List of works - Fergal Duffy

A Serum Circulating miRNA Signature for Short-Term Risk of Progression to Active Tuberculosis Among Household Contacts

scientific article published on 13 April 2018

Computational Opportunities and Challenges in Finding Cyclic Peptide Modulators of Protein-Protein Interactions

scientific article published on 01 January 2019

Computational approaches to developing short cyclic peptide modulators of protein-protein interactions

scientific article

Computational survey of peptides derived from disulphide-bonded protein loops that may serve as mediators of protein-protein interactions

scientific article

Contained Mycobacterium tuberculosis infection induces concomitant and heterologous protection

scientific article published on 16 July 2020

CycloPs: Generating Virtual Libraries of Cyclized and Constrained Peptides Including Nonnatural Amino Acids ⬇️

scientific article published on March 24, 2011

Detection of Tuberculosis Recurrence, Diagnosis and Treatment Response by a Blood Transcriptomic Risk Signature in HIV-Infected Persons on Antiretroviral Therapy

scientific article published on 26 June 2019

Early whole blood transcriptional responses to radiation-attenuated Plasmodium falciparum sporozoite vaccination in malaria naïve and malaria pre-exposed adult volunteers

scientific article published on 09 July 2021

Four-gene Pan-African Blood Signature Predicts Progression to Tuberculosis

scientific article published on 6 April 2018

GlycoProfileAssigner: automated structural assignment with error estimation for glycan LC data

scientific article

Immunometabolic Signatures Predict Risk of Progression to Active Tuberculosis and Disease Outcome

scientific article published on 22 March 2019

Linking EPCR-Binding PfEMP1 to Brain Swelling in Pediatric Cerebral Malaria.

scientific article published on 23 October 2017

Meta-analysis of Plasmodium falciparum Signatures Contributing to Severe Malaria in African Children and Indian Adults

scientific article published on 30 April 2019

Metabolite changes in blood predict the onset of tuberculosis

scientific article published in Nature Communications

Multinomial modelling of TB/HIV co-infection yields a robust predictive signature and generates hypotheses about the HIV+TB+ disease state

scientific article published on 15 July 2019

Predicting binding within disordered protein regions to structurally characterised peptide-binding domains

scientific article

TIN-a combinatorial compound collection of synthetically feasible multicomponent synthesis products

scientific article

Use of a Contained Mycobacterium tuberculosis Mouse Infection Model to Predict Active Disease and Containment in Humans

scientific article published on 01 May 2022

Virtual screening using combinatorial cyclic peptide libraries reveals protein interfaces readily targetable by cyclic peptides.

scientific article published on 20 February 2015

List of works by Fergal Duffy

A Serum Circulating miRNA Signature for Short-Term Risk of Progression to Active Tuberculosis Among Household Contacts

Computational Opportunities and Challenges in Finding Cyclic Peptide Modulators of Protein-Protein Interactions

Computational approaches to developing short cyclic peptide modulators of protein-protein interactions

Computational survey of peptides derived from disulphide-bonded protein loops that may serve as mediators of protein-protein interactions

Contained Mycobacterium tuberculosis infection induces concomitant and heterologous protection

CycloPs: Generating Virtual Libraries of Cyclized and Constrained Peptides Including Nonnatural Amino Acids ⬇️

Detection of Tuberculosis Recurrence, Diagnosis and Treatment Response by a Blood Transcriptomic Risk Signature in HIV-Infected Persons on Antiretroviral Therapy

Early whole blood transcriptional responses to radiation-attenuated Plasmodium falciparum sporozoite vaccination in malaria naïve and malaria pre-exposed adult volunteers

Four-gene Pan-African Blood Signature Predicts Progression to Tuberculosis

GlycoProfileAssigner: automated structural assignment with error estimation for glycan LC data

Immunometabolic Signatures Predict Risk of Progression to Active Tuberculosis and Disease Outcome

Linking EPCR-Binding PfEMP1 to Brain Swelling in Pediatric Cerebral Malaria.

Meta-analysis of Plasmodium falciparum Signatures Contributing to Severe Malaria in African Children and Indian Adults

Metabolite changes in blood predict the onset of tuberculosis

Multinomial modelling of TB/HIV co-infection yields a robust predictive signature and generates hypotheses about the HIV+TB+ disease state

Predicting binding within disordered protein regions to structurally characterised peptide-binding domains

TIN-a combinatorial compound collection of synthetically feasible multicomponent synthesis products

Use of a Contained Mycobacterium tuberculosis Mouse Infection Model to Predict Active Disease and Containment in Humans

Virtual screening using combinatorial cyclic peptide libraries reveals protein interfaces readily targetable by cyclic peptides.