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List of works by Susumu Uchiyama

2DE for proteome analysis of human metaphase chromosomes

scientific article published in January 2009

A Comprehensive Study of Interaction between Peptidoglycan Fragments and Extracelluar Domain of Mycobacterium tuberculosis Ser/Thr Kinase PknB.

scientific article published on 29 August 2017

A comparative proteome analysis of human metaphase chromosomes isolated from two different cell lines reveals a set of conserved chromosome-associated proteins

scientific article published on March 2007

A multilaboratory comparison of calibration accuracy and the performance of external references in analytical ultracentrifugation

scientific article published on 21 May 2015

A non-canonical UBA-UBL interaction forms the linear-ubiquitin-chain assembly complex

scientific article

A nucleolar protein RRS1 contributes to chromosome congression

scientific article

ASURA (PHB2) Is Required for Kinetochore Assembly and Subsequent Chromosome Congression

scientific article published on 22 October 2011

ASURA (PHB2) interacts with Scc1 through chromatin

scientific article

ATP hydrolysis by KaiC promotes its KaiA binding in the cyanobacterial circadian clock system

scientific article published on 03 June 2019

Aggregation analysis of pharmaceutical human immunoglobulin preparations using size-exclusion chromatography and analytical ultracentrifugation sedimentation velocity

scientific article published on 24 August 2012

Allosteric regulation accompanied by oligomeric state changes of Trypanosoma brucei GMP reductase through cystathionine-β-synthase domain

scientific article published on 15 April 2020

An Archaeal Homolog of Proteasome Assembly Factor Functions as a Proteasome Activator

scientific article

An Assessment of the Ability of Submicron- and Micron-Size Silicone Oil Droplets in Dropped Prefillable Syringes to Invoke Early- and Late-Stage Immune Responses

scientific article published on 18 February 2019

Analytical ultracentrifugation with fluorescence detection system reveals differences in complex formation between recombinant human TNF and different biological TNF antagonists in various environments

scientific article

Anti-peptide antibodies for examining the conformation, molecular assembly and localization of an intracellular protein, ribosomal protein S6, in vivo

scientific article published on 26 November 2007

Apo- and holo-structures of 3alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831. Loop-helix transition induced by coenzyme binding

scientific article published on 12 August 2006

Archaeal ribosomal stalk protein interacts with translation factors in a nucleotide-independent manner via its conserved C terminus

scientific article published on 21 February 2012

Assembly modulation by adjusting countercharges of heterobimetallic supramolecular polymers composed of tris(spiroborate) twin bowls

scientific article published on 01 November 2010

Assembly of protein complexes restricts diffusion of Wnt3a proteins

scientific article published on 10 October 2018

Assembly states of the nucleosome assembly protein 1 (NAP-1) revealed by sedimentation velocity and non-denaturing MS.

scientific article

Aurora kinase is required for chromosome segregation in tobacco BY-2 cells

scientific article published on November 2006

Backbone NMR assignment and secondary structure of ribosome recycling factor (RRF) from Pseudomonas aeruginosa

scientific article published on 01 December 1999

Backbone NMR assignments of ribosome recycling factors (RRFs) from Escherichia coli and Tthermotoga maritima.

scientific article

Behavior of monoclonal antibodies: relation between the second virial coefficient (B (2)) at low concentrations and aggregation propensity and viscosity at high concentrations

scientific article published on 19 August 2011

Bifacial Nucleobases for Hexaplex Formation in Aqueous Solution

scientific article published on 21 June 2018

Bioactive beads-mediated transformation of rice with large DNA fragments containing Aegilops tauschii genes

scientific article published on 12 February 2009

Calcite-specific coupling protein in barnacle underwater cement.

scientific article

Calcium depletion destabilises kinetochore fibres by the removal of CENP-F from the kinetochore

scientific article published on 4 August 2017

Calcium ions function as a booster of chromosome condensation

scientific article published on 02 December 2016

Calreticulin as a new histone binding protein in mitotic chromosomes.

scientific article published in January 2006

Cell culture in a closed nano-space

scientific article published in January 2004

Changes in chromosomal surface structure by different isolation conditions

scientific article published on 01 December 2002

Characteristic domain motion in the ribosome recycling factor revealed by 15N NMR relaxation experiments and molecular dynamics simulations

scientific article

Characterization and dynamic analysis of Arabidopsis condensin subunits, AtCAP-H and AtCAP-H2.

scientific article published on 10 May 2005

Characterization of HIV-1 resistance to a fusion inhibitor, N36, derived from the gp41 amino-terminal heptad repeat

scientific article

Characterization of a splicing variant of plant Aurora kinase

scientific article published on 3 January 2007

Characterization of collagen model peptides containing 4-fluoroproline; (4(S)-fluoroproline-pro-gly)10 forms a triple helix, but (4(R)-fluoroproline-pro-gly)10 does not.

scientific article published in August 2003

Characterization of plant Aurora kinases during mitosis

scientific article published on May 2005

Characterization of the novel Trypanosoma brucei inosine 5'-monophosphate dehydrogenase

scientific article published in February 2013

Chromosome Scaffold is a Double-Stranded Assembly of Scaffold Proteins

scientific article published on July 2015

Chromosome interior observation by focused ion beam/scanning electron microscopy (FIB/SEM) using ionic liquid technique

scientific article published on 10 July 2014

Chromosome observation by scanning electron microscopy using ionic liquid

scientific article published on 28 March 2012

Chromosome protein framework from proteome analysis of isolated human metaphase chromosomes

scientific article published in January 2007

Cloning, expression, crystallization and preliminary X-ray characterization of cytochrome c552 from a moderate thermophilic bacterium, Hydrogenophilus thermoluteolus

scientific article published on 24 March 2005

Cloning, expression, crystallization and preliminary X-ray crystallographic analysis of a human condensin SMC2 hinge domain with short coiled coils

scientific article published on 26 August 2010

Collaborative Study for Analysis of Subvisible Particles Using Flow Imaging and Light Obscuration: Experiences in Japanese Biopharmaceutical Consortium

scientific article published on 16 August 2018

Collagen-like triple helix formation of synthetic (Pro-Pro-Gly)10 analogues: (4(S)-hydroxyprolyl-4(R)-hydroxyprolyl-Gly)10, (4(R)-hydroxyprolyl-4(R)-hydroxyprolyl-Gly)10 and (4(S)-fluoroprolyl-4(R)-fluoroprolyl-Gly)10.

scientific article published in October 2005

Comparative analysis of highly homologous Shewanella cytochromes c5 for stability and function

scientific article published on 07 May 2010

Complete thermal-unfolding profiles of oxidized and reduced cytochromes C.

scientific article published in November 2004

Condensin in Chromatid Cohesion and Segregation

scientific article published on 22 March 2016

Conformation analysis of eel calcitonin--comparison with the conformation of elcatonin

scientific article

Creation of a binuclear purple copper site within a de novo coiled-coil protein

scientific article published on 28 September 2012

Creation of a type 1 blue copper site within a de novo coiled-coil protein scaffold

scientific article published on 2 December 2010

Crystal structure of Pyrococcus horikoshii PPC protein at 1.60 A resolution

scientific article

Crystal structure of extracellular domain of human lectin-like transcript 1 (LLT1), the ligand for natural killer receptor-P1A

scientific article

Crystal structure of the dog allergen Can f 6 and structure-based implications of its cross-reactivity with the cat allergen Fel d 4

scientific article published in Scientific Reports

Crystallization and preliminary X-ray analysis of the complex of NADH and 3alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831.

scientific article published on 31 May 2006

Crystallization and preliminary X-ray crystallographic analysis of a conserved domain in plants and prokaryotes from Pyrococcus horikoshii OT3.

scientific article published on April 2005

Crystallization and preliminary X-ray crystallographic studies of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly.

scientific article published on 21 December 2001

Cytochrome c from a thermophilic bacterium has provided insights into the mechanisms of protein maturation, folding, and stability

scientific article

Depletion of nucleophosmin leads to distortion of nucleolar and nuclear structures in HeLa cells

scientific article published on November 2008

Detection of histidine oxidation in a monoclonal immunoglobulin gamma (IgG) 1 antibody

scientific article published on 11 July 2014

Development of a multistage classifier for a monitoring system of cell activity based on imaging of chromosomal dynamics

scientific article published on May 2007

Development of new dosimetry using extended DNA fibers

scientific article published in January 2004

Development of novel humanized anti-CD20 antibodies based on affinity constant and epitope

scientific article

Development of syringes and vials for delivery of biologics: current challenges and innovative solutions

scientific article published on 20 November 2020

Different effects of 4-hydroxyproline and 4-fluoroproline on the stability of collagen triple helix

scientific article

Disassembly of the self-assembled, double-ring structure of proteasome α7 homo-tetradecamer by α6.

scientific article

Domain 5 of high molecular weight kininogen inhibits collagen-mediated cancer cell adhesion and invasion in association with α-actinin-4.

scientific article

Drug delivery system for poorly water-soluble compounds using lipocalin-type prostaglandin D synthase

scientific article

Dynamic structural states of ClpB involved in its disaggregation function.

scientific article published in June 2018

Effect of UVC Irradiation on the Oxidation of Histidine in Monoclonal Antibodies

scientific article published on 14 April 2020

Effect of hydration on the stability of the collagen-like triple-helical structure of [4(R)-hydroxyprolyl-4(R)-hydroxyprolylglycine]10

scientific article published on 01 December 2005

Effects of antibody affinity and antigen valence on molecular forms of immune complexes

scientific article published on 2 October 2009

Effects of ionic strength and sugars on the aggregation propensity of monoclonal antibodies: influence of colloidal and conformational stabilities

scientific article published on 15 January 2013

Effects of rotational speed on the hydrodynamic properties of pharmaceutical antibodies measured by analytical ultracentrifugation sedimentation velocity

scientific article published on 21 June 2012

Effects of syringe material and silicone oil lubrication on the stability of pharmaceutical proteins

scientific article published on 24 September 2014

Efficient generation of single domain antibodies with high affinities and enhanced thermal stabilities

scientific article

Fc domain mediated self-association of an IgG1 monoclonal antibody under a low ionic strength condition

scientific article published on 23 July 2011

Fibrillarin, a nucleolar protein, is required for normal nuclear morphology and cellular growth in HeLa cells

scientific article published on 25 June 2007

Flow karyotypes and chromosomal DNA contents of genus Triticum species and rye (Secale cereale).

scientific article

Fluorescent labeling of plant chromosomes in suspension by FISH.

scientific article

Friability Testing as a New Stress-Stability Assay for Biopharmaceuticals

scientific article published on 8 June 2017

Generation of monoclonal antibodies against chromosomal antigens that have a high sequence similarity between human and mouse

scientific article published on 19 September 2005

H1.X with different properties from other linker histones is required for mitotic progression

scientific article (publication date: 7 August 2007)

H2A.Z and H3.3 histone variants affect nucleosome structure: biochemical and biophysical studies

scientific article published on 01 November 2009

Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance

scientific article published on 18 March 2016

Histone H2A mobility is regulated by its tails and acetylation of core histone tails

scientific article published on 10 April 2007

Hydrophobic core around tyrosine for human endothelin-1 investigated by photochemically induced dynamic nuclear polarization nuclear magnetic resonance and matrix-assisted laser desorption ionization time-of-flight mass spectrometry

scientific article

Hyperstability and crystal structure of cytochrome c(555) from hyperthermophilic Aquifex aeolicus

scientific article

Identification of IgG1 Aggregation Initiation Region by Hydrogen Deuterium Mass Spectrometry

scientific article published on 06 March 2019

Identification of a novel plant MAR DNA binding protein localized on chromosomal surfaces

scientific article published in September 2004

Influence of amino acid side chain packing on Fe-methionine coordination in thermostable cytochrome C.

scientific article published in October 2002

Interaction mode between catalytic and regulatory subunits in glucosidase II involved in ER glycoprotein quality control

scientific article

Interaction of ribosome recycling factor and elongation factor EF-G with E. coli ribosomes studied by the surface plasmon resonance technique

scientific article published on 01 December 2000

Interdependency and phosphorylation of KIF4 and condensin I are essential for organization of chromosome scaffold

scientific article published on 17 August 2017

Interlaboratory comparison about feasibility of insoluble particulate matter test for injections with reduced test volume in light obscuration method

scientific article published on 13 December 2018

Ionic liquids and protein folding-old tricks for new solvents

scientific article published on 19 March 2019

Liquid formulation for antibody drugs

scientific article

Live cell imaging reveals plant aurora kinase has dual roles during mitosis

scientific article

Mechanism of dimerization and structural features of human LI-cadherin

scientific article published on 06 August 2021

Mutational and Combinatorial Control of Self-Assembling and Disassembling of Human Proteasome α Subunits. ⬇️

scientific article published on 9 May 2019

NMR Detection of Semi-Specific Antibody Interactions in Serum Environments.

scientific article

Native mass spectrometry for understanding dynamic protein complex.

scientific article

New insight into the dynamical system of αB-crystallin oligomers

scientific article published on 06 July 2016

Novel helical assembly in arginine methyltransferase 8

scientific article

Nucleolin functions in nucleolus formation and chromosome congression

scientific article published on 29 May 2007

Nucleophosmin is required for chromosome congression, proper mitotic spindle formation, and kinetochore-microtubule attachment in HeLa cells

scientific article published on 23 October 2008

PHB2 protects sister-chromatid cohesion in mitosis

scientific article

Pepsin immobilization on an aldehyde-modified polymethacrylate monolith and its application for protein analysis

scientific article published on 20 November 2014

Phase separation of an IgG1 antibody solution under a low ionic strength condition

scientific article published on 17 April 2010

Physicochemical improvement of rabbit derived single-domain antibodies by substitutions with amino acids conserved in camelid antibodies

scientific article published in February 2018

Polymorphism of collagen triple helix revealed by 19F NMR of model peptide [Pro-4(R)-hydroxyprolyl-Gly]3-[Pro-4(R)-fluoroprolyl-Gly]-[Pro-4(R)-hydroxyprolyl-Gly]3

scientific article published on 20 March 2012

Protein composition of human metaphase chromosomes analyzed by two-dimensional electrophoreses.

scientific article published in January 2004

Protein encapsulation within synthetic molecular hosts

scientific article published in Nature Communications

Proteome analysis of human metaphase chromosomes.

scientific article published on 31 January 2005

Publisher Correction: Dynamic structural states of ClpB involved in its disaggregation function

scientific article published on 12 July 2019

Quantitative Laser Diffraction for Quantification of Protein Aggregates: Comparison With Resonant Mass Measurement, Nanoparticle Tracking Analysis, Flow Imaging, and Light Obscuration

scientific article published on 17 September 2018

Quantitative laser diffraction method for the assessment of protein subvisible particles

scientific article published on December 2014

RBMX: a regulator for maintenance and centromeric protection of sister chromatid cohesion

scientific article published on 22 March 2012

RecA requires two molecules of Mg2+ ions for its optimal strand exchange activity in vitro

scientific article published on 30 January 2018

Recent Topics of Research in the Characterization and Quality Control of Biopharmaceuticals in Japan

scientific article

Regional and segmental flexibility of antibodies in interaction with antigens of different size.

scientific article

Relationship between redox function and protein stability of cytochromes c

scientific article published on 01 November 2003

Roles of a short connecting disulfide bond in the stability and function of psychrophilic Shewanella violacea cytochrome c (5).

scientific article published on 27 July 2007

SDS-induced oligomerization of Lys49-phospholipase A2 from snake venom

scientific article published on 20 February 2019

Sedimentation velocity analytical ultracentrifugation for characterization of therapeutic antibodies

scientific article

Selected mutations in a mesophilic cytochrome c confer the stability of a thermophilic counterpart

scientific article

Small-molecule inhibition of PTPRZ reduces tumor growth in a rat model of glioblastoma

scientific article published on 9 February 2016

Solution structure of the ribosome recycling factor from Aquifex aeolicus

scientific article

Specific racemization of heavy-chain cysteine-220 in the hinge region of immunoglobulin gamma 1 as a possible cause of degradation during storage

scientific article published on 19 April 2011

Stability enhancement of cytochrome c through heme deprotonation and mutations

scientific article published on 10 October 2008

Stabilization mechanism of cytochrome c552 from a moderately thermophilic bacterium, Hydrogenophilus thermoluteolus

scientific article published on 7 August 2008

Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA.

scientific article published on 11 October 2016

Structural Basis for Dimer Formation of Human Condensin Structural Maintenance of Chromosome Proteins and Its Implications for Single-stranded DNA Recognition

scientific article

Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca2+-Driven Catalytic Cycle

scientific article published on 27 August 2018

Structural and binding properties of laminarin revealed by analytical ultracentrifugation and calorimetric analyses

scientific article published on 26 May 2016

Structural and thermodynamic behavior of eukaryotic initiation factor 4E in supramolecular formation with 4E-binding protein 1 and mRNA cap analogue, studied by spectroscopic methods

scientific article (publication date: October 2001)

Structural basis for PPARγ transactivation by endocrine-disrupting organotin compounds

scientific article

Structural basis for semaphorin signalling through the plexin receptor

scientific article

Structural basis for the cooperative interplay between the two causative gene products of combined factor V and factor VIII deficiency

scientific article

Structural basis of CpG and inhibitory DNA recognition by Toll-like receptor 9

scientific article

Structural basis of the interaction between IgG and fcγ receptors

scientific article published on 01 January 2000

Structural characterization of HypX responsible for CO biosynthesis in the maturation of NiFe-hydrogenase

scientific article published on 18 October 2019

Structural characterization of the circadian clock protein complex composed of KaiB and KaiC by inverse contrast-matching small-angle neutron scattering.

scientific article published on 18 October 2016

Structure and binding mode of a ribosome recycling factor (RRF) from mesophilic bacterium

scientific article

Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization

scientific article

Structure of cytochrome c552 from a moderate thermophilic bacterium, Hydrogenophilus thermoluteolus: comparative study on the thermostability of cytochrome c.

scientific article published in May 2006

SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation.

scientific article

Suppression of Methionine Oxidation of a Pharmaceutical Antibody Stored in a Polymer-Based Syringe

scientific article published on 13 October 2015

Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation

scientific article published on 30 January 2020

Sweeping of adsorbed therapeutic protein on prefillable syringes promotes micron aggregate generation

scientific article published on 5 February 2018

Synergistic Effect of Cavitation and Agitation on Protein Aggregation

scientific article published on 22 November 2016

Synthesis of long Poly(dG).Poly(dC) DNA using enzymatic reaction

scientific article published on 21 September 2004

Target antigen density governs the efficacy of anti-CD20-CD28-CD3 ζ chimeric antigen receptor-modified effector CD8+ T cells

scientific article published on 17 December 2014

Taste substance binding elicits conformational change of taste receptor T1r heterodimer extracellular domains

scientific article (publication date: 10 May 2016)

Temperature-controlled repeatable scrambling and induced-sorting of building blocks between cubic assemblies

scientific article published on 29 March 2019

The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen

scientific article published on 5 February 2008

The Fab portion of immunoglobulin G contributes to its binding to Fcγ receptor III

scientific article published on 16 August 2019

The Fab portion of immunoglobulin G has sites in the CL domain that interact with Fc gamma receptor IIIa

publication published on 01 January 2022

The effect of magnesium ions on chromosome structure as observed by helium ion microscopy

scientific article published on 14 November 2013

The effect of the side chain length of Asp and Glu on coordination structure of Cu(2+) in a de novo designed protein.

scientific article published in November 2009

The middle region of an HP1-binding protein, HP1-BP74, associates with linker DNA at the entry/exit site of nucleosomal DNA

scientific article

The nuclear scaffold protein SAF-A is required for kinetochore-microtubule attachment and contributes to the targeting of Aurora-A to mitotic spindles

scientific article published on February 2011

The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-Pro-Gly units

scientific article

Thermal unfolding mechanism of lipocalin-type prostaglandin D synthase

scientific article published on 11 December 2007

Thermodynamic assessment of domain-domain interactions and in vitro activities of mesophilic and thermophilic ribosome recycling factors

scientific article published in July 2013

Thermodynamic characterization of variants of mesophilic cytochrome c and its thermophilic counterpart

scientific article published in June 2002

Two decades of publishing excellence in pharmaceutical biotechnology

scientific article

pH-Dependent Assembly and Segregation of the Coiled-Coil Segments of Yeast Putative Cargo Receptors Emp46p and Emp47p

scientific article

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