List of works - Nathalie Niquil

A new modeling approach to define marine ecosystems food-web status with uncertainty assessment

A probabilistic approach of flow-balanced network based on Markov chains

scientific article published in 2006

A toolbox to evaluate data reliability for whole-ecosystem models: Application on the Bay of Biscay continental shelf food-web model

scholarly article by Géraldine Lassalle et al published August 2014 in Ecological Modelling

An assessment of the trophic structure of the Bay of Biscay continental shelf food web: Comparing estimates derived from an ecosystem model and isotopic data

article

An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study

article by Géraldine Lassalle et al published 28 March 2012 in I C E S Journal of Marine Science

Bacterivory by benthic organisms in sediment: Quantification using15N-enriched bacteria

scientific article published in 2008

Bacterivory in the common foraminifer Ammonia tepida: Isotope tracer experiment and the controlling factors

scientific article published in 2008

Bacterivory of a mudflat nematode community under different environmental conditions

scientific article published in 2008

Benthic and fish aggregation inside an offshore wind farm: Which effects on the trophic web functioning?

scientific article published in 2017

Carbon steady-state model of the planktonic food web of Lake Biwa, Japan

scientific article published in August 2006

Characterization of the planktonic food web of Takapoto Atoll lagoon, using network analysis

scientific article published on 01 February 1999

Combining quantitative and qualitative models to identify functional groups for monitoring changes in the Bay of Biscay continental shelf exploited foodweb

scientific article published in 2013

Comparative analysis of the food webs of two intertidal mudflats during two seasons using inverse modelling: Aiguillon Cove and Brouage Mudflat, France

article

Does the study of microzooplankton community size structure effectively define their dynamics? Investigation in the Bay of Biscay (France)

article

Ecosystem status and functioning: searching for rules of thumb using an intersite comparison of food-web models of Northeast Atlantic continental shelves

scientific article published in 2012

Editorial: ‘Disregarded’ microbial diversity and ecological potentials in aquatic systems: a new paradigm shift ahead

Eutrophication and trophic structure in response to the presence of the eelgrass Zostera noltii

scientific article published in 2009

Evaluating ecosystem-level anthropogenic impacts in a stressed transitional environment: The case of the Seine estuary

scientific article published in 2016

Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing.

scientific article

Food web indicators under the Marine Strategy Framework Directive: From complexity to simplicity?

scientific article published in 2013

From species distributions to ecosystem structure and function: A methodological perspective

scientific article published in 2016

Functional effects of parasites on food web properties during the spring diatom bloom in Lake Pavin: a linear inverse modeling analysis

scientific article

How does the resuspension of the biofilm alter the functioning of the benthos–pelagos coupled food web of a bare mudflat in Marennes-Oléron Bay (NE Atlantic)?

scholarly article by Blanche Saint-Béat published in September 2014

Hydrothermal Fe cycling and deep ocean organic carbon scavenging: Model-based evidence for significant POC supply to seafloor sediments

article

Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators

scientific article published in 2015

Incorporation of diet information derived from Bayesian stable isotope mixing models into mass-balanced marine ecosystem models: A case study from the Marennes-Oléron Estuary, France

article

Influence of environment factors on bacterial ingestion rate of the deposit-feeder Hydrobia ulvae and comparison with meiofauna

Influence of planktonic foodweb structure on a system's capacity to support pelagic production: an inverse analysis approach

scientific article published in 2011

Interspecific competition between freshwater snails of medical importance: a Venezuelan example

scientific article published on 01 February 2001

Inverse analysis of the planktonic food web dynamics related to phytoplankton bloom development on the continental shelf of the Bay of Biscay, French coast

article

Inverse model analysis of the planktonic food web of Takapoto Atoll (French Polynesia)

article

Key features of intertidal food webs that support migratory shorebirds

scientific article

Large-scale regional comparisons of ecosystem processes: Methods and approaches

Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management

Microbial parasites make cyanobacteria blooms less of a trophic dead end than commonly assumed

scientific article published on 7 February 2018

Modelling the effects of eutrophication, mitigation measures and an extreme flood event on estuarine benthic food webs

scientific article published in 2011

Network analysis and inter-ecosystem comparison of two intertidal mudflat food webs (Brouage Mudflat and Aiguillon Cove, SW France)

article

Network analysis of the planktonic food web during the spring bloom in a semi enclosed lagoon (Arcachon, SW France)

article

Numerical analysis of the food web of an intertidal mudflat ecosystem on the Atlantic coast of France

article

Parasitic chytrids sustain zooplankton growth during inedible algal bloom.

scientific article

Phytoplankton chytridiomycosis: community structure and infectivity of fungal parasites in aquatic ecosystems.

scientific article

Planktonic food webs revisited: Reanalysis of results from the linear inverse approach

Potential role of fungi in plankton food web functioning and stability: a simulation analysis based on Lake Biwa inverse model

scientific article published on 12 June 2010

Preface

Preface B

scientific article published in 2012

Reaction of an estuarine food web to disturbance: Lindeman’s perspective

scientific article published in 2014

Shifting levels of ecological network's analysis reveals different system properties

scientific article published on 24 February 2020

Spatial and long-term changes in the functional and structural phytoplankton communities along the French Atlantic coast

article

The effect of physical drivers on ecosystem indices derived from ecological network analysis: Comparison across estuarine ecosystems

scientific article published in 2012

The effects of aggregation on the performance of the inverse method and indicators of network analysis

scientific article published in 2009

The mean function provides robustness to linear inverse modelling flow estimation in food webs: A comparison of functions derived from statistics and ecological theories

scientific article published in 2013

The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis

scientific article published in 2015

The plankton food web of the Bizerte Lagoon (South-western Mediterranean): II. Carbon steady-state modelling using inverse analysis

scientific article published in 2008

The planktonic food web of the Bizerte lagoon (south-western Mediterranean) during summer: I. Spatial distribution under different anthropogenic pressures

article

Towards ecosystem-based management: identifying operational food-web indicators for marine ecosystems

scientific article published in 2017

Trophic importance of microphytobenthos and bacteria to meiofauna in soft-bottom intertidal habitats: A combined trophic marker approach

scientific article published on 22 May 2019

Trophic networks: How do theories link ecosystem structure and functioning to stability properties? A review

article

Uses of Innovative Modeling Tools within the Implementation of the Marine Strategy Framework Directive

Using ecological models to assess ecosystem status in support of the European Marine Strategy Framework Directive

article

What Is Marine Biodiversity? Towards Common Concepts and Their Implications for Assessing Biodiversity Status

article published in 2016

Zooplankton community structure in a highly turbid environment (Charente estuary, France): Spatio-temporal patterns and environmental control

article

delta(15)N and delta(13)C in the Mondego estuary food web: seasonal variation in producers and consumers

scientific article

List of works by Nathalie Niquil

A new modeling approach to define marine ecosystems food-web status with uncertainty assessment

A probabilistic approach of flow-balanced network based on Markov chains

A toolbox to evaluate data reliability for whole-ecosystem models: Application on the Bay of Biscay continental shelf food-web model

An assessment of the trophic structure of the Bay of Biscay continental shelf food web: Comparing estimates derived from an ecosystem model and isotopic data

An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study

Bacterivory by benthic organisms in sediment: Quantification using15N-enriched bacteria

Bacterivory in the common foraminifer Ammonia tepida: Isotope tracer experiment and the controlling factors

Bacterivory of a mudflat nematode community under different environmental conditions

Benthic and fish aggregation inside an offshore wind farm: Which effects on the trophic web functioning?

Carbon steady-state model of the planktonic food web of Lake Biwa, Japan

Characterization of the planktonic food web of Takapoto Atoll lagoon, using network analysis

Combining quantitative and qualitative models to identify functional groups for monitoring changes in the Bay of Biscay continental shelf exploited foodweb

Comparative analysis of the food webs of two intertidal mudflats during two seasons using inverse modelling: Aiguillon Cove and Brouage Mudflat, France

Does the study of microzooplankton community size structure effectively define their dynamics? Investigation in the Bay of Biscay (France)

Ecosystem status and functioning: searching for rules of thumb using an intersite comparison of food-web models of Northeast Atlantic continental shelves

Editorial: ‘Disregarded’ microbial diversity and ecological potentials in aquatic systems: a new paradigm shift ahead

Eutrophication and trophic structure in response to the presence of the eelgrass Zostera noltii

Evaluating ecosystem-level anthropogenic impacts in a stressed transitional environment: The case of the Seine estuary

Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing.

Food web indicators under the Marine Strategy Framework Directive: From complexity to simplicity?

From species distributions to ecosystem structure and function: A methodological perspective

Functional effects of parasites on food web properties during the spring diatom bloom in Lake Pavin: a linear inverse modeling analysis

How does the resuspension of the biofilm alter the functioning of the benthos–pelagos coupled food web of a bare mudflat in Marennes-Oléron Bay (NE Atlantic)?

Hydrothermal Fe cycling and deep ocean organic carbon scavenging: Model-based evidence for significant POC supply to seafloor sediments

Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators

Incorporation of diet information derived from Bayesian stable isotope mixing models into mass-balanced marine ecosystem models: A case study from the Marennes-Oléron Estuary, France

Influence of environment factors on bacterial ingestion rate of the deposit-feeder Hydrobia ulvae and comparison with meiofauna

Influence of planktonic foodweb structure on a system's capacity to support pelagic production: an inverse analysis approach

Interspecific competition between freshwater snails of medical importance: a Venezuelan example

Inverse analysis of the planktonic food web dynamics related to phytoplankton bloom development on the continental shelf of the Bay of Biscay, French coast

Inverse model analysis of the planktonic food web of Takapoto Atoll (French Polynesia)

Key features of intertidal food webs that support migratory shorebirds

Large-scale regional comparisons of ecosystem processes: Methods and approaches

Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management

Microbial parasites make cyanobacteria blooms less of a trophic dead end than commonly assumed

Modelling the effects of eutrophication, mitigation measures and an extreme flood event on estuarine benthic food webs

Network analysis and inter-ecosystem comparison of two intertidal mudflat food webs (Brouage Mudflat and Aiguillon Cove, SW France)

Network analysis of the planktonic food web during the spring bloom in a semi enclosed lagoon (Arcachon, SW France)

Numerical analysis of the food web of an intertidal mudflat ecosystem on the Atlantic coast of France

Parasitic chytrids sustain zooplankton growth during inedible algal bloom.

Phytoplankton chytridiomycosis: community structure and infectivity of fungal parasites in aquatic ecosystems.

Planktonic food webs revisited: Reanalysis of results from the linear inverse approach

Potential role of fungi in plankton food web functioning and stability: a simulation analysis based on Lake Biwa inverse model

Preface

Preface B

Reaction of an estuarine food web to disturbance: Lindeman’s perspective

Shifting levels of ecological network's analysis reveals different system properties

Spatial and long-term changes in the functional and structural phytoplankton communities along the French Atlantic coast

The effect of physical drivers on ecosystem indices derived from ecological network analysis: Comparison across estuarine ecosystems

The effects of aggregation on the performance of the inverse method and indicators of network analysis

The mean function provides robustness to linear inverse modelling flow estimation in food webs: A comparison of functions derived from statistics and ecological theories

The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis

The plankton food web of the Bizerte Lagoon (South-western Mediterranean): II. Carbon steady-state modelling using inverse analysis

The planktonic food web of the Bizerte lagoon (south-western Mediterranean) during summer: I. Spatial distribution under different anthropogenic pressures

Towards ecosystem-based management: identifying operational food-web indicators for marine ecosystems

Trophic importance of microphytobenthos and bacteria to meiofauna in soft-bottom intertidal habitats: A combined trophic marker approach

Trophic networks: How do theories link ecosystem structure and functioning to stability properties? A review

Uses of Innovative Modeling Tools within the Implementation of the Marine Strategy Framework Directive

Using ecological models to assess ecosystem status in support of the European Marine Strategy Framework Directive

What Is Marine Biodiversity? Towards Common Concepts and Their Implications for Assessing Biodiversity Status

Zooplankton community structure in a highly turbid environment (Charente estuary, France): Spatio-temporal patterns and environmental control

delta(15)N and delta(13)C in the Mondego estuary food web: seasonal variation in producers and consumers

Étude du réseau et de la capacité trophique dˈun lagon dˈatoll (Takapoto, Polynésie française) par rapport à lˈhuître perlière