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List of works by Stephanie J Spielman

Causes of evolutionary rate variation among protein sites

scientific article

Comprehensive, structurally-informed alignment and phylogeny of vertebrate biogenic amine receptors

scientific article published on 17 February 2015

Datamonkey 2.0: a modern web application for characterizing selective and other evolutionary processes

scientific article published on 2 January 2018

Extensively Parameterized Mutation-Selection Models Reliably Capture Site-Specific Selective Constraint

scientific article published on 10 August 2016

Geological Factors Impacted Cadmium Availability and use as an Alternative Cofactor for Zinc in the Carbon Fixation Pathways of Marine Diatoms

scientific article published in February 2021

Increased evolutionary rate in the 2014 West African Ebola outbreak is due to transient polymorphism and not positive selection

Limited utility of residue masking for positive-selection inference

scientific article

Maximum allowed solvent accessibilites of residues in proteins

scientific article

Membrane Environment Imposes Unique Selection Pressures on Transmembrane Domains of G Protein-Coupled Receptors ⬇️

scientific article published on January 26, 2013

Mineral Element Insiders and Outliers Play Crucial Roles in Biological Evolution

scientific article published on 24 June 2022

Pyvolve: A Flexible Python Module for Simulating Sequences along Phylogenies

scientific article published on 23 September 2015

Relative evolutionary rate inference in HyPhy with LEISR.

scientific article published on 5 February 2018

The evolving redox chemistry and bioavailability of vanadium in deep time

scientific article published on 12 February 2020

The relationship between dN/dS and scaled selection coefficients

scientific article

Time dependence of evolutionary metrics during the 2009 pandemic influenza virus outbreak.

scientific article

phyphy: Python package for facilitating the execution and parsing of HyPhy standard analyses

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