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List of works by David F Burke

A novel type of deubiquitinating enzyme

scientific article (publication date: 20 June 2003)

A recommended numbering scheme for influenza A HA subtypes

scientific article

A review of influenza haemagglutinin receptor binding as it relates to pandemic properties

scientific article

A structural bioinformatics approach to the analysis of nonsynonymous single nucleotide polymorphisms (nsSNPs) and their relation to disease.

scientific article published in December 2007

A structural biology community assessment of AlphaFold 2 applications

A structural biology community assessment of AlphaFold2 applications

scientific article published in 2022

Ab initio construction of polypeptide fragments: Accuracy of loop decoy discrimination by an all-atom statistical potential and the AMBER force field with the Generalized Born solvation model

scientific article published in April 2003

Airborne transmission of influenza A/H5N1 virus between ferrets

scientific article (publication date: 22 June 2012)

Amino Acid Substitutions That Affect Receptor Binding and Stability of the Hemagglutinin of Influenza A/H7N9 Virus

scientific article published on 20 January 2016

Andante: reducing side-chain rotamer search space during comparative modeling using environment-specific substitution probabilities

scientific article published on 6 March 2007

Antigenic Drift of the Influenza A(H1N1)pdm09 Virus Neuraminidase Results in Reduced Effectiveness of A/California/7/2009 (H1N1pdm09)-Specific Antibodies

scientific article published in 2019

Antigenic and Genetic Evolution of Equine Influenza A (H3N8) Virus from 1968 to 2007 ⬇️

scientific article published on September 21, 2011

Antigenic characterization of highly pathogenic avian influenza A(H5N1) viruses with chicken and ferret antisera reveals clade-dependent variation in hemagglutination inhibition profiles.

scientific article

Antigenic variation of clade 2.1 H5N1 virus is determined by a few amino acid substitutions immediately adjacent to the receptor binding site

scientific article

CAMPASS: a database of structurally aligned protein superfamilies ⬇️

scientific article published on September 15, 1998

Characterization of influenza A(H1N1)pdm09 viruses isolated from Nepalese and Indian outbreak patients in early 2015.

scientific article published on 9 August 2017

Characterizing Emerging Canine H3 Influenza Viruses

scientific article published on 14 April 2020

Circulating avian influenza viruses closely related to the 1918 virus have pandemic potential.

scientific article

Circulation of reassortant influenza A(H7N9) viruses in poultry and humans, Guangdong Province, China, 2013.

scientific article

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms

scientific article published on 15 October 2020

Comparative modelling by restraint-based conformational sampling

scientific article

Correction for Koel et al., Antigenic Variation of Clade 2.1 H5N1 Virus Is Determined by a Few Amino Acid Substitutions Immediately Adjacent to the Receptor Binding Site.

scientific article published on 12 August 2014

Crystal structure of fibroblast growth factor receptor ectodomain bound to ligand and heparin

scientific article

Discordant antigenic drift of neuraminidase and hemagglutinin in H1N1 and H3N2 influenza viruses

scientific article

Epistatic interactions can moderate the antigenic effect of substitutions in haemagglutinin of influenza H3N2 virus

scientific article published on 24 April 2019

Fibroblast growth factor receptors: lessons from the genes

scientific journal article

Identification of amino acid substitutions supporting antigenic change of influenza A(H1N1)pdm09 viruses.

scientific article

Influenza Research Database: An integrated bioinformatics resource for influenza virus research.

scientific article published on 26 September 2016

Limited airborne transmission of H7N9 influenza A virus between ferrets

scientific article published on 07 August 2013

PROVAT: a tool for Voronoi tessellation analysis of protein structures and complexes.

scientific article

Plasticity of amino acid residue 145 near the receptor binding site of H3 swine influenza A viruses and its impact on receptor binding and antibody recognition

scientific article published on 04 January 2019

Polymorphisms at amino acid residues 141 and 154 influence conformational variation in ovine PrP.

scientific article published on 14 July 2014

Quantifying the fitness advantage of polymerase substitutions in Influenza A/H7N9 viruses during adaptation to humans

scientific article

Selection of antigenically advanced variants of seasonal influenza viruses

scientific article

Sequence-structure homology recognition by iterative alignment refinement and comparative modeling.

scientific article

Structural biology and bioinformatics in drug design: opportunities and challenges for target identification and lead discovery

scientific article

Structural differences between allelic variants of the ovine prion protein revealed by molecular dynamics simulations

article

Structure of a glycosylphosphatidylinositol-anchored domain from a trypanosome variant surface glycoprotein

scientific article

Substitutions near the hemagglutinin receptor-binding site determine the antigenic evolution of influenza A H3N2 viruses in U.S. swine

scientific article published on 12 February 2014

Substitutions near the receptor binding site determine major antigenic change during influenza virus evolution

scientific article

The Molecular Basis for Antigenic Drift of Human A/H2N2 Influenza Viruses

scientific article published on 03 April 2019

The global antigenic diversity of swine influenza A viruses

scientific article

The potential for respiratory droplet-transmissible A/H5N1 influenza virus to evolve in a mammalian host

scientific article

The role of heparin in the complex formation between fibroblast growth factor 2 and its high affinity receptor: comparative modelling and biochemical studies ⬇️

scientific article published on 01 August 1998

The stability and aggregation of ovine prion protein associated with classical and atypical scrapie correlates with the ease of unwinding of helix-2

scientific article published on 01 January 2008

Virulence-associated substitution D222G in the hemagglutinin of 2009 pandemic influenza A(H1N1) virus affects receptor binding

scientific article

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