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List of works by Midori A Harris

A guide to best practices for Gene Ontology (GO) manual annotation.

scientific article published on 09 July 2013

A method for increasing expressivity of Gene Ontology annotations using a compositional approach

scientific article

A short study on the success of the Gene Ontology

2004 article

Annotation of parasite genomes

scientific article published on January 2004

Canto: an online tool for community literature curation

scientific article

Community curation in PomBase: enabling fission yeast experts to provide detailed, standardized, sharable annotation from research publications

scientific article published on 01 January 2020

Comparison of the complete protein sets of worm and yeast: orthology and divergence

scientific article

Cross-product extensions of the Gene Ontology

scientific article

Developing an ontology

scientific article published on January 2008

Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology

scientific article

Expanding yeast knowledge online

scientific article

FYPO: the fission yeast phenotype ontology

scientific article (publication date: July 2013)

Fission stories: using PomBase to understand Schizosaccharomyces pombe biology

scientific article published on 01 April 2022

Gene Ontology Consortium: going forward

scientific article (publication date: 2015)

Gene Ontology annotations and resources

scientific article

Gene ontology: tool for the unification of biology

scientific article

Hidden in plain sight: What remains to be discovered in the eukaryotic proteome?

scholarly article published 16 November 2018

How the gene ontology evolves

scientific article (publication date: 5 August 2011)

Integrating functional genomic information into the Saccharomyces genome database

scientific article

JaponicusDB: rapid deployment of a model organism database for an emerging model species

scientific article published on 01 April 2022

Mcm1 regulates donor preference controlled by the recombination enhancer in Saccharomyces mating-type switching

scientific article published on June 1, 1998

Model organism databases: essential resources that need the support of both funders and users

scientific article

Muscle Research and Gene Ontology: New standards for improved data integration

scientific article

OBO-Edit--an ontology editor for biologists

scientific article

Ontology engineering

scientific article

PomBase 2015: updates to the fission yeast database

scientific article

PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information

article

PomBase: The Scientific Resource for Fission Yeast

PomBase: a comprehensive online resource for fission yeast

scientific article

Representing kidney development using the gene ontology

scientific article

Saccharomyces Genome Database

scientific article published in January 2002

Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO)

scientific article

Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data

scientific article

Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology

scientific article

Standards and ontologies for functional genomics 2.

scientific article published on January 2004

Standards and ontologies for functional genomics: towards unified ontologies for biology and biomedicine

scientific article published on January 2003

Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns

scientific article published on 02 September 2020

The Gene Ontology (GO) database and informatics resource

scientific article (publication date: 2004)

The Gene Ontology (GO) project: structured vocabularies for molecular biology and their application to genome and expression analysis

scientific article

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species

scientific article published on 01 January 2020

The Protein Feature Ontology: a tool for the unification of protein feature annotations

scientific article

Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure

scientific article