List of works - Mohammad Bahram

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

scientific article published on 15 July 2010

A single European aspen (Populus tremula) tree individual may potentially harbour dozens of Cenococcum geophilum ITS genotypes and hundreds of species of ectomycorrhizal fungi

scientific article

Alpine bistort (Bistorta vivipara) in edge habitat associates with fewer but distinct ectomycorrhizal fungal species: a comparative study of three contrasting soil environments in Svalbard

scientific article published on 20 June 2016

Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)

scientific article (publication date: 26 September 2016)

Bacterial Communities in Boreal Forest Mushrooms Are Shaped Both by Soil Parameters and Host Identity

scientific article published on 10 May 2017

Best practices in metabarcoding of fungi: From experimental design to results

scientific article published on 08 April 2022

Biogeography of ectomycorrhizal fungi associated with alders (Alnus spp.) in relation to biotic and abiotic variables at the global scale

scientific article

Complex effects of mammalian grazing on extramatrical mycelial biomass in the Scandes forest-tundra ecotone

scientific article

Connecting the multiple dimensions of global soil fungal diversity

scientific article published in December 2023

Correction to: FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles

scientific article published in 2021

Does host plant richness explain diversity of ectomycorrhizal fungi? Re-evaluation of Gao et al. (2013) data sets reveals sampling effects

scientific article

Ectomycorrhizal and saprotrophic fungi respond differently to long-term experimentally increased snow depth in the High Arctic

scientific article

Ectomycorrhizal fungi of exotic pine plantations in relation to native host trees in Iran: evidence of host range expansion by local symbionts to distantly related host taxa

scientific article

Ectomycorrhizal impacts on plant nitrogen nutrition: emerging isotopic patterns, latitudinal variation and hidden mechanisms

scientific article published on 30 October 2014

Enzymatic activities and stable isotope patterns of ectomycorrhizal fungi in relation to phylogeny and exploration types in an afrotropical rain forest ⬇️

scientific article published on July 3, 2012

Evolution of nutritional modes of Ceratobasidiaceae (Cantharellales, Basidiomycota) as revealed from publicly available ITS sequences

scientific article published in 2013

FUNGAL BIOGEOGRAPHY. Response to Comment on "Global diversity and geography of soil fungi".

scientific article published on 27 August 2015

Fungal biogeography. Global diversity and geography of soil fungi

scientific article

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

scientific article published in November 2020

Fungi as mediators linking organisms and ecosystems

scientific article published in 2021

Genomics and metagenomics technologies to recover ribosomal DNA and single-copy genes from old fruit-body and ectomycorrhiza specimens

scientific article

Global biogeography of Alnus-associated Frankia actinobacteria

scientific article

Global biogeography of the ectomycorrhizal /sebacina lineage (Fungi, Sebacinales) as revealed from comparative phylogenetic analyses

scientific article

Global patterns in endemicity and vulnerability of soil fungi

scientific article published in 2022

Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding

scientific article published in 2018

High-level classification of the Fungi and a tool for evolutionary ecological analyses

scientific article published on 16 May 2018

Host diversity and trophic status as determinants of species richness and community composition of fungus gnats

article

Host genetic variation strongly influences the microbiome structure and function in fungal fruiting-bodies

scientific article published on 14 February 2018

Host preference and network properties in biotrophic plant-fungal associations

scientific article published on 22 November 2017

How mycorrhizal associations drive plant population and community biology

scientific article published on 01 February 2020

Improving ITS sequence data for identification of plant pathogenic fungi

article

Local-scale biogeography and spatiotemporal variability in communities of mycorrhizal fungi

scientific article published on March 2015

Local-scale spatial structure and community composition of orchid mycorrhizal fungi in semi-natural grasslands

scientific article published on 30 December 2016

Low diversity and high host preference of ectomycorrhizal fungi in western Amazonia, a neotropical biodiversity hotspot

scientific article

Metagenomic assessment of the global distribution of bacteria and fungi

scientific article published on 13 November 2020

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes

scientific article

Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment

scientific article published on 12 September 2018

Niche partitioning in arbuscular mycorrhizal communities in temperate grasslands: a lesson from adjacent serpentine and nonserpentine habitats

scientific article published in April 2015

Novel soil-inhabiting clades fill gaps in the fungal tree of life

scientific article

Phylogenetic relationships among host plants explain differences in fungal species richness and community composition in ectomycorrhizal symbiosis ⬇️

scientific article published on May 21, 2013

PipeCraft: Flexible open-source toolkit for bioinformatics analysis of custom high-throughput amplicon sequencing data

scientific article

Plant nutrient-acquisition strategies drive topsoil microbiome structure and function

scientific article published on 12 April 2020

Plant species richness and productivity determine the diversity of soil fungal guilds in temperate coniferous forest and bog habitats

scientific article

Pole-to-Pole Connections: Similarities between Arctic and Antarctic Microbiomes and Their Vulnerability to Environmental Change

scientific article published in 2017

Publisher Correction: Soil health is associated with higher primary productivity across Europe

scientific article published on 4 September 2024

Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran ⬇️

scientific article published on October 11, 2011

Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe

scientific article published on 04 September 2020

Revision of the genus Restingomyces, including two new species from Mexico

scholarly article published in 2021

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

scientific article

Spatial structure and the effects of host and soil environments on communities of ectomycorrhizal fungi in wooded savannas and rain forests of Continental Africa and Madagascar ⬇️

scientific article published on June 7, 2011

Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment

scientific article published on 22 September 2015

Structure and function of the global topsoil microbiome

scientific article published in Nature

Structure and function of the soil microbiome underlying N2O emissions from global wetlands

scientific article published in 2022

Temperature and pH define the realised niche space of arbuscular mycorrhizal fungi

scientific article

Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic

scientific article published on 7 November 2015

The Global Soil Mycobiome consortium dataset for boosting fungal diversity research ⬇️

scholarly article published in 2021

The distance decay of similarity in communities of ectomycorrhizal fungi in different ecosystems and scales

scientific article published on 28 August 2013

The genome and microbiome of a dikaryotic fungus (Inocybe terrigena, Inocybaceae) revealed by metagenomics

scientific article published on 12 January 2018

Top 50 most wanted fungi

scientific article

Towards a unified paradigm for sequence-based identification of fungi

scientific article

Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

scientific article

Tree diversity and species identity effects on soil fungi, protists and animals are context dependent

scientific article published on 14 July 2015

Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem

scientific article

Two new species of Trichoglossum (Geoglossaceae, Ascomycota) from south Mexico

scientific article published in 2022

List of works by Mohammad Bahram

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

A single European aspen (Populus tremula) tree individual may potentially harbour dozens of Cenococcum geophilum ITS genotypes and hundreds of species of ectomycorrhizal fungi

Alpine bistort (Bistorta vivipara) in edge habitat associates with fewer but distinct ectomycorrhizal fungal species: a comparative study of three contrasting soil environments in Svalbard

Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)

Bacterial Communities in Boreal Forest Mushrooms Are Shaped Both by Soil Parameters and Host Identity

Best practices in metabarcoding of fungi: From experimental design to results

Biogeography of ectomycorrhizal fungi associated with alders (Alnus spp.) in relation to biotic and abiotic variables at the global scale

Complex effects of mammalian grazing on extramatrical mycelial biomass in the Scandes forest-tundra ecotone

Connecting the multiple dimensions of global soil fungal diversity

Correction to: FungalTraits: a user friendly traits database of fungi and fungus-like stramenopiles

Does host plant richness explain diversity of ectomycorrhizal fungi? Re-evaluation of Gao et al. (2013) data sets reveals sampling effects

Ectomycorrhizal and saprotrophic fungi respond differently to long-term experimentally increased snow depth in the High Arctic

Ectomycorrhizal fungi of exotic pine plantations in relation to native host trees in Iran: evidence of host range expansion by local symbionts to distantly related host taxa

Ectomycorrhizal impacts on plant nitrogen nutrition: emerging isotopic patterns, latitudinal variation and hidden mechanisms

Enzymatic activities and stable isotope patterns of ectomycorrhizal fungi in relation to phylogeny and exploration types in an afrotropical rain forest ⬇️

Evolution of nutritional modes of Ceratobasidiaceae (Cantharellales, Basidiomycota) as revealed from publicly available ITS sequences

FUNGAL BIOGEOGRAPHY. Response to Comment on "Global diversity and geography of soil fungi".

Fungal biogeography. Global diversity and geography of soil fungi

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

Fungi as mediators linking organisms and ecosystems

Genomics and metagenomics technologies to recover ribosomal DNA and single-copy genes from old fruit-body and ectomycorrhiza specimens

Global biogeography of Alnus-associated Frankia actinobacteria

Global biogeography of the ectomycorrhizal /sebacina lineage (Fungi, Sebacinales) as revealed from comparative phylogenetic analyses

Global patterns in endemicity and vulnerability of soil fungi

Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding

High-level classification of the Fungi and a tool for evolutionary ecological analyses

Host diversity and trophic status as determinants of species richness and community composition of fungus gnats

Host genetic variation strongly influences the microbiome structure and function in fungal fruiting-bodies

Host preference and network properties in biotrophic plant-fungal associations

How mycorrhizal associations drive plant population and community biology

Improving ITS sequence data for identification of plant pathogenic fungi

Local-scale biogeography and spatiotemporal variability in communities of mycorrhizal fungi

Local-scale spatial structure and community composition of orchid mycorrhizal fungi in semi-natural grasslands

Low diversity and high host preference of ectomycorrhizal fungi in western Amazonia, a neotropical biodiversity hotspot

Metagenomic assessment of the global distribution of bacteria and fungi

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes

Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment

Niche partitioning in arbuscular mycorrhizal communities in temperate grasslands: a lesson from adjacent serpentine and nonserpentine habitats

Novel soil-inhabiting clades fill gaps in the fungal tree of life

Phylogenetic relationships among host plants explain differences in fungal species richness and community composition in ectomycorrhizal symbiosis ⬇️

PipeCraft: Flexible open-source toolkit for bioinformatics analysis of custom high-throughput amplicon sequencing data

Plant nutrient-acquisition strategies drive topsoil microbiome structure and function

Plant species richness and productivity determine the diversity of soil fungal guilds in temperate coniferous forest and bog habitats

Pole-to-Pole Connections: Similarities between Arctic and Antarctic Microbiomes and Their Vulnerability to Environmental Change

Publisher Correction: Soil health is associated with higher primary productivity across Europe

Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran ⬇️

Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe

Revision of the genus Restingomyces, including two new species from Mexico

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

Spatial structure and the effects of host and soil environments on communities of ectomycorrhizal fungi in wooded savannas and rain forests of Continental Africa and Madagascar ⬇️

Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment

Structure and function of the global topsoil microbiome

Structure and function of the soil microbiome underlying N2O emissions from global wetlands

Temperature and pH define the realised niche space of arbuscular mycorrhizal fungi

Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic

The Global Soil Mycobiome consortium dataset for boosting fungal diversity research ⬇️

The distance decay of similarity in communities of ectomycorrhizal fungi in different ecosystems and scales

The genome and microbiome of a dikaryotic fungus (Inocybe terrigena, Inocybaceae) revealed by metagenomics

Top 50 most wanted fungi

Towards a unified paradigm for sequence-based identification of fungi

Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

Tree diversity and species identity effects on soil fungi, protists and animals are context dependent

Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem

﻿Two new species of Trichoglossum (Geoglossaceae, Ascomycota) from south Mexico

Two new species of Trichoglossum (Geoglossaceae, Ascomycota) from south Mexico