation as evidence of selection

article

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

scientific article

Combining Genotype, Phenotype, and Environment to Infer Potential Candidate Genes

scientific article published on 20 December 2016

Combining Human Computing and Machine Learning to Make Sense of Big (Aerial) Data for Disaster Response

scientific article

Convergent genomic signatures of domestication in sheep and goats

scientific article published on 6 March 2018

Detecting animals in African Savanna with UAVs and the crowds

scientific article published in 2017

Detecting spatial genetic signatures of local adaptation in heterogeneous landscapes

scientific article published on 17 November 2015

Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study

scientific article published on 19 July 2021

Divergent selection in trailing- versus leading-edge populations of Biscutella laevigata

scientific article

Editorial: Advances in Farm Animal Genomic Resources

scientific article

Evaluating urban greening scenarios for urban heat mitigation: a spatially explicit approach

scientific article published on 08 December 2021

First quantitative survey delineates the distribution of chimpanzees in the Eastern Central African Republic

Gene-obesogenic environment interactions in the UK Biobank study

scientific article published on 10 January 2017

Genetic diversity of sheep breeds from Albania, Greece, and Italy assessed by mitochondrial DNA and nuclear polymorphisms (SNPs)

article

Genome-wide variation in nucleotides and retrotransposons in alpine populations of Arabis alpina (Brassicaceae)

scientific article published on 01 May 2019

Geographic clusters of objectively measured physical activity and the characteristics of their built environment in a Swiss urban area

scientific article published on 23 February 2022

High performance computation of landscape genomic models including local indicators of spatial association. ⬇️

scientific article published on November 2016

Identifying European marginal areas in the context of local sheep and goat breeds conservation: A geographic information system approach

Integrating geo-referenced multiscale and multidisciplinary data for the management of biodiversity in livestock genetic resources

scientific article

Integrating landscape genomics and spatially explicit approaches to detect loci under selection in clinal populations

scientific article

Investigation of the genetic diversity of domestic Capra hircus breeds reared within an early goat domestication area in Iran

scientific article

Keys to successful scientific VGI projects

La présence étrangère en Suisse. Enjeux et réalités territoriales

Landscape genomic approach to detect selection signatures in locally adapted Brazilian swine genetic groups.

scientific article published on 12 October 2017

Landscape genomics and biased FST approaches reveal single nucleotide polymorphisms under selection in goat breeds of North-East Mediterranean

article

Meeting review. Uncovering the genetic basis of adaptive change: on the intersection of landscape genomics and theoretical population genetics

scientific article published in July 2013

Monitoring biodiversity in the Anthropocene using remote sensing in species distribution models

scientific article

Multilocus genotypic data reveal high genetic diversity and low population genetic structure of Iranian indigenous sheep.

scientific article

Multiscale Very High Resolution Topographic Models in Alpine Ecology: Pros and Cons of Airborne LiDAR and Drone-Based Stereo-Photogrammetry Technologies

scientific article published on 20 April 2021

Multiscale analysis of geomorphological and geological features in high resolution digital elevation models using the wavelet transform

Multiscale landscape genomic models to detect signatures of selection in the alpine plant Biscutella laevigata

scientific article published on 10 January 2018

Neighbourhood socioeconomic deprivation and allostatic load: a multi-cohort study

scientific article published on 19 June 2019

Objectives, criteria and methods for using molecular genetic data in priority setting for conservation of animal genetic resources

scientific article

Open computational landscape genetics

article

Overlapping spatial clusters of sugar-sweetened beverage intake and body mass index in Geneva state, Switzerland

scientific article published on 14 November 2019

Persistence of butterfly populations in fragmented habitats along urban density gradients: motility helps

scientific article published on 09 August 2017

Persistent spatial clusters of high body mass index in a Swiss urban population as revealed by the 5-year GeoCoLaus longitudinal study

scientific article

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field

scientific article

Population density and water balance influence the global occurrence of hepatitis E epidemics

scientific article published on 11 July 2019

Promoting collaboration between livestock and wildlife conservation genetics communities

article

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025

scientific article

Rapid identification and interpretation of gene-environment associations using the new R.SamBada landscape genomics pipeline

scientific article published on 24 June 2019

Sampling strategy optimization to increase statistical power in landscape genomics: A simulation-based approach

scientific article published on 21 October 2019

Seascape genomics as a new tool to empower coral reef conservation strategies: An example on north-western Pacific Acropora digitifera

scientific article published on 19 March 2020

Seascape genomics reveals candidate molecular targets of heat stress adaptation in three coral species

scientific article published on 23 February 2021

Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection

scientific article

Spatial areas of genotype probability: Predicting the spatial distribution of adaptive genetic variants under future climatic conditions

scientific article published in 2021

Spatial clustering for district heating integration in urban energy systems: Application to geothermal energy

Spatial distribution of mammography adherence in a Swiss urban population and its association with socioeconomic status

scientific article published on 25 October 2018

Spatial variability of potassium in agricultural soils of the canton of Fribourg, Switzerland

article

Spatial variability of soil phosphorus in the Fribourg canton, Switzerland

article

The characterization of goat genetic diversity: Towards a genomic approach

Un rôle pour la science de l'information géographique en écologie moléculaire La détection de régions du génome soumises à la sélection naturelle

Use of Qualitative Environmental and Phenotypic Variables in the Context of Allele Distribution Models: Detecting Signatures of Selection in the Genome of Lake Victoria Cichlids

article

Very high-resolution digital elevation models: are multi-scale derived variables ecologically relevant?

scientific article published in 2015

List of works by Stéphane Joost

A WebGIS platform for the monitoring of Farm Animal Genetic Resources (GENMON).

A comparison of the spatial dependence of body mass index among adults and children in a Swiss general population

A spatial analysis method (SAM) to detect candidate loci for selection: towards a landscape genomics approach to adaptation.

Adaptations to climate-mediated selective pressures in sheep

Assessing the spatial dependence of adaptive loci in 43 European and Western Asian goat breeds using AFLP markers

Big dairy data to unravel effects of environmental, physiological and morphological factors on milk production of mountain-pastured Braunvieh cows

Characterization of single nucleotide polymorphisms in sheep and their variation as evidence of selection

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

Combining Genotype, Phenotype, and Environment to Infer Potential Candidate Genes

Combining Human Computing and Machine Learning to Make Sense of Big (Aerial) Data for Disaster Response

Convergent genomic signatures of domestication in sheep and goats

Detecting animals in African Savanna with UAVs and the crowds

Detecting spatial genetic signatures of local adaptation in heterogeneous landscapes

Detection of Spatiotemporal Clusters of COVID-19–Associated Symptoms and Prevention Using a Participatory Surveillance App: Protocol for the @choum Study

Divergent selection in trailing- versus leading-edge populations of Biscutella laevigata

Editorial: Advances in Farm Animal Genomic Resources

Evaluating urban greening scenarios for urban heat mitigation: a spatially explicit approach

First quantitative survey delineates the distribution of chimpanzees in the Eastern Central African Republic

Gene-obesogenic environment interactions in the UK Biobank study

Genetic diversity of sheep breeds from Albania, Greece, and Italy assessed by mitochondrial DNA and nuclear polymorphisms (SNPs)

Genome-wide variation in nucleotides and retrotransposons in alpine populations of Arabis alpina (Brassicaceae)

Geographic clusters of objectively measured physical activity and the characteristics of their built environment in a Swiss urban area

High performance computation of landscape genomic models including local indicators of spatial association. ⬇️

Identifying European marginal areas in the context of local sheep and goat breeds conservation: A geographic information system approach

Integrating geo-referenced multiscale and multidisciplinary data for the management of biodiversity in livestock genetic resources

Integrating landscape genomics and spatially explicit approaches to detect loci under selection in clinal populations

Investigation of the genetic diversity of domestic Capra hircus breeds reared within an early goat domestication area in Iran

Keys to successful scientific VGI projects

La présence étrangère en Suisse. Enjeux et réalités territoriales

Landscape genomic approach to detect selection signatures in locally adapted Brazilian swine genetic groups.

Landscape genomics and biased FST approaches reveal single nucleotide polymorphisms under selection in goat breeds of North-East Mediterranean

Meeting review. Uncovering the genetic basis of adaptive change: on the intersection of landscape genomics and theoretical population genetics

Monitoring biodiversity in the Anthropocene using remote sensing in species distribution models

Multilocus genotypic data reveal high genetic diversity and low population genetic structure of Iranian indigenous sheep.

Multiscale Very High Resolution Topographic Models in Alpine Ecology: Pros and Cons of Airborne LiDAR and Drone-Based Stereo-Photogrammetry Technologies

Multiscale analysis of geomorphological and geological features in high resolution digital elevation models using the wavelet transform

Multiscale landscape genomic models to detect signatures of selection in the alpine plant Biscutella laevigata

Neighbourhood socioeconomic deprivation and allostatic load: a multi-cohort study

Objectives, criteria and methods for using molecular genetic data in priority setting for conservation of animal genetic resources

Open computational landscape genetics

Overlapping spatial clusters of sugar-sweetened beverage intake and body mass index in Geneva state, Switzerland

Persistence of butterfly populations in fragmented habitats along urban density gradients: motility helps

Persistent spatial clusters of high body mass index in a Swiss urban population as revealed by the 5-year GeoCoLaus longitudinal study

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field

Population density and water balance influence the global occurrence of hepatitis E epidemics

Promoting collaboration between livestock and wildlife conservation genetics communities

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025

Rapid identification and interpretation of gene-environment associations using the new R.SamBada landscape genomics pipeline

Sampling strategy optimization to increase statistical power in landscape genomics: A simulation-based approach

Seascape genomics as a new tool to empower coral reef conservation strategies: An example on north-western Pacific Acropora digitifera

Seascape genomics reveals candidate molecular targets of heat stress adaptation in three coral species

Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection

Spatial areas of genotype probability: Predicting the spatial distribution of adaptive genetic variants under future climatic conditions

Spatial clustering for district heating integration in urban energy systems: Application to geothermal energy

Spatial distribution of mammography adherence in a Swiss urban population and its association with socioeconomic status

Spatial variability of potassium in agricultural soils of the canton of Fribourg, Switzerland

Spatial variability of soil phosphorus in the Fribourg canton, Switzerland

The characterization of goat genetic diversity: Towards a genomic approach

Un rôle pour la science de l'information géographique en écologie moléculaire La détection de régions du génome soumises à la sélection naturelle

Use of Qualitative Environmental and Phenotypic Variables in the Context of Allele Distribution Models: Detecting Signatures of Selection in the Genome of Lake Victoria Cichlids

Very high-resolution digital elevation models: are multi-scale derived variables ecologically relevant?