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List of works by Shivakumar Keerthikumar

A novel community driven software for functional enrichment analysis of extracellular vesicles data.

scientific article

A proteogenomic approach to map the proteome of an unsequenced pathogen – Leishmania donovani ⬇️

scientific article published on March 1, 2012

Age-related decreased inhibitory vs. excitatory gene expression in the adult autistic brain

scientific article published on 8 December 2014

An Introduction to Proteome Bioinformatics

scientific article published on January 2017

Arrestin-Domain Containing Protein 1 (Arrdc1) Regulates the Protein Cargo and Release of Extracellular Vesicles

scientific article published on 20 August 2018

Bioinformatics Tools for Extracellular Vesicles Research.

scientific article published in January 2017

Bovine milk-derived exosomes from colostrum are enriched with proteins implicated in immune response and growth.

scientific article

Colorectal cancer atlas: An integrative resource for genomic and proteomic annotations from colorectal cancer cell lines and tissues.

scientific article

Comprehensive proteomic analysis of human bile ⬇️

scientific article published on November 4, 2011

Deletion of intestinal Hdac3 remodels the lipidome of enterocytes and protects mice from diet-induced obesity

scientific article published on 22 November 2019

Evaluation of protein expression pattern of stanniocalcin 2, insulin-like growth factor-binding protein 7, inhibin beta A and four and a half LIM domains 1 in esophageal squamous cell carcinoma.

scientific article

ExoCarta: A Web-Based Compendium of Exosomal Cargo

scientific article published on October 2015

Extending gene ontology in the context of extracellular RNA and vesicle communication

scientific article published on 12 April 2016

Extracellular vesicles secreted by Saccharomyces cerevisiae are involved in cell wall remodelling

scientific article published on 09 August 2019

FunRich: An open access standalone functional enrichment and interaction network analysis tool

scientific article

Genomewide mRNA profiling of esophageal squamous cell carcinoma for identification of cancer biomarkers.

scientific article

Human Protein Reference Database--2009 update

scientific article (publication date: 2009)

Human intellectual disability genes form conserved functional modules in Drosophila.

scientific article

Inhibition of cathepsin proteases attenuates migration and sensitizes aggressive N-Myc amplified human neuroblastoma cells to doxorubicin.

scientific article published on May 2015

Label-Based and Label-Free Strategies for Protein Quantitation.

scientific article published in January 2017

MTOR signaling orchestrates stress-induced mutagenesis, facilitating adaptive evolution in cancer

scientific article published on 01 June 2020

Multi-substrate Metabolic Tracing Reveals Marked Heterogeneity and Dependency on Fatty Acid Metabolism in Human Prostate Cancer

scientific article published on 27 December 2022

Mutation@A Glance: an integrative web application for analysing mutations from human genetic diseases.

scientific article

NetPath: a public resource of curated signal transduction pathways

scientific article

Network Tools for the Analysis of Proteomic Data

scientific article

Oral administration of bovine milk-derived extracellular vesicles induces senescence in the primary tumor but accelerates cancer metastasis

scientific article published on 24 June 2021

Powerful differential expression analysis incorporating network topology for next-generation sequencing data.

scientific article

Proteogenomic analysis of Candida glabrata using high resolution mass spectrometry.

scientific article published on 13 December 2011

Proteomic Data Storage and Sharing.

scientific article

Proteomic Profiling of Exosomes Secreted by Breast Cancer Cells with Varying Metastatic Potential

scientific article published on 8 November 2017

Proteomics of Human Dendritic Cell Subsets Reveals Subset-Specific Surface Markers and Differential Inflammasome Function

scientific article

Proteotypic Peptides and Their Applications

scientific article published on January 2017

RAPID: Resource of Asian Primary Immunodeficiency Diseases

scientific article published on 08 October 2008

SILAC-based quantitative proteomic approach to identify potential biomarkers from the esophageal squamous cell carcinoma secretome.

scientific article published on 15 October 2010

Systematic Phenomics Analysis Deconvolutes Genes Mutated in Intellectual Disability into Biologically Coherent Modules.

scientific article

Tim29 is a novel subunit of the human TIM22 translocase and is involved in complex assembly and stability

scientific journal article

Unassigned MS/MS Spectra: Who Am I?

scientific article published on January 2017

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