List of works - Ivan G. Shabalin

A close look onto structural models and primary ligands of metallo-β-lactamases

A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1

scholarly article by Arman Mussakhmetov published in September 2018

ATP-dependent DNA ligase fromThermococcussp. 1519 displays a new arrangement of the OB-fold domain

scientific article

Albumin-based transport of non-steroidal anti-inflammatory drugs in mammalian blood plasma

scientific article published on 29 May 2020

Atomic Resolution Crystal Structure of NAD(+)-Dependent Formate Dehydrogenase from Bacterium Moraxella sp. C-1.

scientific article published on October 2009

Automatic Recognition of Ligands in Electron Density by Machine Learning

scientific article published on 01 February 2019

Characterizing metal-binding sites in proteins with X-ray crystallography.

scientific article

CheckMyMetal: a macromolecular metal-binding validation tool

scientific article

Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins

scientific article

Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

article published in 2018

Comparison of metal-bound and unbound structures of aminopeptidase B proteins from Escherichia coli and Yersinia pestis

scientific article published on 19 April 2020

Correction to: Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

scientific article published on 16 July 2019

Corrigendum to "A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1" [Biochem. Biophys. Res. Commun. 504 (1) (2018 Sep 26) 328-333]

scientific article published on 05 October 2018

Covid-19.bioreproducibility.org: A web resource for SARS-CoV-2-related structural models

scientific article published on 27 September 2020

Crystal structure of equine serum albumin in complex with cetirizine reveals a novel drug binding site

scientific article

Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin

scientific article

Formate dehyrogenase from Soya Glycine max: cloning, expression, properties and structure of the recombinant enzyme

Glyoxylate reductase as versatile enzymatic system for pharmaceutical and medical use

Investigation of formate transport through the substrate channel of formate dehydrogenase by steered molecular dynamics simulations

article

Ligand-centered assessment of SARS-CoV-2 drug target models in the Protein Data Bank

scientific article published on 17 May 2020

Magnesium-binding architectures in RNA crystal structures: validation, binding preferences, classification and motif detection

scientific article

Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy

scientific article published on 23 July 2020

Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy

scientific article published on 29 September 2020

Molecular modeling of formate dehydrogenase: the formation of the Michaelis complex

scientific article published on 01 January 2012

NADP-Dependent Aldehyde Dehydrogenase from Archaeon Pyrobaculum sp.1860: Structural and Functional Features.

scientific article

Protein purification and crystallization artifacts: The tale usually not told

scientific article

Pyrimidine biosynthesis in pathogens - Structures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae

scientific article published on 15 June 2019

Rapid response to emerging biomedical challenges and threats

Recombinant formate dehydrogenase from Arabidopsis thaliana: Preparation, crystal growth in microgravity, and preliminary X-ray diffraction study

article published in 2010

Refining the macromolecular model – achieving the best agreement with the data from X-ray diffraction experiment

scientific article published on 21 September 2018

State-of-the-Art Data Management: Improving the Reproducibility, Consistency, and Traceability of Structural Biology and in Vitro Biochemical Experiments

scientific article published on 01 January 2021

Structural and biochemical analysis of Bacillus anthracis prephenate dehydrogenase reveals an unusual mode of inhibition by tyrosine via the ACT domain

scientific article published on 21 November 2019

Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies

scientific article

Structure of BbKI, a disulfide-free plasma kallikrein inhibitor

scientific article

Structure of anabolic ornithine carbamoyltransferase from Campylobacter jejuni at 2.7 Å resolution

scientific article

Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft

scientific article

Testosterone meets albumin - the molecular mechanism of sex hormone transport by serum albumins

scientific article published on 17 December 2018

The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years

scientific article published on 22 November 2019

Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase

scientific article published on 24 February 2020

X-ray crystallography over the past decade for novel drug discovery - where are we heading next?

scientific article

List of works by Ivan G. Shabalin

A close look onto structural models and primary ligands of metallo-β-lactamases

A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1

ATP-dependent DNA ligase fromThermococcussp. 1519 displays a new arrangement of the OB-fold domain

Albumin-based transport of non-steroidal anti-inflammatory drugs in mammalian blood plasma

Atomic Resolution Crystal Structure of NAD(+)-Dependent Formate Dehydrogenase from Bacterium Moraxella sp. C-1.

Automatic Recognition of Ligands in Electron Density by Machine Learning

Characterizing metal-binding sites in proteins with X-ray crystallography.

CheckMyMetal: a macromolecular metal-binding validation tool

Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins

Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

Comparison of metal-bound and unbound structures of aminopeptidase B proteins from Escherichia coli and Yersinia pestis

Correction to: Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

Corrigendum to "A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1" [Biochem. Biophys. Res. Commun. 504 (1) (2018 Sep 26) 328-333]

Covid-19.bioreproducibility.org: A web resource for SARS-CoV-2-related structural models

Crystal structure of equine serum albumin in complex with cetirizine reveals a novel drug binding site

Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin

Formate dehyrogenase from Soya Glycine max: cloning, expression, properties and structure of the recombinant enzyme

Glyoxylate reductase as versatile enzymatic system for pharmaceutical and medical use

Investigation of formate transport through the substrate channel of formate dehydrogenase by steered molecular dynamics simulations

Ligand-centered assessment of SARS-CoV-2 drug target models in the Protein Data Bank

Magnesium-binding architectures in RNA crystal structures: validation, binding preferences, classification and motif detection

Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy

Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy

Molecular modeling of formate dehydrogenase: the formation of the Michaelis complex

NADP-Dependent Aldehyde Dehydrogenase from Archaeon Pyrobaculum sp.1860: Structural and Functional Features.

Protein purification and crystallization artifacts: The tale usually not told

Pyrimidine biosynthesis in pathogens - Structures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae

Rapid response to emerging biomedical challenges and threats

Recombinant formate dehydrogenase from Arabidopsis thaliana: Preparation, crystal growth in microgravity, and preliminary X-ray diffraction study

Refining the macromolecular model – achieving the best agreement with the data from X-ray diffraction experiment

State-of-the-Art Data Management: Improving the Reproducibility, Consistency, and Traceability of Structural Biology and in Vitro Biochemical Experiments

Structural and biochemical analysis of Bacillus anthracis prephenate dehydrogenase reveals an unusual mode of inhibition by tyrosine via the ACT domain

Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies

Structure of BbKI, a disulfide-free plasma kallikrein inhibitor

Structure of anabolic ornithine carbamoyltransferase from Campylobacter jejuni at 2.7 Å resolution

Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft

Testosterone meets albumin - the molecular mechanism of sex hormone transport by serum albumins

The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years

Trinuclear copper biocatalytic center forms an active site of thiocyanate dehydrogenase

X-ray crystallography over the past decade for novel drug discovery - where are we heading next?