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List of works by Marcio Luis Acencio

A GO catalogue of human DNA-binding transcription factors

scientific article published on 28 October 2020

A machine learning approach for genome-wide prediction of morbid and druggable human genes based on systems-level data.

scientific article

An ensemble framework for identifying essential proteins.

scientific article

COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms

CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination

scientific article published on 01 October 2019

CausalTab: PSI-MITAB 2.8 updated format for signaling data representation and dissemination

scientific article published on 6 August 2018

Cooperative RNA polymerase molecules behavior on a stochastic sequence-dependent model for transcription elongation

scientific article

GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks.

scientific article

Genome-wide microRNA screening in Nile tilapia reveals pervasive isomiRs' transcription, sex-biased arm switching and increasing complexity of expression throughout development.

scientific article

HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions ⬇️

scientific article published on August 17, 2012

Impacts of the overexpression of a tomato translationally controlled tumor protein (TCTP) in tobacco revealed by phenotypic and transcriptomic analysis

scientific article published on 4 March 2017

Latent Membrane Protein 1 (LMP1) from Epstein-Barr Virus (EBV) Strains M81 and B95.8 Modulate miRNA Expression When Expressed in Immortalized Human Nasopharyngeal Cells

scientific article published on 16 February 2022

Predicting Essential Genes and Proteins Based on Machine Learning and Network Topological Features: A Comprehensive Review

scientific article

Prediction of Druggable Proteins Using Machine Learning and Systems Biology: A Mini-Review

scientific article

Prediction of oncogenic interactions and cancer-related signaling networks based on network topology.

scientific article

The Cytoscape BioGateway App: explorative network building from the BioGateway triple store

scientific article published on 09 November 2019

The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST)

scientific article published on 30 June 2020

The development of a universal in silico predictor of protein-protein interactions

scientific article

The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags

scientific article published on 30 October 2003

The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis

scientific article published in July 2000

Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information

scientific article published on 16 September 2009

Transcriptome response signatures associated with the overexpression of a mitochondrial uncoupling protein (AtUCP1) in tobacco

scientific article published on 24 June 2015

Unravelling the Neospora caninum secretome through the secreted fraction (ESA) and quantification of the discharged tachyzoite using high-resolution mass spectrometry-based proteomics

scientific article

miRTil: An Extensive Repository for Nile Tilapia microRNA Next Generation Sequencing Data

scientific article published on 22 July 2020

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