List of works - James C Wright

Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo

scientific article

Confident and sensitive phosphoproteomics using combinations of collision induced dissociation and electron transfer dissociation

scientific article published on 21 March 2014

Cross species proteomics.

scientific article published on January 2010

DecoyPyrat: Fast Non-redundant Hybrid Decoy Sequence Generation for Large Scale Proteomics

scientific article

Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator

scientific article

Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger

scientific article

Expression Atlas update--an integrated database of gene and protein expression in humans, animals and plants.

scientific article

Flexible Data Analysis Pipeline for High-Confidence Proteogenomics

scientific article

GENCODE reference annotation for the human and mouse genomes

scientific article published on 01 January 2019

Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells.

scientific article published on August 2017

Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow

scientific article

Interferon-driven alterations of the host's amino acid metabolism in the pathogenesis of typhoid fever

scientific article published on 23 May 2016

Recent developments in proteome informatics for mass spectrometry analysis

scientific article published on February 2009

Shotgun proteomics aids discovery of novel protein-coding genes, alternative splicing, and "resurrected" pseudogenes in the mouse genome

scientific article

The Citrobacter rodentium type III secretion system effector EspO affects mucosal damage repair and antimicrobial responses

scientific article published on 26 October 2018

The OMSSAPercolator: an automated tool to validate OMSSA results.

scientific article

The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium

scientific article (publication date: December 2012)

List of works by James C Wright

Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo

Confident and sensitive phosphoproteomics using combinations of collision induced dissociation and electron transfer dissociation

Cross species proteomics.

DecoyPyrat: Fast Non-redundant Hybrid Decoy Sequence Generation for Large Scale Proteomics

Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator

Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger

Expression Atlas update--an integrated database of gene and protein expression in humans, animals and plants.

Flexible Data Analysis Pipeline for High-Confidence Proteogenomics

GENCODE reference annotation for the human and mouse genomes

Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells.

Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow

Interferon-driven alterations of the host's amino acid metabolism in the pathogenesis of typhoid fever

Recent developments in proteome informatics for mass spectrometry analysis

Shotgun proteomics aids discovery of novel protein-coding genes, alternative splicing, and "resurrected" pseudogenes in the mouse genome

The Citrobacter rodentium type III secretion system effector EspO affects mucosal damage repair and antimicrobial responses

The OMSSAPercolator: an automated tool to validate OMSSA results.

The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium