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List of works by Stéfan Engelen

A global ocean atlas of eukaryotic genes.

scientific article published on 25 January 2018

An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity

scientific article published on 09 September 2019

BoardION: real-time monitoring of Oxford Nanopore sequencing instruments

scientific article published on 13 May 2021

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

scientific article

Comparison of library preparation methods reveals their impact on interpretation of metatranscriptomic data

scientific article

Comparison of two African rice species through a new pan-genomic approach on massive data

Convergent genomic signatures of domestication in sheep and goats

scientific article published on 6 March 2018

Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC.

scientific article

Genome assembly using Nanopore-guided long and error-free DNA reads

scientific article published on 20 April 2015

Genome-wide mapping of individual replication fork velocities using nanopore sequencing

scientific article published on 08 June 2022

Information Content of Sets of Biological Sequences Revisited

Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling

scientific article

MicroScope--an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data

scientific article

MicroScope: a platform for microbial genome annotation and comparative genomics

scientific article

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

scientific article published on May 2015

Ocean plankton. Structure and function of the global ocean microbiome

scientific article published on May 2015

Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences

scientific article

TE-Tracker: systematic identification of transposition events through whole-genome resequencing

scientific article

Tfold: efficient in silico prediction of non-coding RNA secondary structures

scientific article

VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity

publication published on 08 November 2021

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

scientific article

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

scientific article

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