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List of works by Alexandre Almeida

A catalogue of 1,167 genomes from the human gut archaeome

scientific article published on 30 December 2021

A compendium of 32,277 metagenome-assembled genomes and over 80 million genes from the early-life human gut microbiome

scientific article published in 2022

A human gut bacterial genome and culture collection for improved metagenomic analyses

scientific article published on 04 February 2019

A new genomic blueprint of the human gut microbiota

scientific article published on 11 February 2019

A putative type V pilus contributes to biofilm formation capacity

scientific article published on 22 August 2019

A unified catalog of 204,938 reference genomes from the human gut microbiome

scientific article published on 20 July 2020

Application of a Dot Blot Hybridization Platform to Assess Streptococcus uberis Population Structure in Dairy Herds

scientific article published on 24 January 2017

Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments.

scientific article

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

scientific article published on 04 November 2020

Detection and discrimination of common bovine mastitis-causing streptococci

scientific article published on 21 March 2013

Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes

scientific article published on 01 January 2019

Genome watch: Keeping tally in the microbiome

scientific article

MGnify: the microbiome analysis resource in 2020

scientific article published on 01 January 2020

Microbial abundance, activity and population genomic profiling with mOTUs2

scientific article published on 4 March 2019

Parallel Evolution of Group B Streptococcus Hypervirulent Clonal Complex 17 Unveils New Pathoadaptive Mutations.

scientific article published on 5 September 2017

Persistence of a dominant bovine lineage of group B Streptococcus reveals genomic signatures of host adaptation.

scientific article

The Bacteroidetes <i>Aequorivita</i> sp. and <i>Kaistella jeonii</i> Produce Promiscuous Esterases With PET-Hydrolyzing Activity

scientific article published on 01 January 2021

The Mouse Gastrointestinal Bacteria Catalogue enables translation between the mouse and human gut microbiotas via functional mapping

scientific article published on 30 December 2021

Whole-Genome Comparison Uncovers Genomic Mutations between Group B Streptococci Sampled from Infected Newborns and Their Mothers.

scientific article

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