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List of works by Alejandro D. Nadra

A strained DNA binding helix is conserved for site recognition, folding nucleation, and conformational modulation.

scientific article

Apoplastic class III peroxidases PRX62 and PRX69 promote Arabidopsis root hair growth at low temperature

scientific article published on 14 March 2022

Biophysical characterisation of neuroglobin of the icefish, a natural knockout for hemoglobin and myoglobin. Comparison with human neuroglobin

scientific article

CYP21A2 mutation update: Comprehensive analysis of databases and published genetic variants

scientific article published on 16 October 2017

Circadian period integrates network information through activation of the BMP signaling pathway

scientific article

Class III Peroxidases PRX01, PRX44, and PRX73 Control Root Hair Growth in Arabidopsis thaliana

scientific article published on 11 May 2022

Core promoter information content correlates with optimal growth temperature.

scientific article

Crystal structure of I-DmoI in complex with its target DNA provides new insights into meganuclease engineering

scientific article

DNA-binding specificity prediction with FoldX.

scientific article

Design and evaluation of an incoherent feed-forward loop for an arsenic biosensor based on standard iGEM parts

scientific article published on 01 January 2017

Engineered chimeras reveal the structural basis of hexacoordination in globins: a case study of neuroglobin and myoglobin.

scientific article published on 14 October 2014

Exploring the molecular basis of heme coordination in human neuroglobin

scientific article published in May 2008

Free energy contributions to direct readout of a DNA sequence

scientific article published on 5 July 2005

High pressure reveals structural determinants for globin hexacoordination: Neuroglobin and myoglobin cases

scientific article published in June 2009

High-risk (HPV16) human papillomavirus E7 oncoprotein is highly stable and extended, with conformational transitions that could explain its multiple cellular binding partners

scientific article published in August 2002

Indirect DNA readout on the protein side: coupling between histidine protonation, global structural cooperativity, dynamics, and DNA binding of the human papillomavirus type 16 E2C domain.

scientific article

Molecular basis of thermal stability in truncated (2/2) hemoglobins

scientific article published on 02 April 2014

Molecular link between auxin and ROS-mediated polar growth.

scientific article published in May 2017

Protein dynamics and ligand migration interplay as studied by computer simulation.

scientific article published on 23 August 2010

Regulation of PKA activity by an autophosphorylation mechanism in Saccharomyces cerevisiae

scientific article published on 01 September 2014

Solution structure of the HPV-16 E2 DNA binding domain, a transcriptional regulator with a dimeric beta-barrel fold

scientific article published on 01 October 2004

Structure and dynamics of Antarctic fish neuroglobin assessed by computer simulations

scientific article published in March 2011

Structure-based DNA-binding prediction and design.

scientific article

Structure-based activity prediction of CYP21A2 stability variants: A survey of available gene variations.

scientific article published on 14 December 2016

Structure-based analysis of five novel disease-causing mutations in 21-hydroxylase-deficient patients

scientific article

The folding mechanism of a dimeric beta-barrel domain

scientific article

Transcriptomic analysis and molecular docking reveal genes involved in the response of Aedes aegypti larvae to an essential oil extracted from Eucalyptus

scientific article published in 2021

Using protein design algorithms to understand the molecular basis of disease caused by protein-DNA interactions: the Pax6 example

scientific article

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