List of works - Tomoyuki Hori

A fine-scale phylogenetic analysis of free-living Burkholderia species in sugarcane field soil

scientific article

Aerobic microbial life persists in oxic marine sediment as old as 101.5 million years

scientific article published on 28 July 2020

An oleaginous bacterium that intrinsically accumulates long-chain free Fatty acids in its cytoplasm

scientific article published on 02 December 2013

Architecture, component, and microbiome of biofilm involved in the fouling of membrane bioreactors.

scientific article

Bacterial community dynamics during reduction of odorous compounds in aerated pig manure slurry.

scientific article

Bacterial population succession and adaptation affected by insecticide application and soil spraying history.

scientific article

Burkholderia of Plant-Beneficial Group are Symbiotically Associated with Bordered Plant Bugs (Heteroptera: Pyrrhocoroidea: Largidae).

scientific article

Counter-diffusion biofilms have lower N2O emissions than co-diffusion biofilms during simultaneous nitrification and denitrification: Insights from depth-profile analysis

scientific article published on 24 July 2017

DEEP BIOSPHERE. Exploring deep microbial life in coal-bearing sediment down to ~2.5 km below the ocean floor.

scientific article

Detection of active, potentially acetate-oxidizing syntrophs in an anaerobic digester by flux measurement and formyltetrahydrofolate synthetase (FTHFS) expression profiling ⬇️

scientific article published on April 7, 2011

Distinctive Responses of Metabolically Active Microbiota to Acidification in a Thermophilic Anaerobic Digester ⬇️

scientific article published on January 15, 2011

Draft Genome Sequence of Azospira sp. Strain I13, a Nitrous Oxide-Reducing Bacterium Harboring Clade II Type nosZ.

scientific article published on 17 May 2018

Draft Genome Sequence of Burkholderia stabilis LA20W, a Trehalose Producer That Uses Levulinic Acid as a Substrate

scientific article published on 04 August 2016

Draft Genome Sequence of Geobacter pelophilus Strain Dfr2, a Ferric Iron-Reducing Bacterium. ⬇️

scientific article

Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids

scientific article

Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester.

scientific article

Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments.

scientific article published on 18 May 2015

Ecophysiology of Zetaproteobacteria Associated with Shallow Hydrothermal Iron-Oxyhydroxide Deposits in Nagahama Bay of Satsuma Iwo-Jima, Japan

scientific article

Effect of a microbiota activator on accumulated ammonium and microbial community structure in a pilot-scale membrane bioreactor.

scientific article published on January 2015

Effects of Organic-Loading-Rate Reduction on Sludge Biomass and Microbial Community in a Deteriorated Pilot-Scale Membrane Bioreactor

scientific article

Effects of aeration and internal recycle flow on nitrous oxide emissions from a modified Ludzak-Ettinger process fed with glycerol

scientific article

Electrodialytic separation of levulinic acid catalytically synthesized from woody biomass for use in microbial conversion

scientific article

Environmental factors shaping the community structure of ammonia-oxidizing bacteria and archaea in sugarcane field soil

scientific article

Eukaryotic Microbiomes of Membrane-Attached Biofilms in Membrane Bioreactors Analyzed by High-Throughput Sequencing and Microscopic Observations

scientific article published on 12 December 2017

Evidence of environmental and vertical transmission of Burkholderia symbionts in the oriental chinch bug, Cavelerius saccharivorus (Heteroptera: Blissidae).

scientific article

Fine-scale monitoring of shifts in microbial community composition after high organic loading in a pilot-scale membrane bioreactor.

scientific article published on 2 November 2015

Free nitrous acid and pH determine the predominant ammonia-oxidizing bacteria and amount of N2O in a partial nitrifying reactor.

scientific article published on 11 November 2016

Functional maintenance and structural flexibility of microbial communities perturbed by simulated intense rainfall in a pilot-scale membrane bioreactor.

scientific article

High-Resolution Dynamics of Microbial Communities during Dissimilatory Selenate Reduction in Anoxic Soil

scientific article published on 11 June 2015

High-rate nitrogen removal from waste brine by marine anammox bacteria in a pilot-scale UASB reactor.

scientific article published on 4 December 2017

High-resolution phylogenetic analysis of residual bacterial species of fouled membranes after NaOCl cleaning

scientific article published on 22 February 2016

Hydraulic retention time and pH affect the performance and microbial communities of passive bioreactors for treatment of acid mine drainage

scientific article

Identification of acetate-assimilating microorganisms under methanogenic conditions in anoxic rice field soil by comparative stable isotope probing of RNA.

scientific article published on 27 October 2006

Identification of iron-reducing microorganisms in anoxic rice paddy soil by 13C-acetate probing

scientific article published on 24 September 2009

Infection dynamics of insecticide-degrading symbionts from soil to insects in response to insecticide spraying.

scientific article published on 17 January 2018

Influence of feedstock-to-inoculum ratio on performance and microbial community succession during solid-state thermophilic anaerobic co-digestion of pig urine and rice straw.

scientific article published on 30 December 2017

Insect's intestinal organ for symbiont sorting

scientific article

Insecticide resistance by a host-symbiont reciprocal detoxification

scientific article published on 05 November 2021

Insecticide-degrading Burkholderia symbionts of the stinkbug naturally occupy various environments of sugarcane fields in a Southeast island of Japan.

scientific article

Involvement of a novel fermentative bacterium in acidification in a thermophilic anaerobic digester

scientific article

Isolation of butanol- and isobutanol-tolerant bacteria and physiological characterization of their butanol tolerance

scientific article

Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments

scientific article published on 5 May 2015

Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste.

scientific article

Predominance of Viable Spore-Forming Piezophilic Bacteria in High-Pressure Enrichment Cultures from ~1.5 to 2.4 km-Deep Coal-Bearing Sediments below the Ocean Floor

scientific article

Reorganization of the bacterial and archaeal populations associated with organic loading conditions in a thermophilic anaerobic digester

scientific article published on 5 October 2014

Sulfur-Oxidizing Bacteria Mediate Microbial Community Succession and Element Cycling in Launched Marine Sediment

scientific article published on 03 February 2017

Survival of free-living Acholeplasma in aerated pig manure slurry revealed by (13)C-labeled bacterial biomass probing.

scientific article

The combination of functional metagenomics and an oil-fed enrichment strategy revealed the phylogenetic diversity of lipolytic bacteria overlooked by the cultivation-based method.

scientific article

The impact of aridification and vegetation type on changes in the community structure of methane-cycling microorganisms in Japanese wetland soils.

scientific article

Ultra-high-sensitivity stable-isotope probing of rRNA by high-throughput sequencing of isopycnic centrifugation gradients.

scientific article

List of works by Tomoyuki Hori

A fine-scale phylogenetic analysis of free-living Burkholderia species in sugarcane field soil

Aerobic microbial life persists in oxic marine sediment as old as 101.5 million years

An oleaginous bacterium that intrinsically accumulates long-chain free Fatty acids in its cytoplasm

Architecture, component, and microbiome of biofilm involved in the fouling of membrane bioreactors.

Bacterial community dynamics during reduction of odorous compounds in aerated pig manure slurry.

Bacterial population succession and adaptation affected by insecticide application and soil spraying history.

Burkholderia of Plant-Beneficial Group are Symbiotically Associated with Bordered Plant Bugs (Heteroptera: Pyrrhocoroidea: Largidae).

Counter-diffusion biofilms have lower N2O emissions than co-diffusion biofilms during simultaneous nitrification and denitrification: Insights from depth-profile analysis

DEEP BIOSPHERE. Exploring deep microbial life in coal-bearing sediment down to ~2.5 km below the ocean floor.

Detection of active, potentially acetate-oxidizing syntrophs in an anaerobic digester by flux measurement and formyltetrahydrofolate synthetase (FTHFS) expression profiling ⬇️

Distinctive Responses of Metabolically Active Microbiota to Acidification in a Thermophilic Anaerobic Digester ⬇️

Draft Genome Sequence of Azospira sp. Strain I13, a Nitrous Oxide-Reducing Bacterium Harboring Clade II Type nosZ.

Draft Genome Sequence of Burkholderia stabilis LA20W, a Trehalose Producer That Uses Levulinic Acid as a Substrate

Draft Genome Sequence of Geobacter pelophilus Strain Dfr2, a Ferric Iron-Reducing Bacterium. ⬇️

Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids

Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester.

Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments.

Ecophysiology of Zetaproteobacteria Associated with Shallow Hydrothermal Iron-Oxyhydroxide Deposits in Nagahama Bay of Satsuma Iwo-Jima, Japan

Effect of a microbiota activator on accumulated ammonium and microbial community structure in a pilot-scale membrane bioreactor.

Effects of Organic-Loading-Rate Reduction on Sludge Biomass and Microbial Community in a Deteriorated Pilot-Scale Membrane Bioreactor

Effects of aeration and internal recycle flow on nitrous oxide emissions from a modified Ludzak-Ettinger process fed with glycerol

Electrodialytic separation of levulinic acid catalytically synthesized from woody biomass for use in microbial conversion

Environmental factors shaping the community structure of ammonia-oxidizing bacteria and archaea in sugarcane field soil

Eukaryotic Microbiomes of Membrane-Attached Biofilms in Membrane Bioreactors Analyzed by High-Throughput Sequencing and Microscopic Observations

Evidence of environmental and vertical transmission of Burkholderia symbionts in the oriental chinch bug, Cavelerius saccharivorus (Heteroptera: Blissidae).

Fine-scale monitoring of shifts in microbial community composition after high organic loading in a pilot-scale membrane bioreactor.

Free nitrous acid and pH determine the predominant ammonia-oxidizing bacteria and amount of N2O in a partial nitrifying reactor.

Functional maintenance and structural flexibility of microbial communities perturbed by simulated intense rainfall in a pilot-scale membrane bioreactor.

High-Resolution Dynamics of Microbial Communities during Dissimilatory Selenate Reduction in Anoxic Soil

High-rate nitrogen removal from waste brine by marine anammox bacteria in a pilot-scale UASB reactor.

High-resolution phylogenetic analysis of residual bacterial species of fouled membranes after NaOCl cleaning

Hydraulic retention time and pH affect the performance and microbial communities of passive bioreactors for treatment of acid mine drainage

Identification of acetate-assimilating microorganisms under methanogenic conditions in anoxic rice field soil by comparative stable isotope probing of RNA.

Identification of iron-reducing microorganisms in anoxic rice paddy soil by 13C-acetate probing

Infection dynamics of insecticide-degrading symbionts from soil to insects in response to insecticide spraying.

Influence of feedstock-to-inoculum ratio on performance and microbial community succession during solid-state thermophilic anaerobic co-digestion of pig urine and rice straw.

Insect's intestinal organ for symbiont sorting

Insecticide resistance by a host-symbiont reciprocal detoxification

Insecticide-degrading Burkholderia symbionts of the stinkbug naturally occupy various environments of sugarcane fields in a Southeast island of Japan.

Involvement of a novel fermentative bacterium in acidification in a thermophilic anaerobic digester

Isolation of butanol- and isobutanol-tolerant bacteria and physiological characterization of their butanol tolerance

Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments

Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste.

Predominance of Viable Spore-Forming Piezophilic Bacteria in High-Pressure Enrichment Cultures from ~1.5 to 2.4 km-Deep Coal-Bearing Sediments below the Ocean Floor

Reorganization of the bacterial and archaeal populations associated with organic loading conditions in a thermophilic anaerobic digester

Sulfur-Oxidizing Bacteria Mediate Microbial Community Succession and Element Cycling in Launched Marine Sediment

Survival of free-living Acholeplasma in aerated pig manure slurry revealed by (13)C-labeled bacterial biomass probing.

The combination of functional metagenomics and an oil-fed enrichment strategy revealed the phylogenetic diversity of lipolytic bacteria overlooked by the cultivation-based method.

The impact of aridification and vegetation type on changes in the community structure of methane-cycling microorganisms in Japanese wetland soils.

Ultra-high-sensitivity stable-isotope probing of rRNA by high-throughput sequencing of isopycnic centrifugation gradients.