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List of works by Rowena A Bull

A bioinformatics pipeline for the analyses of viral escape dynamics and host immune responses during an infection

scientific article

A method for near full-length amplification and sequencing for six hepatitis C virus genotypes

scientific article

A molecular transmission network of recent hepatitis C infection in people with and without HIV: Implications for targeted treatment strategies

scientific article published on 24 November 2016

Accurate single nucleotide variant detection in viral populations by combining probabilistic clustering with a statistical test of strand bias

scientific article

Amplification and next generation sequencing of near full-length human enteroviruses for identification and characterisation from clinical samples

scientific article published in Scientific Reports

Analysis of resistance-associated substitutions in acute hepatitis C virus infection by deep sequencing across six genotypes and three continents.

scientific article

Broadly neutralizing antibodies from an individual that naturally cleared multiple hepatitis C virus infections uncover molecular determinants for E2 targeting and vaccine design

scientific article published on 17 May 2019

Bug breakfast in the Bulletin: Gastroenteritis outbreaks in institutions

scientific article published on 01 November 2010

Chemokine-regulated recruitment of antigen-specific T cell sub-populations to the liver in acute and chronic hepatitis C infection

scientific article published on 01 April 2019

Clonally diverse CD38+HLA-DR+CD8+ T cells persist during fatal H7N9 disease.

scientific article published on 26 February 2018

Comparison of influenza virus replication fidelity in vitro using selection pressure with monoclonal antibodies

scientific article published in June 2013

Comparison of the replication properties of murine and human calicivirus RNA-dependent RNA polymerases.

scientific article published on 20 October 2010

Contribution of intra- and interhost dynamics to norovirus evolution

scientific article published on 28 December 2011

Correlation of polymerase replication fidelity with genetic evolution of influenza A/Fujian/411/02(H3N2) viruses

scientific article published on March 2011

Dynamic evolution of hepatitis C virus resistance-associated substitutions in the absence of antiviral treatment.

scientific article published on 31 January 2017

Effect of reassortment on the nucleotide and amino acid changes of human A/H3N2 RNP subunits during 1998-2009.

scientific article published on 14 June 2011

Emergence of a new norovirus genotype II.4 variant associated with global outbreaks of gastroenteritis.

scientific article published in February 2006

Envelope-Specific IgG3 and IgG1 Responses Are Associated with Clearance of Acute Hepatitis C Virus Infection

scientific article published on 08 January 2020

Epidemics of gastroenteritis during 2006 were associated with the spread of norovirus GII.4 variants 2006a and 2006b

scientific article published in February 2008

Erratum to “A Bioinformatics Pipeline for the Analyses of Viral Escape Dynamics and Host Immune Responses during an Infection”.

scientific article published on 21 September 2014

Evidence that hepatitis C virus genome partly controls infection outcome.

scientific article

Frequent multiple hepatitis C virus infections among injection drug users in a prison setting

scientific article published in November 2010

Genome-wide mutagenesis of dengue virus reveals plasticity of the NS1 protein and enables generation of infectious tagged reporter viruses

scientific article published on 27 September 2017

HIV infection and hepatitis C virus genotype 1a are associated with phylogenetic clustering among people with recently acquired hepatitis C virus infection.

scientific article published on 26 November 2015

Hepatitis C virus nonstructural protein 5B is involved in virus morphogenesis

scientific article

Hepatitis C virus reinfection and superinfection among treated and untreated participants with recent infection

scientific article published on 29 February 2012

Hepatitis C-specific effector and regulatory CD4 T-cell responses are associated with the outcomes of primary infection.

scientific article published on 25 August 2016

Historical Trends in the Hepatitis C Virus Epidemics in North America and Australia

scientific article published on 28 August 2016

Impact of an Open Access Nationwide Treatment Model on Hepatitis C Virus Antiviral Drug Resistance

scientific article published on 06 April 2020

Impact of sequencing depth and read length on single cell RNA sequencing data of T cells.

scientific article published on 6 October 2017

Incident Hepatitis C Virus Genotype Distribution and Multiple Infection in Australian Prisons

scientific article published on 11 May 2016

Inhibitors of the Hepatitis C Virus Polymerase; Mode of Action and Resistance

scientific article

Limited naturally occurring escape in broadly neutralizing antibody epitopes in hepatitis C glycoprotein E2 and constrained sequence usage in acute infection

scientific article published on 5 January 2017

Linking the T cell receptor to the single cell transcriptome in antigen-specific human T cells

scientific article

Mechanisms of GII.4 norovirus evolution ⬇️

scientific article published on February 9, 2011

Norovirus GII.4 variant 2006b caused epidemics of acute gastroenteritis in Australia during 2007 and 2008.

scientific article published in December 2010

Norovirus excretion in an aged-care setting

scientific article published on 16 April 2008

Occult infection with hepatitis C virus: friend or foe?

scientific article

Persistent infections in immunocompromised hosts are rarely sources of new pathogen variants

scientific article published on 28 July 2017

Phylogenetic analysis of full-length, early infection, hepatitis C virus genomes among people with intravenous drug use: the InC3 Study.

scientific article

Rapid evolution of pandemic noroviruses of the GII.4 lineage

scientific article published in March 2010

Rare occurrence of occult hepatitis C virus in apparently uninfected injecting drug users: a two-centre, masked, case-control study

scientific article published on 17 April 2013

Resistance to hepatitis C virus: potential genetic and immunological determinants.

scientific article

Sequencing of hepatitis C virus for detection of resistance to direct-acting antiviral therapy: A systematic review.

scientific article published on 22 May 2017

The Influence of Hepatitis C Virus Genetic Region on Phylogenetic Clustering Analysis

scientific article published on 20 July 2015

The Interferon-induced Transmembrane Proteins, IFITM1, IFITM2, and IFITM3 Inhibit Hepatitis C Virus Entry

scientific article

Transmission of Hepatitis C Virus among Prisoners, Australia, 2005-2012.

scientific article published on May 2015

Transmitted/Founder Viruses Rapidly Escape from CD8+ T Cell Responses in Acute Hepatitis C Virus Infection

scientific article published on 4 March 2015

Understanding the Determinants of BnAb Induction in Acute HCV Infection

scientific article published on 21 November 2018

Understanding the complex evolution of rapidly mutating viruses with deep sequencing: Beyond the analysis of viral diversity

scientific article

Viral quasispecies assembly via maximal clique enumeration

scientific article (publication date: March 2014)

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