List of works - Anders Gorm Pedersen

137 ancient human genomes from across the Eurasian steppes

scientific article published in Nature

A DNA structural atlas for Escherichia coli

scientific article (publication date: June 2000)

A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome

scientific article published on 6 April 2016

A human phenome-interactome network of protein complexes implicated in genetic disorders

scientific article (publication date: March 2007)

Acute Influenza A virus outbreak in an enzootic infected sow herd: Impact on viral dynamics, genetic and antigenic variability and effect of maternally derived antibodies and vaccination

scientific article published on 14 November 2019

Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods

scientific article

Bayesian prediction of bacterial growth temperature range based on genome sequences

scientific article

Breadth of T Cell Responses After Immunization with Adenovirus Vectors Encoding Ancestral Antigens or Polyvalent Papillomavirus Antigens

scientific article published on 21 January 2017

Characterization of rotavirus strains in a Danish population: high frequency of mixed infections and diversity within the VP4 gene of P[8] strains.

scientific article

Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies.

scientific article published on 25 April 2018

Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira.

scientific article published on 7 March 2018

Computational analyses and annotations of theArabidopsisperoxidase gene family

article

Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction

scientific article published on 20 October 2015

DNA secondary structures are associated with recombination in major Plasmodium falciparum variable surface antigen gene families

scientific article

Direct acting antiviral treatment of chronic hepatitis C in Denmark: factors associated with and barriers to treatment initiation

scholarly article by Christina Sølund et al published 2 May 2018 in Scandinavian Journal of Gastroenterology

Early divergent strains of Yersinia pestis in Eurasia 5,000 years ago

scientific article

Epitope mapping and topographic analysis of VAR2CSA DBL3X involved in P. falciparum placental sequestration

scientific article

Evidence for Vertical Inheritance and Loss of the Leukotoxin Operon in Genus Mannheimia

scientific article published on 13 April 2007

Evolution of the leukotoxin promoter in genus Mannheimia

scientific article

Evolutionary analysis of whole-genome sequences confirms inter-farm transmission of Aleutian mink disease virus

scientific article published on 13 June 2017

FUT2-ABO epistasis increases the risk of early childhood asthma and Streptococcus pneumoniae respiratory illnesses

scientific article

Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid representation

scientific article published on 3 October 2007

Fish Oil-Derived Fatty Acids in Pregnancy and Wheeze and Asthma in Offspring

scientific article

Genetic evolution of HIV in patients remaining on a stable HAART regimen despite insufficient viral suppression

article

Global phylogenetic analysis of contemporary aleutian mink disease viruses (AMDVs).

scientific article

Higher variability in the number of sexual partners in males can contribute to a higher prevalence of sexually transmitted diseases in females.

scientific article published on 21 July 2009

Human endogenous retroviruses form a reservoir of T cell targets in hematological cancers

scientific article published on 09 November 2020

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

scientific article published on 6 July 2014

Identification of Tn5397-like and Tn916-like transposons and diversity of the tetracycline resistance gene tet(M) in enterococci from humans, pigs and poultry

scientific article published on 24 March 2006

Identification of a novel Mannheimia granulomatis lineage from lesions in roe deer (Capreolus capreolus).

scientific article

InterMap3D: predicting and visualizing co-evolving protein residues.

scientific article

Investigating signs of recent evolution in the pool of proviral HIV type 1 DNA during years of successful HAART.

scientific article published on January 2007

Investigations of Escherichia coli promoter sequences with artificial neural networks: new signals discovered upstream of the transcriptional startpoint.

scientific article published in January 1995

Limited inter- and intra-patient sequence diversity of the genetic lineage A human metapneumovirus fusion gene

scientific article published on August 2005

MaxAlign: maximizing usable data in an alignment

scientific article

Neural network prediction of translation initiation sites in eukaryotes: perspectives for EST and genome analysis.

scientific article published in January 1997

Outbreak tracking of Aleutian mink disease virus (AMDV) using partial NS1 gene sequencing

scientific article

Plasmodium falciparum erythrocyte membrane protein 1 diversity in seven genomes--divide and conquer

scientific article

Protein Evolution Is Faster Outside the Cell

scientific article published on 04 August 2006

Rescue of the highly virulent classical swine fever virus strain "Koslov" from cloned cDNA and first insights into genome variations relevant for virulence

scientific article published on 19 September 2014

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

scientific article

Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses

scientific article published on 23 February 2020

Therapeutic Vaccine Against Primate Papillomavirus Infections of the Cervix

scientific article

Using expected sequence features to improve basecalling accuracy of amplicon pyrosequencing data

scientific article

Virus Adaptation and Selection Following Challenge of Animals Vaccinated against Classical Swine Fever Virus

scientific article published on 10 October 2019

List of works by Anders Gorm Pedersen

137 ancient human genomes from across the Eurasian steppes

A DNA structural atlas for Escherichia coli

A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome

A human phenome-interactome network of protein complexes implicated in genetic disorders

Acute Influenza A virus outbreak in an enzootic infected sow herd: Impact on viral dynamics, genetic and antigenic variability and effect of maternally derived antibodies and vaccination

Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods

Bayesian prediction of bacterial growth temperature range based on genome sequences

Breadth of T Cell Responses After Immunization with Adenovirus Vectors Encoding Ancestral Antigens or Polyvalent Papillomavirus Antigens

Characterization of rotavirus strains in a Danish population: high frequency of mixed infections and diversity within the VP4 gene of P[8] strains.

Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies.

Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira.

Computational analyses and annotations of theArabidopsisperoxidase gene family

Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction

DNA secondary structures are associated with recombination in major Plasmodium falciparum variable surface antigen gene families

Direct acting antiviral treatment of chronic hepatitis C in Denmark: factors associated with and barriers to treatment initiation

Early divergent strains of Yersinia pestis in Eurasia 5,000 years ago

Epitope mapping and topographic analysis of VAR2CSA DBL3X involved in P. falciparum placental sequestration

Evidence for Vertical Inheritance and Loss of the Leukotoxin Operon in Genus Mannheimia

Evolution of the leukotoxin promoter in genus Mannheimia

Evolutionary analysis of whole-genome sequences confirms inter-farm transmission of Aleutian mink disease virus

FUT2-ABO epistasis increases the risk of early childhood asthma and Streptococcus pneumoniae respiratory illnesses

Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid representation

Fish Oil-Derived Fatty Acids in Pregnancy and Wheeze and Asthma in Offspring

Genetic evolution of HIV in patients remaining on a stable HAART regimen despite insufficient viral suppression

Global phylogenetic analysis of contemporary aleutian mink disease viruses (AMDVs).

Higher variability in the number of sexual partners in males can contribute to a higher prevalence of sexually transmitted diseases in females.

Human endogenous retroviruses form a reservoir of T cell targets in hematological cancers

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

Identification of Tn5397-like and Tn916-like transposons and diversity of the tetracycline resistance gene tet(M) in enterococci from humans, pigs and poultry

Identification of a novel Mannheimia granulomatis lineage from lesions in roe deer (Capreolus capreolus).

InterMap3D: predicting and visualizing co-evolving protein residues.

Investigating signs of recent evolution in the pool of proviral HIV type 1 DNA during years of successful HAART.

Investigations of Escherichia coli promoter sequences with artificial neural networks: new signals discovered upstream of the transcriptional startpoint.

Limited inter- and intra-patient sequence diversity of the genetic lineage A human metapneumovirus fusion gene

MaxAlign: maximizing usable data in an alignment

Neural network prediction of translation initiation sites in eukaryotes: perspectives for EST and genome analysis.

Outbreak tracking of Aleutian mink disease virus (AMDV) using partial NS1 gene sequencing

Plasmodium falciparum erythrocyte membrane protein 1 diversity in seven genomes--divide and conquer

Protein Evolution Is Faster Outside the Cell

Rescue of the highly virulent classical swine fever virus strain "Koslov" from cloned cDNA and first insights into genome variations relevant for virulence

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses

Therapeutic Vaccine Against Primate Papillomavirus Infections of the Cervix

Using expected sequence features to improve basecalling accuracy of amplicon pyrosequencing data

Virus Adaptation and Selection Following Challenge of Animals Vaccinated against Classical Swine Fever Virus