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List of works by Amy K Cain

A CRISPR view of genome sequences.

scientific article published on 11 March 2013

A decade of advances in transposon-insertion sequencing

scientific article published on 12 June 2020

A global genomic approach uncovers novel components for twitching motility-mediated biofilm expansion in Pseudomonas aeruginosa

scientific article published in November 2018

A global genomic approach uncovers novel components for twitching motility-mediated biofilm expansion in Pseudomonas aeruginosa

scientific article published on 19 July 2018

A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae

scientific article published on 20 February 2015

An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria

scientific article published on 23 June 2020

Approaches to querying bacterial genomes with transposon-insertion sequencing

scientific article

Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii

scientific article published in 2019

Comment on: Nucleotide sequence of the chromosomal region conferring multidrug resistance (R-type ASSuT) in Salmonella Typhimurium and monophasic Salmonella Typhimurium strains ⬇️

scientific article published on December 6, 2011

Complete Genome Sequence of Pseudomonas aeruginosa Reference Strain PAK

scientific article published on 10 October 2019

Contrasting patterns of longitudinal population dynamics and antimicrobial resistance mechanisms in two priority bacterial pathogens over 7 years in a single center

scientific article published on 02 September 2019

Defining the ABC of gene essentiality in streptococci

scientific article

Drug resistance in Salmonella enterica ser. Typhimurium bloodstream infection, Malawi.

scientific article published on November 2014

Elucidating essential genes in plant-associated <i>Pseudomonas protegens</i> Pf-5 using transposon insertion sequencing

scientific article published on 30 November 2020

Emergence and evolution of multiply antibiotic-resistant Salmonella enterica serovar Paratyphi B D-tartrate-utilizing strains containing SGI1.

scientific article

Evolution of IncHI2 plasmids via acquisition of transposons carrying antibiotic resistance determinants.

scientific article published on 14 February 2012

Evolution of a multiple antibiotic resistance region in IncHI1 plasmids: reshaping resistance regions in situ.

scientific article published on 10 August 2012

Fluorescence-Based Flow Sorting in Parallel with Transposon Insertion Site Sequencing Identifies Multidrug Efflux Systems in Acinetobacter baumannii

scientific article

Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages

scientific article published on 01 May 2019

Genomic landscape of extended-spectrum β-lactamase resistance in Escherichia coli from an urban African setting

scientific article published on 5 March 2017

High-throughput analysis of gene essentiality and sporulation in Clostridium difficile

scientific article published on 24 February 2015

Identification of Tse8 as a Type VI secretion system toxin from Pseudomonas aeruginosa that targets the bacterial transamidosome to inhibit protein synthesis in prey cells

scientific article published on 19 August 2021

Morphological, genomic and transcriptomic responses of Klebsiella pneumoniae to the last-line antibiotic colistin.

scientific article published on 29 June 2018

Nontoxic Cobalt(III) Schiff Base Complexes with Broad-Spectrum Antifungal Activity

scientific article published on 24 November 2020

O-antigen dependent colicin insensitivity of uropathogenic Escherichia coli

scientific article published on 28 January 2019

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

scientific article published on 11 May 2015

Physical enrichment of transposon mutants from saturation mutant libraries using the TraDISort approach ⬇️

scientific article

Recombination: genomic mix 'n' match

scientific article

Shape-based separation of drug-treated <i>Escherichia coli</i> using viscoelastic microfluidics

scientific article published in 2022

The Murray collection of pre-antibiotic era Enterobacteriacae: a unique research resource

scientific article

The Role of Zinc Efflux during Acinetobacter baumannii Infection

scientific article published on 08 November 2019

The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries

scientific article published on 21 January 2016

The essential genomic landscape of the commensal Bifidobacterium breve UCC2003.

scientific article

The secondary resistome of multidrug-resistant Klebsiella pneumoniae

scientific article

Transposon Insertion Sequencing Elucidates Novel Gene Involvement in Susceptibility and Resistance to Phages T4 and T7 in O157

article

Transposon Tn5393e carrying the aphA1-containing transposon Tn6023 upstream of strAB does not confer resistance to streptomycin.

scientific article published on 24 June 2011

Using genomics to combat infectious diseases on a global scale.

scientific article published on 19 November 2015

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