List of works - Jonathan M. Keith

A Bayesian Regression Model with Variable Selection for Genome-Wide Association Studies

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard

scientific article

A Generalized Markov Sampler

A comparison of approximate versus exact techniques for Bayesian parameter inference in nonlinear ordinary differential equation models

scientific article published on 11 March 2020

A simulated annealing algorithm for finding consensus sequences

scientific article published in November 2002

Accurate phenotyping: Reconciling approaches through Bayesian model averaging.

scientific article

Adaptive independence samplers

Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs ⬇️

scientific article

Agent-based models of malaria transmission: a systematic review

article

Algorithms for sequence analysis via mutagenesis

scientific article

An optimal sequential procedure for a buying-selling problem with independent observations

Balancing generality and specificity in ecological gradient analysis with species abundance distributions and individual size distributions

scientific article published on 04 November 2016

Bayesian change-point modeling with segmented ARMA model

scientific article published in PLoS ONE

Bayesian inference in estimation of distribution algorithms

Bayesian latent trait modeling of migraine symptom data

scientific article

Bayesian model of signal rewiring reveals mechanisms of gene dysregulation in acquired drug resistance in breast cancer

scientific article published on 13 March 2017

Calculation of IBD probabilities with dense SNP or sequence data

scientific article

Computational characterization of 3' splice variants in the GFAP isoform family

scientific article

Delimiting a species' geographic range using posterior sampling and computational geometry.

scientific article

Delineating slowly and rapidly evolving fractions of the Drosophila genome.

scientific article published in May 2008

Discovery of putative small non-coding RNAs from the obligate intracellular bacterium Wolbachia pipientis

scientific article

Drosophila 3' UTRs are more complex than protein-coding sequences

scientific article

Function regression in ecology and evolution: FREE

article

Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach.

scientific article

How do different aspects of biodiversity change through time? A case study on an Australian bird community

scientific article published in 2016

Identifying Change-Points in Biological Sequences via Sequential Importance Sampling

Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges

scientific article published on 17 May 2020

Investigating genomic structure using changept: A Bayesian segmentation model

scientific article

Linkage and heritability analysis of migraine symptom groupings: a comparison of three different clustering methods on twin data

scientific article

Linking species richness and size diversity in birds and fishes

scientific article published on 03 March 2018

Methods for identifying SNP interactions: a review on variations of Logic Regression, Random Forest and Bayesian logistic regression

scientific article published in November 2011

Model selection in Bayesian segmentation of multiple DNA alignments

scientific article

Multiple evolutionary rate classes in animal genome evolution

scientific article published on 2 December 2009

Parallel cross-entropy optimization

Prediction of signaling cross-talks contributing to acquired drug resistance in breast cancer cells by Bayesian statistical modeling

scientific article published on 20 January 2015

Sampling phylogenetic tree space with the generalized Gibbs sampler

scientific article published on 8 January 2005

Searching for convergence in phylogenetic Markov chain Monte Carlo

scientific article published in August 2006

Segmenting eukaryotic genomes with the Generalized Gibbs Sampler.

scientific article published in September 2006

Sequence Segmentation with changeptGUI.

scientific article published on January 2017

Sequence segmentation

scientific article published on January 2008

Unlocking hidden genomic sequence

scientific article published on 18 February 2004

List of works by Jonathan M. Keith

A Bayesian Regression Model with Variable Selection for Genome-Wide Association Studies

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard

A Generalized Markov Sampler

A comparison of approximate versus exact techniques for Bayesian parameter inference in nonlinear ordinary differential equation models

A simulated annealing algorithm for finding consensus sequences

Accurate phenotyping: Reconciling approaches through Bayesian model averaging.

Adaptive independence samplers

Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs ⬇️

Agent-based models of malaria transmission: a systematic review

Algorithms for sequence analysis via mutagenesis

An optimal sequential procedure for a buying-selling problem with independent observations

Balancing generality and specificity in ecological gradient analysis with species abundance distributions and individual size distributions

Bayesian change-point modeling with segmented ARMA model

Bayesian inference in estimation of distribution algorithms

Bayesian latent trait modeling of migraine symptom data

Bayesian model of signal rewiring reveals mechanisms of gene dysregulation in acquired drug resistance in breast cancer

Calculation of IBD probabilities with dense SNP or sequence data

Computational characterization of 3' splice variants in the GFAP isoform family

Delimiting a species' geographic range using posterior sampling and computational geometry.

Delineating slowly and rapidly evolving fractions of the Drosophila genome.

Discovery of putative small non-coding RNAs from the obligate intracellular bacterium Wolbachia pipientis

Drosophila 3' UTRs are more complex than protein-coding sequences

Function regression in ecology and evolution: FREE

Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach.

How do different aspects of biodiversity change through time? A case study on an Australian bird community

Identifying Change-Points in Biological Sequences via Sequential Importance Sampling

Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges

Investigating genomic structure using changept: A Bayesian segmentation model

Linkage and heritability analysis of migraine symptom groupings: a comparison of three different clustering methods on twin data

Linking species richness and size diversity in birds and fishes

Methods for identifying SNP interactions: a review on variations of Logic Regression, Random Forest and Bayesian logistic regression

Model selection in Bayesian segmentation of multiple DNA alignments

Multiple evolutionary rate classes in animal genome evolution

Parallel cross-entropy optimization

Prediction of signaling cross-talks contributing to acquired drug resistance in breast cancer cells by Bayesian statistical modeling

Sampling phylogenetic tree space with the generalized Gibbs sampler

Searching for convergence in phylogenetic Markov chain Monte Carlo

Segmenting eukaryotic genomes with the Generalized Gibbs Sampler.

Sequence Segmentation with changeptGUI.

Sequence segmentation

Unlocking hidden genomic sequence