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List of works by Sarah Cobey

1203. Epidemiology of Respiratory Viruses in Influenza-Vaccinated Healthcare Workers During an H1N1-Dominant Season

Age-specific differences in the dynamics of protective immunity to influenza

Age-specific differences in the dynamics of protective immunity to influenza

Capturing escape in infectious disease dynamics

scientific article published on 19 August 2008

Characterization of the immunologic repertoire: A quick start guide

scientific article published on 01 July 2018

Comparison of human H3N2 antibody responses elicited by egg-based, cell-based, and recombinant protein-based influenza vaccines during the 2017-2018 season

scientific article published on 09 October 2019

Consequences of host heterogeneity, epitope immunodominance, and immune breadth for strain competition ⬇️

scientific article published on November 18, 2010

Contemporary H3N2 influenza viruses have a glycosylation site that alters binding of antibodies elicited by egg-adapted vaccine strains.

scientific article published on 6 November 2017

CpG-creating mutations are costly in many human viruses

scientific article published on 24 April 2020

Does influenza drive absolute humidity?

scientific article published on 15 March 2017

Earliest infections predict the age distribution of seasonal influenza A cases

scientific article published on 07 July 2020

Ecological factors driving the long-term evolution of influenza's host range

scientific article published on 5 May 2010

Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans

scientific article

Estimating Vaccine-Driven Selection in Seasonal Influenza

article

Explaining the geographical origins of seasonal influenza A (H3N2).

scientific article published in September 2016

Fighting microbial drug resistance: a primer on the role of evolutionary biology in public health

scientific article published on 23 March 2015

Global migration dynamics underlie evolution and persistence of human influenza A (H3N2)

scientific article published in May 2010

Host population structure and treatment frequency maintain balancing selection on drug resistance

scientific article

Immune History and Influenza Vaccine Effectiveness

Immune history and influenza virus susceptibility

scientific article published on 12 January 2017

Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010

scientific article published on 01 September 2013

Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010.

scientific article

Influenza Virus Vaccination Elicits Poorly Adapted B Cell Responses in Elderly Individuals

scientific article published on 19 February 2019

Investigate the origins of COVID-19

scientific article

K-Pax2: Bayesian identification of cluster-defining amino acid positions in large sequence datasets

scientific article published on 15 July 2015

Limits to Causal Inference with State-Space Reconstruction for Infectious Disease ⬇️

scientific article

Lineage-specific protection and immune imprinting shape the age distributions of influenza B cases

scientific article published on 14 July 2021

Middle-aged individuals may be in a perpetual state of H3N2 influenza virus susceptibility

scientific article published on 11 September 2020

Model-informed COVID-19 vaccine prioritization strategies by age and serostatus

scientific article published on 07 December 2020

Modeling infectious disease dynamics

scientific article published on 24 April 2020

Niche and neutral effects of acquired immunity permit coexistence of pneumococcal serotypes

scientific article published in March 2012

Pathogen diversity and hidden regimes of apparent competition

scientific article

Pathogen evolution and the immunological niche

scientific article

Poor immunogenicity, not vaccine strain egg adaptation, may explain the low H3N2 influenza vaccine effectiveness in 2012-13.

scientific article published on 20 February 2018

Practical considerations for measuring the effective reproductive number, Rt

scientific article published on 20 June 2020

Practical considerations for measuring the effective reproductive number, Rt

scientific article published on 10 December 2020

Predicting the epidemic sizes of influenza A/H1N1, A/H3N2, and B: a statistical method

scientific article

Preexisting immunity shapes distinct antibody landscapes after influenza virus infection and vaccination in humans

scientific article published on 01 December 2020

Recurring infection with ecologically distinct HPV types can explain high prevalence and diversity

scientific article published on 5 December 2017

Repeated Vaccination May Protect Children From Influenza Infection

scientific article published on 05 October 2018

Response to Skowronski and De Serres

scholarly article by Sarah Cobey & Yonatan H Grad published 15 October 2018 in Clinical Infectious Diseases

SARS-CoV-2 Testing in Florida, Illinois, and Maryland: Access and Barriers

scientific article published on 24 December 2020

Selection and Neutral Mutations Drive Pervasive Mutability Losses in Long-Lived Anti-HIV B-Cell Lineages.

scientific article published in May 2018

Sick if you do, sick if you don't

scientific article published on 01 November 2017

Spec-seq unveils transcriptional subpopulations of antibody-secreting cells following influenza vaccination

scientific article published on 19 November 2018

Strength and tempo of selection revealed in viral gene genealogies

scientific article

The Hospital Microbiome Project: Meeting report for the 2nd Hospital Microbiome Project, Chicago, USA, January 15(th), 2013.

scientific article

The evolution within us

scientific article

Trade-offs in antibody repertoires to complex antigens

scientific article published in September 2015

Use of an individual-based model of pneumococcal carriage for planning a randomized trial of a whole-cell vaccine

scholarly article by Francisco Y. Cai published in October 2018

Viral factors in influenza pandemic risk assessment.

scientific article

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