List of works by Manish K. Pandey

Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics

scientific article published in December 2013

Advances in Arachis genomics for peanut improvement

scientific article published on 9 November 2011

Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies

scientific article published in November 2012

An international reference consensus genetic map with 897 marker loci based on 11 mapping populations for tetraploid groundnut (Arachis hypogaea L.).

scientific article

Aspergillus flavus infection triggered immune responses and host-pathogen cross-talks in groundnut during in-vitro seed colonization

scientific article published on 29 August 2017

Co-localization of major quantitative trait loci for pod size and weight to a 3.7 cM interval on chromosome A05 in cultivated peanut (Arachis hypogaea L.).

scientific article

Development and Evaluation of a High Density Genotyping 'Axiom_Arachis' Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut

scientific article published on 16 January 2017

Development and deployment of a high-density linkage map identified quantitative trait loci for plant height in peanut (Arachis hypogaea L.).

scientific article published on 20 December 2016

Development of AhMITE1 markers through genome-wide analysis in peanut (Arachis hypogaea L.).

scientific article published on 8 January 2018

Different isoforms of starch-synthesizing enzymes controlling amylose and amylopectin content in rice (Oryza sativa L.).

scientific article published on 31 August 2012

Discovery of Major Quantitative Trait Loci and Candidate Genes for Fresh Seed Dormancy in Groundnut

scientific article published in 2022

Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens

scientific article published on 31 May 2016

Emerging Genomic Tools for Legume Breeding: Current Status and Future Prospects

scientific article published in 2016

Genetic Dissection of Novel QTLs for Resistance to Leaf Spots and Tomato Spotted Wilt Virus in Peanut (Arachis hypogaea L.)

scientific article (publication date: 2017)

Genetic Variation and Association Mapping of Seed-Related Traits in Cultivated Peanut (Arachis hypogaea L.) Using Single-Locus Simple Sequence Repeat Markers

scientific article published on 11 December 2017

Genetic imprints of domestication for disease resistance, oil quality, and yield component traits in groundnut (Arachis hypogaea L.).

scientific article published on 22 November 2018

Genetic mapping for grain quality and yield-attributed traits in Basmati rice using SSR-based genetic map

scientific article published in 2021

Genetic mapping identified major main‐effect and three co‐localized quantitative trait loci controlling high iron and zinc content in groundnut

scientific article published in 2023

Genetic mapping of QTLs controlling fatty acids provided insights into the genetic control of fatty acid synthesis pathway in peanut (Arachis hypogaea L.).

scientific article published on 7 April 2015

Genome-Wide Discovery and Deployment of Insertions and Deletions Markers Provided Greater Insights on Species, Genomes, and Sections Relationships in the Genus Arachis

scientific article published on 19 December 2017

Genome-Wide Discovery of Microsatellite Markers from Diploid Progenitor Species, Arachis duranensis and A. ipaensis, and Their Application in Cultivated Peanut (A. hypogaea).

scientific article published on 18 July 2017

Genome-based trait prediction in multi- environment breeding trials in groundnut

scientific article published in 2020

Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut

scientific article published on 16 December 2016

Genomewide association studies for 50 agronomic traits in peanut using the 'reference set' comprising 300 genotypes from 48 countries of the semi-arid tropics of the world

scientific article published on 20 August 2014

Genomic Tools in Groundnut Breeding Program: Status and Perspectives

scientific article published in 2016

Genomics, genetics and breeding of tropical legumes for better livelihoods of smallholder farmers

scientific article published on 17 April 2018

Genomics-assisted breeding in four major pulse crops of developing countries: present status and prospects

scientific article

Genotyping-by-sequencing based genetic mapping reveals large number of epistatic interactions for stem rot resistance in groundnut

scientific article published on 11 December 2018

Groundnut improvement: use of genetic and genomic tools

scientific article published on 25 February 2013

High-density genetic map using whole-genome re-sequencing for fine mapping and candidate gene discovery for disease resistance in peanut.

scientific article published on 10 April 2018

Identification and Evaluation of Single-Nucleotide Polymorphisms in Allotetraploid Peanut (Arachis hypogaea L.) Based on Amplicon Sequencing Combined with High Resolution Melting (HRM) Analysis

scientific article published on 2 December 2015

Identification and application of a candidate gene AhAftr1 for aflatoxin production resistance in peanut seed (Arachis hypogaea L.)

scientific article published in 2023

Identification of QTLs associated with oil content and mapping FAD2 genes and their relative contribution to oil quality in peanut (Arachis hypogaea L.).

scientific article

Identification of Two Novel Peanut Genotypes Resistant to Aflatoxin Production and Their SNP Markers Associated with Resistance

scientific article published on 01 March 2020

Identification of expressed resistance gene analogs from peanut (Arachis hypogaea L.) expressed sequence tags.

scientific article published on 18 March 2013

Identification of quantitative trait loci for yield and yield related traits in groundnut (Arachis hypogaea L.) under different water regimes in Niger and Senegal

scientific article

Identification of two major quantitative trait locus for fresh seed dormancy using the diversity arrays technology and diversity arrays technology-seq based genetic map in Spanish-type peanuts

scientific article published on 12 April 2016

Improved Genetic Map Identified Major QTLs for Drought Tolerance- and Iron Deficiency Tolerance-Related Traits in Groundnut

scientific article published on 30 December 2020

Integrated consensus map of cultivated peanut and wild relatives reveals structures of the A and B genomes of Arachis and divergence of the legume genomes

scientific article published on 12 January 2013

Mapping Quantitative Trait Loci of Resistance to Tomato Spotted Wilt Virus and Leaf Spots in a Recombinant Inbred Line Population of Peanut (Arachis hypogaea L.) from SunOleic 97R and NC94022.

scientific article published on 18 July 2016

Marker-assisted introgression of a QTL region to improve rust resistance in three elite and popular varieties of peanut (Arachis hypogaea L.).

scientific article published on 14 June 2014

Metabolomics Intervention Towards Better Understanding of Plant Traits

scientific article published in 2021

Molecular Mapping of Oil Content and Fatty Acids Using Dense Genetic Maps in Groundnut (Arachis hypogaea L.).

scientific article published on 22 May 2017

Molecular breeding for introgression of fatty acid desaturase mutant alleles (ahFAD2A and ahFAD2B) enhances oil quality in high and low oil containing peanut genotypes

scientific article published on 28 August 2015

Nested-association mapping (NAM)-based genetic dissection uncovers candidate genes for seed and pod weights in peanut (Arachis hypogaea)

scientific article published on 05 December 2019

Oxidative stress and carbon metabolism influence Aspergillus flavus transcriptome composition and secondary metabolite production

scientific article published on 12 December 2016

Prospects for developing allergen‐depleted food crops

scientific article published in 2023

Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability

scientific article published on 21 February 2018

QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.).

scientific article published on 27 December 2016

Quantitative trait locus analysis and construction of consensus genetic map for foliar disease resistance based on two recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.).

scientific article

Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression

scientific article published on 21 December 2016

SSR markers associated to early leaf spot disease resistance through selective genotyping and single marker analysis in groundnut (Arachis hypogaea L.).

scientific article published on 10 August 2017

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication

scientific article published on 01 May 2019

The genome sequence of segmental allotetraploid peanut Arachis hypogaea

scientific article published on 01 May 2019

Thiourea, a ROS scavenger, regulates source-to-sink relationship to enhance crop yield and oil content in Brassica juncea (L.)

scientific article

Toward the sequence-based breeding in legumes in the post-genome sequencing era.

scientific article published on 17 December 2018

Transcriptome Analysis Identified Coordinated Control of Key Pathways Regulating Cellular Physiology and Metabolism upon <i>Aspergillus flavus</i> Infection Resulting in Reduced Aflatoxin Production in Groundnut

scientific article published on 16 December 2020

Transcriptome Analysis of a New Peanut Seed Coat Mutant for the Physiological Regulatory Mechanism Involved in Seed Coat Cracking and Pigmentation

scientific article published on 14 October 2016

Whole-genome resequencing-based QTL-seq identified candidate genes and molecular markers for fresh seed dormancy in groundnut

scientific article published on 20 October 2019

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