List of works - Antonis Chatzinotas

A Generalist Protist Predator Enables Coexistence in Multitrophic Predator-Prey Systems Containing a Phage and the Bacterial Predator Bdellovibrio

scholarly article by Julia Johnke et al published 10 October 2017 in Frontiers in Ecology and Evolution

Alkane-degrading bacteria at the soil-litter interface: comparing isolates with T-RFLP-based community profiles

scientific article published on 11 March 2013

Analysis of Broad-scale Differences in Microbial Community Composition of Two Pristine Forest Soils

article

Analysis of bacterial community structure in bulk soil by in situ hybridization

article

Andalucia (n. gen.)--the deepest branch within jakobids (Jakobida; Excavata), based on morphological and molecular study of a new flagellate from soil

scientific article

Application of qualitative and quantitative real-time PCR, direct sequencing, and terminal restriction fragment length polymorphism analysis for detection and identification of polymicrobial 16S rRNA genes in ascites

scientific article published on 12 March 2014

Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil

scientific article published on 6 November 2009

Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil

scientific article published on 12 July 2013

Beyond nitrogen: phosphorus – estimating the minimum niche dimensionality for resource competition between phytoplankton

scientific article published in 2021

Blind spots in global soil biodiversity and ecosystem function research

scientific article published on 03 August 2020

Community and single cell analyses reveal complex predatory interactions between bacteria in high diversity systems

scientific article published on 16 September 2021

Comparative 16S rDNA and 16S rRNA sequence analysis indicates that Actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil

scientific article published in October 2003

Complete Genome Sequence of Alteromonas Virus vB_AspP-H4/4.

scientific article published on 26 October 2017

Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies

scientific article (publication date: 2017)

Cover Image

Cultivation-independent analysis reveals a shift in ciliate 18S rRNA gene diversity in a polycyclic aromatic hydrocarbon-polluted soil

scientific article

Datathons: fostering equitability in data reuse in ecology

scientific article published in May 2024

Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater

scientific article published on 29 October 2010

Diversity and in situ quantification of Acidobacteria subdivision 1 in an acidic mining lake

scientific article

Diversity of protists and bacteria determines predation performance and stability

scientific article

Drought modulates interactions between arbuscular mycorrhizal fungal diversity and barley genotype diversity

scientific article published on 04 July 2019

Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach

scientific article

Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques

scientific article published on 26 November 2009

Evaluating T-RFLP protocols to sensitively analyze the genetic diversity and community changes of soil alkane degrading bacteria

scholarly article by Julia Giebler et al published November 2014 in European Journal of Soil Biology

Evaluating the assignment of alkB terminal restriction fragments and sequence types to distinct bacterial taxa

scientific article

Evaluation of FT-IR spectroscopy as a tool to quantify bacteria in binary mixed cultures

article

Evaluation of single-nucleotide primer extension for detection and typing of phylogenetic markers used for investigation of microbial communities

scientific article published on 27 February 2009

Evidence for geographic isolation and signs of endemism within a protistan morphospecies

scientific article

Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria.

scientific article

Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing

scientific article published on 16 October 2009

Genetic diversity in chrysophytes: Comparison of different gene markers

article

Genetic diversity of eukaryotic plankton assemblages in Eastern Tibetan Lakes differing by their salinity and altitude

scientific article published on 16 May 2009

Have an Ion on It: The Life-Cycle of Bdellovibrio bacteriovorus Viewed by Helium-Ion Microscopy

scientific article published on 04 November 2018

High diversity of the 'Spumella-like' flagellates: an investigation based on the SSU rRNA gene sequences of isolates from habitats located in six different geographic regions

scientific article published on May 2005

Impacts of heavy metal contamination and phytoremediation on a microbial community during a twelve-month microcosm experiment

scientific article

Improved coverage of fungal diversity in polluted groundwaters by semi-nested PCR.

scientific article

Interactions between predation and disturbances shape prey communities.

scientific article published on 14 February 2018

Interannual variation in land-use intensity enhances grassland multidiversity

scientific article

Internal arsenite bioassay calibration using multiple bioreporter cell lines

scientific article published on March 2008

Isolation of a bacterial consortium able to degrade the fungicide thiabendazole: the key role of a Sphingomonas phylotype

scientific article

Killing the killer: predation between protists and predatory bacteria

scientific article

Kombucha tea fermentation: Microbial and biochemical dynamics

scientific article published on 7 January 2016

Molecular comparison of cultivable protozoa from a pristine and a polycyclic aromatic hydrocarbon polluted site

Molecular phylogeny of litostome ciliates (Ciliophora, Litostomatea) with emphasis on free-living haptorian genera

scientific article

Multiple micro-predators controlling bacterial communities in the environment.

scientific article published on 02 March 2014

Mycelia-Assisted Isolation of Non-Host Bacteria Able to Co-Transport Phages

scientific article published on 21 January 2022

Optimization of preservation conditions of As (III) bioreporter bacteria

scientific article published on 6 February 2009

People, pollution and pathogens - Global change impacts in mountain freshwater ecosystems

scientific article

Phage co-transport with hyphal-riding bacteria fuels bacterial invasion in a water-unsaturated microbial model system

scientific article published on 13 December 2021

Phylogenetic and functional diversity within toluene-degrading, sulphate-reducing consortia enriched from a contaminated aquifer

scientific article

Pilot-scale comparison of constructed wetlands operated under high hydraulic loading rates and attached biofilm reactors for domestic wastewater treatment

scientific article published on 30 January 2009

Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments

scientific article

Predator richness increases the effect of prey diversity on prey yield

scientific article

Primer pairs for the specific environmental detection and T-RFLP analysis of the ubiquitous flagellate taxa Chrysophyceae and Kinetoplastea

scientific article

Root exudate cocktails: the link between plant diversity and soil microorganisms?

scientific article

SSU rRNA gene variation resolves population heterogeneity and ecophysiological differentiation within a morphospecies (Stramenopiles,Chrysophyceae)

article

Short-term disturbance of a grazer has long-term effects on bacterial communities--relevance of trophic interactions for recovery from pesticide effects

scientific article published on 2 May 2010

Single-nucleotide primer extension assay for detection and sequence typing of "Dehalococcoides" spp.

scientific article published on 9 November 2007

Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD).

scientific article published on 10 October 2017

Soil protistology rebooted: 30 fundamental questions to start with

scholarly article by Stefan Geisen et al published August 2017 in Soil Biology and Biochemistry

TAXONOMIC AND ECOLOGICAL CHARACTERIZATION OF STOMATOCYSTS OF SPUMELLA-LIKE FLAGELLATES (CHRYSOPHYCEAE)1

Temperature and stoichiometric dependence of phytoplankton traits

scientific article published on 18 October 2019

The extent of functional redundancy changes as species' roles shift in different environments

scientific article published on 17 November 2015

The influence of environmental factors on protistan microorganisms in grassland soils along a land-use gradient.

scientific article published on 14 August 2015

The single-nucleotide primer extension (SNuPE) method for the multiplex detection of various DNA sequences: from detection of point mutations to microbial ecology

scientific article published on April 2009

Tracing toluene-assimilating sulfate-reducing bacteria using 13C-incorporation in fatty acids and whole-cell hybridization

article published in 2001

Trade-off between taxon diversity and functional diversity in European lake ecosystems

scientific article

Transient recovery dynamics of a predator-prey system under press and pulse disturbances.

scientific article

Trophic complexity in aqueous systems: bacterial species richness and protistan predation regulate dissolved organic carbon and dissolved total nitrogen removal

scientific article published in February 2016

Use of isotopic and molecular techniques to link toluene degradation in denitrifying aquifer microcosms to specific microbial populations.

scientific article published in April 2001

Use of mycelia as paths for the isolation of contaminant-degrading bacteria from soil

scientific article published on 20 October 2011

Visualisation of gradients in arsenic concentrations around individual roots of Zea mays L. using agar-immobilized bioreporter bacteria

Where less may be more: how the rare biosphere pulls ecosystems strings

scientific article

List of works by Antonis Chatzinotas

A Generalist Protist Predator Enables Coexistence in Multitrophic Predator-Prey Systems Containing a Phage and the Bacterial Predator Bdellovibrio

Alkane-degrading bacteria at the soil-litter interface: comparing isolates with T-RFLP-based community profiles

Analysis of Broad-scale Differences in Microbial Community Composition of Two Pristine Forest Soils

Analysis of bacterial community structure in bulk soil by in situ hybridization

Andalucia (n. gen.)--the deepest branch within jakobids (Jakobida; Excavata), based on morphological and molecular study of a new flagellate from soil

Application of qualitative and quantitative real-time PCR, direct sequencing, and terminal restriction fragment length polymorphism analysis for detection and identification of polymicrobial 16S rRNA genes in ascites

Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil

Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil

Beyond nitrogen: phosphorus – estimating the minimum niche dimensionality for resource competition between phytoplankton

Blind spots in global soil biodiversity and ecosystem function research

Community and single cell analyses reveal complex predatory interactions between bacteria in high diversity systems

Comparative 16S rDNA and 16S rRNA sequence analysis indicates that Actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil

Complete Genome Sequence of Alteromonas Virus vB_AspP-H4/4.

Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies

Cover Image

Cultivation-independent analysis reveals a shift in ciliate 18S rRNA gene diversity in a polycyclic aromatic hydrocarbon-polluted soil

Datathons: fostering equitability in data reuse in ecology

Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater

Diversity and in situ quantification of Acidobacteria subdivision 1 in an acidic mining lake

Diversity of protists and bacteria determines predation performance and stability

Drought modulates interactions between arbuscular mycorrhizal fungal diversity and barley genotype diversity

Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach

Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques

Evaluating T-RFLP protocols to sensitively analyze the genetic diversity and community changes of soil alkane degrading bacteria

Evaluating the assignment of alkB terminal restriction fragments and sequence types to distinct bacterial taxa

Evaluation of FT-IR spectroscopy as a tool to quantify bacteria in binary mixed cultures

Evaluation of single-nucleotide primer extension for detection and typing of phylogenetic markers used for investigation of microbial communities

Evidence for geographic isolation and signs of endemism within a protistan morphospecies

Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria.

Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing

Genetic diversity in chrysophytes: Comparison of different gene markers

Genetic diversity of eukaryotic plankton assemblages in Eastern Tibetan Lakes differing by their salinity and altitude

Have an Ion on It: The Life-Cycle of Bdellovibrio bacteriovorus Viewed by Helium-Ion Microscopy

High diversity of the 'Spumella-like' flagellates: an investigation based on the SSU rRNA gene sequences of isolates from habitats located in six different geographic regions

Impacts of heavy metal contamination and phytoremediation on a microbial community during a twelve-month microcosm experiment

Improved coverage of fungal diversity in polluted groundwaters by semi-nested PCR.

Interactions between predation and disturbances shape prey communities.

Interannual variation in land-use intensity enhances grassland multidiversity

Internal arsenite bioassay calibration using multiple bioreporter cell lines

Isolation of a bacterial consortium able to degrade the fungicide thiabendazole: the key role of a Sphingomonas phylotype

Killing the killer: predation between protists and predatory bacteria

Kombucha tea fermentation: Microbial and biochemical dynamics

Molecular comparison of cultivable protozoa from a pristine and a polycyclic aromatic hydrocarbon polluted site

Molecular phylogeny of litostome ciliates (Ciliophora, Litostomatea) with emphasis on free-living haptorian genera

Multiple micro-predators controlling bacterial communities in the environment.

Mycelia-Assisted Isolation of Non-Host Bacteria Able to Co-Transport Phages

Optimization of preservation conditions of As (III) bioreporter bacteria

People, pollution and pathogens - Global change impacts in mountain freshwater ecosystems

Phage co-transport with hyphal-riding bacteria fuels bacterial invasion in a water-unsaturated microbial model system

Phylogenetic and functional diversity within toluene-degrading, sulphate-reducing consortia enriched from a contaminated aquifer

Pilot-scale comparison of constructed wetlands operated under high hydraulic loading rates and attached biofilm reactors for domestic wastewater treatment

Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments

Predator richness increases the effect of prey diversity on prey yield

Primer pairs for the specific environmental detection and T-RFLP analysis of the ubiquitous flagellate taxa Chrysophyceae and Kinetoplastea

Root exudate cocktails: the link between plant diversity and soil microorganisms?

SSU rRNA gene variation resolves population heterogeneity and ecophysiological differentiation within a morphospecies (Stramenopiles,Chrysophyceae)

Short-term disturbance of a grazer has long-term effects on bacterial communities--relevance of trophic interactions for recovery from pesticide effects

Single-nucleotide primer extension assay for detection and sequence typing of "Dehalococcoides" spp.

Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD).

Soil protistology rebooted: 30 fundamental questions to start with

TAXONOMIC AND ECOLOGICAL CHARACTERIZATION OF STOMATOCYSTS OF SPUMELLA-LIKE FLAGELLATES (CHRYSOPHYCEAE)1

Temperature and stoichiometric dependence of phytoplankton traits

The extent of functional redundancy changes as species' roles shift in different environments

The influence of environmental factors on protistan microorganisms in grassland soils along a land-use gradient.

The single-nucleotide primer extension (SNuPE) method for the multiplex detection of various DNA sequences: from detection of point mutations to microbial ecology

Tracing toluene-assimilating sulfate-reducing bacteria using 13C-incorporation in fatty acids and whole-cell hybridization

Trade-off between taxon diversity and functional diversity in European lake ecosystems

Transient recovery dynamics of a predator-prey system under press and pulse disturbances.

Trophic complexity in aqueous systems: bacterial species richness and protistan predation regulate dissolved organic carbon and dissolved total nitrogen removal

Use of isotopic and molecular techniques to link toluene degradation in denitrifying aquifer microcosms to specific microbial populations.

Use of mycelia as paths for the isolation of contaminant-degrading bacteria from soil

Visualisation of gradients in arsenic concentrations around individual roots of Zea mays L. using agar-immobilized bioreporter bacteria

Where less may be more: how the rare biosphere pulls ecosystems strings