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List of works by Pierre-Marie Allard

A Mass Spectrometry Based Metabolite Profiling Workflow for Selecting Abundant Specific Markers and Their Structurally Related Multi-Component Signatures in Traditional Chinese Medicine Multi-Herb Formulae

scientific article published on 03 December 2020

A Sample-Centric and Knowledge-Driven Computational Framework for Natural Products Drug Discovery ⬇️

A UHPLC/MS-MS-based HDAC assay applied to bio-guided microfractionation of fungi extracts

A case of fatal acebutolol poisoning: an illustration of the potential of molecular networking

scientific article published on 17 April 2019

A database of high-resolution MS/MS spectra for lichen metabolites

scientific article published on 28 November 2019

Alkyl-Quinolones derivatives as potential biomarkers for Pseudomonas aeruginosa infection chronicity in Cystic Fibrosis

scientific article published on 20 October 2021

Alkylated flavanones from the bark of Cryptocarya chartacea as dengue virus NS5 polymerase inhibitors

scientific article published on 3 November 2011

An interdisciplinary guideline development process: the Clinic on Low-back pain in Interdisciplinary Practice (CLIP) low-back pain guidelines.

scientific article

Anti-Candida Cassane-Type Diterpenoids from the Root Bark of Swartzia simplex.

scientific article published on 11 December 2015

Antiviral chlorinated daphnane diterpenoid orthoesters from the bark and wood of Trigonostemon cherrieri

scientific article published on 29 August 2012

Application of a molecular networking approach for clinical and forensic toxicology exemplified in three cases involving 3-MeO-PCP, doxylamine, and chlormequat

scientific article published on 08 January 2019

Bioactive natural products prioritization using massive multi-informational molecular networks

scientific article

Can molecular networking be a powerful tool to target specific bioactive scaffolds? Case study of New Caledonian Euphorbiaceae species

Characterization, Diversity, and Structure-Activity Relationship Study of Lipoamino Acids from Pantoea sp. and Synthetic Analogues ⬇️

scientific article published on 02 March 2019

Combination of Pseudo-LC-NMR and HRMS/MS-Based Molecular Networking for the Rapid Identification of Antimicrobial Metabolites From Fusarium petroliphilum

scientific article published on 22 October 2021

Comparative genomic and metabolomic study of three <i>Streptomyces</i> sp. differing in biological activity

scientific article published on 30 October 2023

Comparative metabolomic study of fungal foliar endophytes and their long-lived host Astrocaryum sciophilum: a model for exploring the chemodiversity of host-microbe interactions ⬇️

scientific article published on 19 December 2023

Comparative molecular networking analysis of a Rauwolfia plant powder and biological matrices in a fatal ingestion case

scientific article published in 2020

Comparison of Illicit Drug Seizures Products of Natural Origin Using a Molecular Networking Approach

scientific article published on 25 February 2022

Comprehensive mass spectrometric metabolomic profiling of a chemically diverse collection of plants of the Celastraceae family

scientific article published on 22 April 2024

Correction to: A case of fatal acebutolol poisoning: an illustration of the potential of molecular networking

scientific article published on 01 January 2020

Cytotoxic Prenylated Stilbenes Isolated from Macaranga tanarius

scientific article

Deep metabolome annotation in natural products research: towards a virtuous cycle in metabolite identification

scientific article published on 12 January 2017

Discovery of Lipid Peroxidation Inhibitors from Bacopa Species Prioritized through Multivariate Data Analysis and Multi-Informative Molecular Networking

scientific article published on 17 August 2019

Drug Repurposing to Identify a Synergistic High-Order Drug Combination to Treat Sunitinib-Resistant Renal Cell Carcinoma ⬇️

scientific article

Dynamics of Metabolite Induction in Fungal Co-cultures by Metabolomics at Both Volatile and Non-volatile Levels

scientific article published on 5 February 2018

Effects of Sphagnum Leachate on Competitive Sphagnum Microbiome Depend on Species and Time

scientific article published on 06 September 2019

Feature-based molecular networking in the GNPS analysis environment

scientific article published on 24 August 2020

From mass spectral features to molecules in molecular networks: a novel workflow for untargeted metabolomics

scientific article published on 22 December 2021

Functional Traits 2.0: The power of the metabolome for ecology

scientific article published on 12 January 2022

Identification of chemotypes in bitter melon by metabolomics: a plant with potential benefit for management of diabetes in traditional Chinese medicine

scientific article published on 18 July 2019

Insights on the Structural and Metabolic Resistance of Potato (Solanum tuberosum) Cultivars to Tuber Black Dot (Colletotrichum coccodes) ⬇️

scientific article published on 20 August 2020

Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication.

scientific article

Integration of molecular networking & in-silico MS/MS fragmentation: a novel dereplication strategy in natural products chemistry

Integration of molecular networking and in-silico MS/MS fragmentation for sensitive high throughput natural products dereplication

Interest of molecular networking in fundamental, clinical and forensic toxicology: A state-of-the-art review

scholarly article

Inventa: A computational tool to discover structural novelty in natural extracts libraries ⬇️

scientific article published on 11 November 2022

Investigation of an edible TCM bitter melon (Momordica charantia): metabolite profiling, differentiation and characterization

Leaf metabolic traits reveal hidden dimensions of plant form and function

scientific article published in 2023

Lung Cancer Chemopreventive Activity of Patulin Isolated from Penicillium vulpinum

scientific article published on 12 March 2018

MEMO: Mass Spectrometry-Based Sample Vectorization to Explore Chemodiverse Datasets

scientific article published on 13 April 2022

Massive metabolite profiling of natural extracts for a rational prioritization of bioactive natural products: A paradigm shift in pharmacognosy

scientific article published on 27 March 2020

Massive multi-informative molecular networks to mine New-Caledonian chemodiversity for antiviral compounds

Metabolite profiling and targeted isolation of markers for a comprehensive standardisation of a multi-herb TCM formula to treat atopic dermatitis

article

Metabolite profiling of Javanese ginger Zingiber purpureum and identification of antiseizure metabolites via a low-cost open-source zebrafish bioassay-guided isolation

scientific article published on 06 July 2020

Metabolomic- and Molecular Networking-Based Exploration of the Chemical Responses Induced in Citrus sinensis Leaves Inoculated with Xanthomonas citri

scientific article published on 9 November 2022

Metabolomics in Ecology and Bioactive Natural Products Discovery: Challenges and Prospects for a Comprehensive Study of the Specialised Metabolome ⬇️

scientific article published on 30 November 2022

Metabolomics of Myrcia bella Populations in Brazilian Savanna Reveals Strong Influence of Environmental Factors on Its Specialized Metabolism

scientific article published on 26 June 2020

Modern tools to analyse museum samples of curare and psychoactive preparations used by Amazonian tribes

Molecular and Functional Analysis of Sunitinib-Resistance Induction in Human Renal Cell Carcinoma Cells ⬇️

scientific article

Molecular networking approach to detect new analogues of prenylated stilbenes from Macaranga spp

New insights into quetiapine metabolism using molecular networking

scientific article published on 16 November 2020

Novel trophic interactions under climate change promote alpine plant coexistence

scientific article published on 01 December 2020

Open and reusable annotated mass spectrometry dataset of a chemodiverse collection of 1,600 plant extracts ⬇️

scientific article published on 28 December 2022

Peptidomic and transcriptomic profiling of four distinct spider venoms

scientific article

Pharmacognosy in the digital era: shifting to contextualized metabolomics

scientific article

Phytochemical analysis of the methanolic leaves extract of Niedenzuella multiglandulosa (Malpighiaceae), a plant species toxic to cattle in Brazil

scientific article published on 19 March 2020

Phytochemical study of Alzatea verticillata, the sole species belonging to the Alzateaceae family ⬇️

scientific article published on 9 March 2023

Searching for original natural products by molecular networking: detection, isolation and total synthesis of chloroaustralasines

scientific article published in 2018

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

scientific article (publication date: 9 August 2016)

Spatial and evolutionary predictability of phytochemical diversity

scientific article

Surface sensing triggers a broad-spectrum antimicrobial response in Pseudomonas aeruginosa

scientific article published on 23 June 2020

Targeted Isolation of Antibiotic Brominated Alkaloids from the Marine Sponge Pseudoceratina durissima Using Virtual Screening and Molecular Networking

scientific article published on 29 August 2022

Targeted Isolation of Indolopyridoquinazoline Alkaloids from Conchocarpus fontanesianus Based on Molecular Networks

scientific article published on 24 August 2016

Targeted Isolation of Monoterpene Indole Alkaloids from Palicourea sessilis

scientific article published on 9 November 2017

Targeted isolation of natural analogs of anti-mycobacterial hit compounds based on the metabolite profiling of a large collection of plant extracts ⬇️

scientific article published on 12 October 2023

Taxonomically Informed Scoring Enhances Confidence in Natural Products Annotation ⬇️

scientific article published on 25 October 2019

The LOTUS Initiative for Open Natural Products Research: Knowledge Management through Wikidata

scholarly article (preprint) by Adriano Rutz published in March 2021

The LOTUS initiative for open knowledge management in natural products research ⬇️

scholarly article by Adriano Rutz et al. published in May 2022

The plant pathogen triggers a DELLA-dependent seed germination arrest in

article

Thinking big about small beings--the (yet) underdeveloped microbial natural products chemistry in Brazil

scientific article published on 02 April 2014

Towards an efficient and targeted isolation of valuable natural products only

Trigocherrin A, the first natural chlorinated daphnane diterpene orthoester from Trigonostemon cherrieri ⬇️

scientific article published on 19 December 2011

UHPLC-MS-based HDAC Assay Applied to Bio-guided Microfractionation of Fungal Extracts

scientific article published on 5 December 2016

microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data ⬇️

scientific article published in 2024

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