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List of works by Omer Gokcumen

A highly annotated whole-genome sequence of a Korean individual

scientific article

An Evolutionary Perspective on the Impact of Genomic Copy Number Variation on Human Health

scientific article published on 14 September 2019

An evolutionary transcriptomics approach links CD36 to membrane remodeling in replicative senescence

An evolutionary transcriptomics approach links CD36 to membrane remodeling in replicative senescence

scientific article published on 01 August 2018

Analysis of somatic retrotransposition in human cancers.

scientific article

Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division

scientific article (publication date: December 2013)

Archaic Hominin Introgression in Africa Contributes to Functional Salivary MUC7 Genetic Variation.

scientific article

Archaic hominin introgression into modern human genomes

scientific article published on 08 November 2019

Atopic Dermatitis Susceptibility Variants in Filaggrin Hitchhike Hornerin Selective Sweep.

scientific article published on 27 September 2016

Balancing selection on a regulatory region exhibiting ancient variation that predates human-neandertal divergence

scientific article

Complex Haplotypes of GSTM1 Gene Deletions Harbor Signatures of a Selective Sweep in East Asian Populations

scientific article published on 30 August 2018

Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees.

scientific article published on 25 April 2018

Copy number variants (CNVs) in primate species using array-based comparative genomic hybridization.

scientific article published on 21 June 2009

Discovery of common Asian copy number variants using integrated high-resolution array CGH and massively parallel DNA sequencing

scientific article published on 4 April 2010

Evolutionary context of psoriatic immune skin response

scientific article published on 01 December 2021

Exploring the role of copy number variants in human adaptation

scientific article

Extensive genetic diversity and substructuring among zebrafish strains revealed through copy number variant analysis.

scientific article published on 27 December 2011

Extensive genomic and transcriptional diversity identified through massively parallel DNA and RNA sequencing of eighteen Korean individuals

scientific article published on 3 July 2011

Filamentation Regulatory Pathways Control Adhesion-Dependent Surface Responses in Yeast

scientific article published on 03 May 2019

Genetic variation in the enigmatic Altaian Kazakhs of South-Central Russia: insights into Turkic population history

scientific article published in July 2008

Geographic distribution and adaptive significance of genomic structural variants: an anthropological genetics perspective.

scientific article published on October 2014

Global Survey of Variation in a Human Olfactory Receptor Gene Reveals Signatures of Non-Neutral Evolution.

scientific article

Human and Nonhuman Primate Lineage-Specific Footprints in the Salivary Proteome

scientific article published on 01 February 2020

Impact of constitutional copy number variants on biological pathway evolution

scientific article

Independent amylase gene copy number bursts correlate with dietary preferences in mammals

article

Landscape of somatic retrotransposition in human cancers

scientific article (publication date: 24 August 2012)

Loss-of-function tolerance of enhancers in the human genome

scientific article published on 03 April 2020

Mitochondrial DNA and Y Chromosome Variation Provides Evidence for a Recent Common Ancestry between Native Americans and Indigenous Altaians

Mitochondrial DNA and Y chromosome variation provides evidence for a recent common ancestry between Native Americans and Indigenous Altaians

scientific article

Next-generation sequencing-based detection of germline L1-mediated transductions

scientific article

Origins and functional impact of copy number variation in the human genome

scientific article (publication date: April 2010)

Primate genome architecture influences structural variation mechanisms and functional consequences

scientific article

Recent evolution of the salivary mucin MUC7.

scientific article published on 25 August 2016

Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection.

scientific article published on 31 May 2011

Regulation of lipids is central to replicative senescence

scientific article published on 27 January 2017

Regulatory element copy number differences shape primate expression profiles.

scientific article

Segmental duplications and evolutionary acquisition of UV damage response in the SPATA31 gene family of primates and humans

scientific article

Sex-specific phenotypic effects and evolutionary history of an ancient polymorphic deletion of the human growth hormone receptor

scientific article published on 24 September 2021

The evolution and functional impact of human deletion variants shared with archaic hominin genomes

scientific article published on 2 January 2015

The psoriasis-associated deletion of late cornified envelope genes LCE3B and LCE3C has been maintained under balancing selection since Human Denisovan divergence.

scientific article

VCFtoTree: a user-friendly tool to construct locus-specific alignments and phylogenies from thousands of anthropologically relevant genome sequences.

scientific article published on 26 September 2017

Variation and functional impact of Neanderthal ancestry in Western Asia

scientific article

Vif proteins from diverse primate lentiviral lineages use the same binding site in APOBEC3G

scientific article published on 28 August 2013

Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa

scientific article

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