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List of works by Francois Sabot

A Transposon Story: From TE Content to TE Dynamic Invasion of Drosophila Genomes Using the Single-Molecule Sequencing Technology from Oxford Nanopore

scientific article published on 25 July 2020

A knowledge-based molecular screen uncovers a broad-spectrum OsSWEET14 resistance allele to bacterial blight from wild rice.

scientific article

A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives.

scientific article published on 4 August 2016

A unified classification system for eukaryotic transposable elements

scientific article (publication date: December 2007)

Advent of a new retrotransposon structure: the long form of the Veju elements.

scientific article

Assessment of Genetic Diversity of Rice in Registered Cultivars and Farmers’ Fields in Burkina Faso

scientific article published in 2021

Comparison of two African rice species through a new pan-genomic approach on massive data

Contrasted microcolinearity and gene evolution within a homoeologous region of wheat and barley species

scientific article published on 15 February 2008

DNA methylation and expression of the EgDEF1 gene and neighboring retrotransposons in mantled somaclonal variants of oil palm.

scientific article

De Novo Assemblies of Three Oryza glaberrima Accessions Provide First Insights about Pan-Genome of African Rices

scientific article published on January 2017

Evolutionary forces affecting synonymous variations in plant genomes.

scientific article

FrangiPANe, a tool for creating a panreference using left behind reads

scientific article published in 2023

Identification of an active LTR retrotransposon in rice.

scientific article published on 2 February 2009

Life without GAG: the BARE-2 retrotransposon as a parasite's parasite.

scientific article published on 4 October 2006

Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats

scientific article

Molecular basis of evolutionary events that shaped the hardness locus in diploid and polyploid wheat species (Triticum and Aegilops).

scientific article

MooSciTIC: Training of trainers in West African research and higher education.

scientific article published on 7 June 2019

Morgane, a new LTR retrotransposon group, and its subfamilies in wheats

scientific article published on 01 September 2006

On the importance of metadata when sharing and opening data

scientific article published in 2022

Sequencing of the Triticum monococcum hardness locus reveals good microcolinearity with rice

scientific article published on 11 March 2004

TOGGLE: toolbox for generic NGS analyses.

scientific article published on 9 November 2015

Template switching can create complex LTR retrotransposon insertions in Triticeae genomes.

scientific article

Ten simple rules for developing visualization tools in genomics

scientific article published in 2022

Ten simple rules for switching from face-to-face to remote conference: An opportunity to estimate the reduction in GHG emissions

scientific article published on 18 October 2021

The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes

scientific article published on 05 July 2018

The genome of Theobroma cacao

scientific article

Tos17 rice element: incomplete but effective

scientific article published on April 2014

Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (Oryza glaberrima).

scientific article published on 18 April 2014

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data.

scientific article

Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae.

scientific article

miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species

scientific article

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