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List of works by Leonardo Collado-Torres

Altered expression of histamine signaling genes in autism spectrum disorder

scientific article published on 9 May 2017

Characterizing the dynamic and functional DNA methylation landscape in the developing human cortex

scientific article published on 30 June 2020

Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods

article

Developmental and genetic regulation of the human cortex transcriptome illuminate schizophrenia pathogenesis

scientific article published on 26 July 2018

Developmental effects of maternal smoking during pregnancy on the human frontal cortex transcriptome

scientific article published on 21 August 2018

Developmental regulation of human cortex transcription and its clinical relevance at single base resolution

scientific article

Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs

scientific article published on 23 January 2020

Flexible expressed region analysis for RNA-seq with derfinder

scientific article published on 29 September 2016

Flexible expressed region analysis for RNA-seq with derfinder

scholarly article published 19 February 2015

Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk

scientific article published on 02 September 2021

Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive

scientific article

Improving the value of public RNA-seq expression data by phenotype prediction.

scientific article published in May 2018

Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders

scientific article published on 10 June 2020

Interspecies interactions that result in Bacillus subtilis forming biofilms are mediated mainly by members of its own genus.

scientific article

Profiling gene expression in the human dentate gyrus granule cell layer reveals insights into schizophrenia and its genetic risk

scientific article published on 16 March 2020

Recounting the FANTOM CAGEAssociated Transcriptome

scientific article published on 20 February 2020

Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information

scientific article published on 25 February 2020

RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)

scientific article

Reproducible RNA-seq analysis using recount2.

scientific article

SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses

scientific article published on 01 May 2021

SynGAP isoforms differentially regulate synaptic plasticity and dendritic development

scientific article published on 24 June 2020

Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex

scientific article published on 08 February 2021

recount workflow: Accessing over 70,000 human RNA-seq samples with Bioconductor

scientific article published on 24 August 2017

recount-brain: a curated repository of human brain RNA-seq datasets metadata

scholarly article published 24 April 2019

regionReport: Interactive reports for region-level and feature-level genomic analyses

scientific article published on May 2015

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

scientific article published in 2022

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