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List of works by Olivier Hanotte

863 genomes reveal the origin and domestication of chicken

scientific article published on 25 June 2020

A longitudinal assessment of the serological response to Theileria parva and other tick-borne parasites from birth to one year in a cohort of indigenous calves in western Kenya

scientific article

Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping

scientific article

African Indigenous Cattle: Unique Genetic Resources in a Rapidly Changing World

scientific article

African pastoralism: genetic imprints of origins and migrations.

scientific article

Applicability of bovine microsatellite markers for population genetic studies on African buffalo (Syncerus caffer).

scientific article

Assessment of cattle genetic introgression into domestic yak populations using mitochondrial and microsatellite DNA markers.

scientific article

Author Correction: 863 genomes reveal the origin and domestication of chicken

scientific article published on 20 July 2020

Bluetongue and epizootic haemorrhagic disease virus in local breeds of cattle in Kenya.

scientific article

Cattle genome-wide analysis reveals genetic signatures in trypanotolerant N'Dama.

scientific article

Co-infections determine patterns of mortality in a population exposed to parasite infection

scientific article published on 20 March 2015

Comparative analysis of the chicken IFITM locus by targeted genome sequencing reveals evolution of the locus and positive selection in IFITM1 and IFITM3

scientific article published on 05 April 2019

Comparison of linkage disequilibrium and haplotype diversity on macro- and microchromosomes in chicken

scientific article

Conservation priorities for Ethiopian sheep breeds combining threat status, breed merits and contributions to genetic diversity

scientific article published on 17 June 2008

Cytokine mRNA profiling of peripheral blood mononuclear cells from trypanotolerant and trypanosusceptible cattle infected with Trypanosoma congolense.

scientific article

Design and descriptive epidemiology of the Infectious Diseases of East African Livestock (IDEAL) project, a longitudinal calf cohort study in western Kenya

scientific article

Domesticating Animals in Africa: Implications of Genetic and Archaeological Findings

article

East Asian contributions to Dutch traditional and western commercial chickens inferred from mtDNA analysis.

scientific article published on 10 December 2010

Ecology. Time to tap Africa's livestock genomes.

scientific article published in June 2010

Effective population size of an indigenous Swiss cattle breed estimated from linkage disequilibrium.

scientific article published in October 2010

Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus

scientific article

Exploring evidence of positive selection signatures in cattle breeds selected for different traits.

scientific article published on 13 September 2017

Expression of trypanotolerance in N'Dama x Boran crosses under field challenge in relation to N'Dama genome content ⬇️

scientific article

Genetic and morphological characterisation of the Ankole Longhorn cattle in the African Great Lakes region

scientific article published on 12 August 2008

Genetic diversity and differentiation of Mongolian and Russian yak populations

scientific article published on 01 April 2005

Genetic diversity and relationships of indigenous Kenyan camel (Camelus dromedarius) populations: implications for their classification

scientific article published on 01 February 2003

Genetic polymorphism for alternative mating behaviour in lekking male ruff Philomachus pugnax

scientific article published in Nature

Genetic relationships among Kenyan and other East African indigenous chickens.

scientific article published on October 2007

Genetic resistance: tolerance to vector-borne diseases and the prospects and challenges of genomics.

scientific article published on April 2015

Genetic susceptibility to infectious disease in East African Shorthorn Zebu: a genome-wide analysis of the effect of heterozygosity and exotic introgression.

scientific article

Genome Sequence Analysis Reveals Selection Signatures in Endangered Trypanotolerant West African Muturu Cattle.

scientific article

Genome-Wide Variation, Candidate Regions and Genes Associated With Fat Deposition and Tail Morphology in Ethiopian Indigenous Sheep

article

Genome-wide SNP data unveils the globalization of domesticated pigs. ⬇️

scientific article published on 21 September 2017

Genome-wide analysis reveals the ancient and recent admixture history of East African Shorthorn Zebu from Western Kenya

scientific article

Genome-wide analysis reveals the extent of EAV-HP integration in domestic chicken

scientific article published on 14 October 2015

Genome-wide association studies of immune, disease and production traits in indigenous chicken ecotypes.

scientific article published on 29 September 2016

Hematological profile of East African short-horn zebu calves from birth to 51 weeks of age.

scientific article published on June 2012

Historical demographic profiles and genetic variation of the East African Butana and Kenana indigenous dairy zebu cattle.

scientific article

Identification of novel loci associated with gastrointestinal parasite resistance in a Red Maasai x Dorper backcross population

scientific article

Identification of quantitative trait loci affecting resistance to gastrointestinal parasites in a double backcross population of Red Maasai and Dorper sheep.

scientific article published on 29 April 2011

Infection-interactions in Ethiopian village chickens

scientific article

Investigation of X- and Y-specific single nucleotide polymorphisms in taurine (Bos taurus) and indicine (Bos indicus) cattle.

scientific article published on 20 November 2007

Linkage disequilibrium between alleles at highly polymorphic mini- and micro-satellite loci of Theileria parva isolated from cattle in three regions of Kenya.

scientific article published on 10 March 2006

Micro- and minisatellite-expressed sequence tag (EST) markers discriminate between populations of Rhipicephalus appendiculatus

scientific article published on 01 June 2012

Mike Bruford (1963–2023)

scientific article published in 2023

Mitochondrial DNA origin of indigenous malagasy chicken.

scientific article published on December 2008

Mitochondrial DNA reveals multiple introductions of domestic chicken in East Africa.

scientific article published on 5 December 2010

Mortality in East African shorthorn zebu cattle under one year: predictors of infectious-disease mortality

scientific article

Multi-locus genotyping reveals absence of genetic structure in field populations of the brown ear tick (Rhipicephalus appendiculatus) in Kenya

scientific article published on 5 August 2015

Novel and known signals of selection for fat deposition in domestic sheep breeds from Africa and Eurasia.

scientific article published on 14 June 2019

Parasite co-infections and their impact on survival of indigenous cattle

scientific article

Parasite co-infections show synergistic and antagonistic interactions on growth performance of East African zebu cattle under one year.

scientific article

Pastoralists' indigenous selection criteria and other breeding practices of the long-horned Ankole cattle in Uganda

scientific article published on 30 July 2011

Polymorphic microsatellites in the blue tit Parus caeruleus and their cross-species utility in 20 songbird families.

scientific article published in November 2000

Polymorphisms in MC1R and ASIP Genes are Associated with Coat Color Variation in the Arabian Camel

scientific article published on 01 August 2018

Prevalence and molecular characterisation of Eimeria species in Ethiopian village chickens.

scientific article

Reconstructing the origin and dispersal patterns of village chickens across East Africa: insights from autosomal markers

scientific article published on May 2013

Reply to Marom et al.: Mitochondrial panmixia in dromedaries predates ancient caravan trading.

scientific article published on 02 August 2016

Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics

scientific article (publication date: 3 November 2009)

Satellite DNA polymorphisms and AFLP correlate with Bos indicus-taurus hybridization

scientific article published on 01 August 1999

Seroprevalence of respiratory viral pathogens of indigenous calves in Western Kenya.

scientific article published on 26 August 2016

Sex typing of Aratinga parrots using the human minisatellite probe 33.15 ⬇️

scientific article published on October 11, 1992

Signatures of Selection for Environmental Adaptation and Zebu × Taurine Hybrid Fitness in East African Shorthorn Zebu

scientific article

Signatures of positive selection in African Butana and Kenana dairy zebu cattle.

scientific article

Signatures of positive selection in East African Shorthorn Zebu: A genome-wide single nucleotide polymorphism analysis

scientific article

The History of African Village Chickens: an Archaeological and Molecular Perspective

scientific article published on 3 March 2013

The epidemiology of tick-borne haemoparasites as determined by the reverse line blot hybridization assay in an intensively studied cohort of calves in western Kenya

scientific article published on 16 March 2015

The genome landscape of indigenous African cattle

scientific article published on 20 February 2017

The impact of co-infections on the haematological profile of East African Short-horn Zebu calves

scientific article

The mosaic genome of indigenous African cattle as a unique genetic resource for African pastoralism

scientific article published on 28 September 2020

Trypanosomosis: a priority disease in tsetse-challenged areas of Burkina Faso

scientific article

Trypanotolerance in N'Dama x Boran crosses under natural trypanosome challenge: effect of test-year environment, gender, and breed composition

scientific article

Understanding bovine trypanosomiasis and trypanotolerance: the promise of functional genomics

scientific article published on 01 May 2005

Variation and covariation in strongyle infection in East African shorthorn zebu calves.

scientific article

Whole genome detection of signature of positive selection in African cattle reveals selection for thermotolerance.

scientific article published on 27 July 2017

Whole genome scan reveals the genetic signature of African Ankole cattle breed and potential for higher quality beef

scientific article

Whole genome sequences of 234 indigenous African chickens from Ethiopia

publication published on 14 February 2022

Whole genome structural analysis of Caribbean hair sheep reveals quantitative link to West African ancestry

scientific article

Whole-Genome Resequencing of Red Junglefowl and Indigenous Village Chicken Reveal New Insights on the Genome Dynamics of the Species.

scientific article published on 20 July 2018

Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle

scientific article (publication date: March 2014)

c-Myc inhibits myoblast differentiation and promotes myoblast proliferation and muscle fibre hypertrophy by regulating the expression of its target genes, miRNAs and lincRNAs

scientific article published on 21 May 2018

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