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List of works by Yin Chen

A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community

scientific article

A mechanism for bacterial transformation of dimethylsulfide to dimethylsulfoxide: a missing link in the marine organic sulfur cycle

scientific article

A new family of uncultivated bacteria involved in methanogenesis from the ubiquitous osmolyte glycine betaine in coastal saltmarsh sediments

scientific article published on 27 August 2019

A novel class of sulfur-containing aminolipids widespread in marine roseobacters

scientific article published on 09 March 2021

A pathway for chitin oxidation in marine bacteria

scientific article published in 2022

A predator-prey interaction between a marine Pseudoalteromonas sp. and Gram-positive bacteria

scientific article published on 15 January 2020

Acrylate protects a marine bacterium from grazing by a ciliate predator

scientific article published in 2021

Anaerobic choline metabolism in microcompartments promotes growth and swarming of Proteus mirabilis

scientific article published on 24 September 2015

Analysis of Active Methylotrophic Communities: When DNA-SIP Meets High-Throughput Technologies.

scientific article published in January 2016

Applications of DNA-stable isotope probing in bioremediation studies

scientific article published on 01 January 2010

Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase

scientific article

Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave

scientific article (publication date: 2015)

Biogeographic traits of dimethyl sulfide and dimethylsulfoniopropionate cycling in polar oceans

scientific article published on 16 October 2021

Carnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota

scientific article

Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph

scientific article

Communal metabolism by Methylococcaceae and Methylophilaceae is driving rapid aerobic methane oxidation in sediments of a shallow seep near Elba, Italy

scientific article published on 31 July 2019

Comparative Genomics and Mutational Analysis Reveals a Novel XoxF-Utilizing Methylotroph in the Roseobacter Group Isolated From the Marine Environment.

scientific article

Comparative genomics and mutagenesis analyses of choline metabolism in the marine Roseobacter clade

scientific article published on 9 June 2015

Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS).

scientific article published on 28 April 2012

Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2

scientific article

Correction to: Seasonal measurements of the nitrogenous osmolyte glycine betaine in marine temperate coastal waters

scientific article published in 2023

Crystal structures of γ-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine

scientific article published on 16 November 2020

DNA-, RNA-, and Protein-Based Stable-Isotope Probing for High-Throughput Biomarker Analysis of Active Microorganisms.

scientific article

Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment

scholarly article by Eleanor Jameson et al published February 2019 in The ISME Journal

Diversity and activity of methanotrophs in alkaline soil from a Chinese coal mine

scientific article published on 7 May 2009

Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses

scientific article published on 17 December 2007

Elucidation of glutamine lipid biosynthesis in marine bacteria reveals its importance under phosphorus deplete growth in Rhodobacteraceae.

scientific article published on 14 August 2018

Identification and characterization of trimethylamine N-oxide (TMAO) demethylase and TMAO permease in Methylocella silvestris BL2.

scientific article

Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes.

scientific article published in November 2007

Identification of dimethylamine monooxygenase in marine bacteria reveals a metabolic bottleneck in the methylated amine degradation pathway.

scientific article

Identity of active methanotrophs in landfill cover soil as revealed by DNA-stable isotope probing

scientific article published on 20 August 2007

Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave

scientific article

Light-Activated Electron Transfer and Catalytic Mechanism of Carnitine Oxidation by Rieske-type Oxygenase from Human Microbiota

scientific article published on 12 November 2020

Lipid remodelling is a widespread strategy in marine heterotrophic bacteria upon phosphorus deficiency.

scientific article published on 13 November 2015

Magnetic nanoparticle-mediated isolation of functional bacteria in a complex microbial community

scientific article

Manganese Is Essential for PlcP Metallophosphoesterase Activity Involved in Lipid Remodeling in Abundant Marine Heterotrophic Bacteria

scientific article published on 17 July 2018

Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics

scientific article

Metagenomic Analysis of Isotopically Enriched DNA ⬇️

scientific article published on January 1, 2010

Metagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems

scientific article published on 20 September 2016

Methodological considerations for the identification of choline and carnitine-degrading bacteria in the gut

scholarly article by Eleanor Jameson published in October 2018

Methylamine as a nitrogen source for microorganisms from a coastal marine environment.

scientific article published on 28 February 2017

Microbial Trimethylamine Metabolism in Marine Environments

scientific article published on 03 December 2018

Microbiology and Ecology of Methylated Amine Metabolism in Marine Ecosystems

scientific article published on 05 June 2019

Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens

scientific article published on 16 April 2010

Niche-adaptation in plant-associated Bacteroidetes favours specialisation in organic phosphorus mineralisation

scientific article published on 30 November 2020

O2 -independent demethylation of trimethylamine N-oxide by Tdm of Methylocella silvestris.

scientific article published on 19 September 2016

Phosphorus stress induces the synthesis of novel glycolipids in Pseudomonas aeruginosa that confer protection against a last-resort antibiotic

scientific article published on 24 May 2021

Rational design of a tripartite fusion protein of heparinase I enables one-step affinity purification and real-time activity detection ⬇️

scientific article published on October 13, 2012

Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands.

scientific article

Root exudates modify bacterial diversity of phenanthrene degraders in PAH‐polluted soil but not phenanthrene degradation rates ⬇️

scientific article published on November 18, 2010

SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment.

scientific article

Seasonal measurements of the nitrogenous osmolyte glycine betaine in marine temperate coastal waters

scientific article published in 2022

Structural and molecular basis for the substrate positioning mechanism of a new PL7 subfamily alginate lyase from the Arctic

scientific article published on 23 September 2020

Structural basis of carnitine monooxygenase CntA substrate specificity, inhibition and inter-subunit electron transfer

scientific article published on 06 November 2020

Structure of Vibrio collagenase VhaC provides insight into the mechanism of bacterial collagenolysis

scientific article published on 28 January 2022

Towards a systematic understanding of structure-function relationship of dimethylsulfoniopropionate-catabolizing enzymes

scientific article published on 02 April 2019

Trade-offs of lipid remodeling in a marine predator–prey interaction in response to phosphorus limitation

scientific article published in 2022

Transporter characterisation reveals aminoethylphosphonate mineralisation as a key step in the marine phosphorus redox cycle

scientific article published on 27 July 2021

Trimethylamine N-oxide metabolism by abundant marine heterotrophic bacteria.

scientific article published on 03 February 2014

Trimethylamine and trimethylamine N-oxide are supplementary energy sources for a marine heterotrophic bacterium: implications for marine carbon and nitrogen cycling.

scientific article published on 22 August 2014

When metagenomics meets stable-isotope probing: progress and perspectives

scientific article

XoxF encoding an alternative methanol dehydrogenase is widespread in coastal marine environments.

scientific article published on 6 May 2015

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