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List of works by Catherine Rivoire

Activities at the Universal Protein Resource (UniProt)

scientific article (publication date: 2014)

Annotation of biologically relevant ligands in UniProtKB using ChEBI

scientific article published on 9 December 2022

Automated annotation of microbial proteomes in SWISS-PROT.

scientific article published in February 2003

Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase

scientific article (publication date: 2009)

Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data

scientific article

From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase

scientific article

Gene Ontology Consortium: going forward

scientific article (publication date: 2015)

Gene Ontology annotations and resources

scientific article

HAMAP as SPARQL rules-A portable annotation pipeline for genomes and proteomes

scientific article published on 01 February 2020

HAMAP in 2013, new developments in the protein family classification and annotation system

scientific article

HAMAP in 2015: updates to the protein family classification and annotation system

scientific article

HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot

scientific article

InterPro in 2011: new developments in the family and domain prediction database

scientific article

InterPro in 2011: new developments in the family and domain prediction database

scientific article published on 19 May 2012

InterPro in 2017-beyond protein family and domain annotations

scientific article

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

article by Alex Mitchell et al published 6 November 2018 in Nucleic Acids Research

Minimizing proteome redundancy in the UniProt Knowledgebase

scientific article published on 26 December 2016

Ongoing and future developments at the Universal Protein Resource

scientific article

Perspectives on tracking data reuse across biodata resources

Reorganizing the protein space at the Universal Protein Resource (UniProt)

scientific article (publication date: 2012)

SwissBioPics—an interactive library of cell images for the visualization of subcellular location data

scientific article published in January 2022

The Gene Ontology in 2010: extensions and refinements

scientific article

The Gene Ontology knowledgebase in 2023

scientific article published in 2023

The Gene Ontology: enhancements for 2011

scientific article

The InterPro protein families and domains database: 20 years on

scientific article published on 06 November 2020

The InterPro protein families database: the classification resource after 15 years

scientific article

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases

scientific article (publication date: 4 January 2016)

The UniProt-GO Annotation database in 2011.

scientific article published on 28 November 2011

The Universal Protein Resource (UniProt) 2009

scientific article (publication date: 2009)

The Universal Protein Resource (UniProt) in 2010

scientific article (publication date: 2010)

UniProt Knowledgebase: a hub of integrated protein data

scientific article (publication date: 2011)

UniProt: a hub for protein information

scientific article (publication date: 2015)

UniProt: the Universal Protein Knowledgebase in 2023

scientific article published on 21 November 2022

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase

scientific article published on 12 May 2020

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase

scientific article published in December 2020

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