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List of works by Jonathan Thorsen

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Fish Oil-Derived Fatty Acids in Pregnancy and Wheeze and Asthma in Offspring

scientific article
Maturation of the gut microbiome and risk of asthma in childhood

scientific article published on 10 January 2018
The Follicular Skin Microbiome in Patients With Hidradenitis Suppurativa and Healthy Controls

scientific article published on 24 May 2017
Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies.

scientific article
Cesarean section changes neonatal gut colonization

scientific article published on April 1, 2016
CDHR3 Genetics and Rhinovirus C Respiratory Illnesses

scientific article published on 9 November 2017
The developing hypopharyngeal microbiota in early life

scientific article published on 30 December 2016
Genome-wide association and HLA fine-mapping studies identify risk loci and genetic pathways underlying allergic rhinitis

scholarly article by Johannes Waage et al published August 2018 in Nature Genetics
Antibiotics in Pregnancy Increase Children's Risk of Otitis Media and Ventilation Tubes

scientific article published on 11 January 2017
Effect of fish oil supplementation in pregnancy on bone, lean, and fat mass at six years: randomised clinical trial

scientific article published in the British Medical Journal
Short- and long-term impacts of azithromycin treatment on the gut microbiota in children: A double-blind, randomized, placebo-controlled trial

scientific article published on 23 November 2018
The microbiome of tunnels in hidradenitis suppurativa patients

scientific article published on 06 May 2019
Infant airway microbiota and topical immune perturbations in the origins of childhood asthma

scientific article published on 01 November 2019
Neonates colonized with pathogenic bacteria in the airways have a low-grade systemic inflammation

scientific article
Genetic, Clinical, and Environmental Factors Associated With Persistent Atopic Dermatitis in Childhood

Levels of Systemic Low-grade Inflammation in Pregnant Mothers and Their Offspring are Correlated

scientific article published on 28 February 2019
Publisher Correction: Maturation of the gut microbiome and risk of asthma in childhood

scientific article published on 13 February 2018
Moderate to severe hidradenitis suppurativa patients do not have an altered bacterial composition in peripheral blood compared to healthy controls.

scientific article
Universal Dermal Microbiome in Human Skin

scientific article published on 11 February 2020
A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples

scientific article published on 20 July 2019
Ecological succession in the vaginal microbiota during pregnancy and birth

scientific article published on 02 June 2020
Author Correction: Genome-wide association and HLA fine-mapping studies identify risk loci and genetic pathways underlying allergic rhinitis

scientific article published on 01 September 2018
Effect of High-Dose vs Standard-Dose Vitamin D Supplementation in Pregnancy on Bone Mineralization in Offspring Until Age 6 Years: A Prespecified Secondary Analysis of a Double-Blinded, Randomized Clinical Trial

scientific article published on 24 February 2020
Hundreds of viral families in the healthy infant gut

Middle ear effusion, ventilation tubes and neurological development in childhood

scientific article published in 2023
Author response: Modeling transfer of vaginal microbiota from mother to infant in early life

Prenatal dietary supplements influence the infant airway microbiota in a randomized factorial clinical trial

scientific article published on 22 January 2020
Large-scale association analyses identify host factors influencing human gut microbiome composition

scientific article published on 18 January 2021
The Airway Microbiota Modulates Effect of Azithromycin Treatment for Episodes of Recurrent Asthma-like Symptoms in Preschool Children: A Randomized Clinical Trial

scientific article published on 15 July 2021
MAGinator enables strain-level quantification ofde novoMAGs

MAGinator enables accurate profiling of de novo MAGs with strain-level phylogenies

scientific article published on 9 July 2024
Urbanized microbiota in infants, immune constitution and later risk of atopic diseases

scientific article published on 15 December 2020
Delivery mode and gut microbial changes correlate with an increased risk of childhood asthma

scientific article published on 01 November 2020
Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults

scientific article published on 22 December 2023
Prophages in the infant gut are induced and modulate the functionality of their hosts

The infant gut virome is associated with preschool asthma risk independently of bacteria

scientific article published on 15 December 2023
Infantile colic is associated with development of later constipation and atopic disorders

scientific article published on 19 August 2024
Noninvasive Sampling of Mucosal Lining Fluid for the Quantification of In Vivo Upper Airway Immune-mediator Levels

scientific article
Asthma and Wheeze Severity and the Oropharyngeal Microbiota in Children and Adolescents

scientific article published in December 2022
Predictive Metagenomic Analysis Reveals a Role of Cutaneous Dysbiosis in the Development of Hidradenitis Suppurativa

scientific article published on 12 December 2019
The influence of early life exposures on the infant gut virome

scientific article published on 21 May 2025
Determinants of neurodevelopment in early childhood – results from the copenhagen prospective studies on asthma in childhood ( COPSAC 2010 ) mother–child cohort

scientific article published on 21 March 2019
Modeling transfer of vaginal microbiota from mother to infant in early life

scientific article published on 15 January 2021
Expanding known viral diversity in the healthy infant gut

scientific article published on 10 April 2023
The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria

scientific article published on 20 October 2023
Hundreds of viral families in the healthy infant gut

Prophages in the infant gut are pervasively induced and may modulate the functionality of their hosts

scientific article published on 19 March 2025

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