List of works - Li Chen

5-Hydroxymethylcytosine-mediated alteration of transposon activity associated with the exposure to adverse in utero environments in human

scientific article published on 22 March 2016

A novel statistical method for quantitative comparison of multiple ChIP-seq datasets

scientific article

Active N 6 -Methyladenine Demethylation by DMAD Regulates Gene Expression by Coordinating with Polycomb Protein in Neurons

article

Altering 5-hydroxymethylcytosine modification impacts ischemic brain injury

scientific article

Application of topic models to a compendium of ChIP-Seq datasets uncovers recurrent transcriptional regulatory modules

scientific article published on 03 January 2020

Combined Loss of Tet1 and Tet2 Promotes B Cell, but Not Myeloid Malignancies, in Mice

scientific article published on 11 November 2015

DIVAN: accurate identification of non-coding disease-specific risk variants using multi-omics profiles

scientific article published on 06 December 2016

DNA N6-methyladenine is dynamically regulated in the mouse brain following environmental stress

scientific article published on 24 October 2017

Destin: toolkit for single-cell analysis of chromatin accessibility

scientific article published on 01 October 2019

Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates.

scientific article published on 15 July 2015

Genome-wide alterations in hippocampal 5-hydroxymethylcytosine links plasticity genes to acute stress

scientific article

Impact of a multi-component immunization intervention on pneumococcal and herpes zoster vaccinations: A randomized controlled trial of community pharmacies in 2 states

scientific article published on 07 February 2019

In vitro and ex vivo gene expression profiling reveals differential kinetic response of HSPs and UPR genes is associated with PI resistance in multiple myeloma

scientific article published on 28 July 2020

Molecular signatures associated with ZIKV exposure in human cortical neural progenitors

scientific article

Omicseq: a web-based search engine for exploring omics datasets.

scientific article published on 10 April 2017

Sex-specific hippocampal 5-hydroxymethylcytosine is disrupted in response to acute stress

scientific article

Small Molecules Efficiently Reprogram Human Astroglial Cells into Functional Neurons

scientific article

TIVAN: Tissue-specific cis-eQTL single nucleotide variant annotation and prediction

article

Ten-eleven translocation 2 interacts with forkhead box O3 and regulates adult neurogenesis

scientific article

Tet2 loss leads to hypermutagenicity in haematopoietic stem/progenitor cells

scientific article

Using DIVAN to assess disease/trait-associated single nucleotide variants in genome-wide scale

scientific article

circMeta: a unified computational framework for genomic feature annotation and differential expression analysis of circular RNAs

scientific article published on 01 January 2020

hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data

scientific article

traseR: an R package for performing trait-associated SNP enrichment analysis in genomic intervals.

scientific article published on 18 December 2015

List of works by Li Chen

5-Hydroxymethylcytosine-mediated alteration of transposon activity associated with the exposure to adverse in utero environments in human

A novel statistical method for quantitative comparison of multiple ChIP-seq datasets

Active N 6 -Methyladenine Demethylation by DMAD Regulates Gene Expression by Coordinating with Polycomb Protein in Neurons

Altering 5-hydroxymethylcytosine modification impacts ischemic brain injury

Application of topic models to a compendium of ChIP-Seq datasets uncovers recurrent transcriptional regulatory modules

Combined Loss of Tet1 and Tet2 Promotes B Cell, but Not Myeloid Malignancies, in Mice

DIVAN: accurate identification of non-coding disease-specific risk variants using multi-omics profiles

DNA N6-methyladenine is dynamically regulated in the mouse brain following environmental stress

Destin: toolkit for single-cell analysis of chromatin accessibility

Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates.

Genome-wide alterations in hippocampal 5-hydroxymethylcytosine links plasticity genes to acute stress

Impact of a multi-component immunization intervention on pneumococcal and herpes zoster vaccinations: A randomized controlled trial of community pharmacies in 2 states

In vitro and ex vivo gene expression profiling reveals differential kinetic response of HSPs and UPR genes is associated with PI resistance in multiple myeloma

Molecular signatures associated with ZIKV exposure in human cortical neural progenitors

Omicseq: a web-based search engine for exploring omics datasets.

Sex-specific hippocampal 5-hydroxymethylcytosine is disrupted in response to acute stress

Small Molecules Efficiently Reprogram Human Astroglial Cells into Functional Neurons

TIVAN: Tissue-specific cis-eQTL single nucleotide variant annotation and prediction

Ten-eleven translocation 2 interacts with forkhead box O3 and regulates adult neurogenesis

Tet2 loss leads to hypermutagenicity in haematopoietic stem/progenitor cells

Using DIVAN to assess disease/trait-associated single nucleotide variants in genome-wide scale

circMeta: a unified computational framework for genomic feature annotation and differential expression analysis of circular RNAs

hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data

traseR: an R package for performing trait-associated SNP enrichment analysis in genomic intervals.