List of works - Rob I. Griffiths

13CO2 pulse labelling of plants in tandem with stable isotope probing: methodological considerations for examining microbial function in the rhizosphere.

scientific article published in July 2004

A method of establishing a transect for biodiversity and ecosystem function monitoring across Europe

scholarly article by D. Stone et al published January 2016 in Applied Soil Ecology

Bacterial Physiological Adaptations to Contrasting Edaphic Conditions Identified Using Landscape Scale Metagenomics.

scientific article

Catchment-scale biogeography of riverine bacterioplankton

scientific article

Climate change alters temporal dynamics of alpine soil microbial functioning and biogeochemical cycling via earlier snowmelt

scientific article published on 22 February 2021

Closely related protist strains have different grazing impacts on natural bacterial communities.

scientific article published in December 2010

Co-located ecological data for exploring top- and subsoil carbon dynamics across grassland-woodland contrasts

scientific article published in 2024

Comparison of greenhouse gas fluxes from tropical forests and oil palm plantations on mineral soil

scientific article published in 2021

Detecting macroecological patterns in bacterial communities across independent studies of global soils.

scientific article published on 20 November 2017

Differences in soil micro-eukaryotic communities over soil pH gradients are strongly driven by parasites and saprotrophs

scientific article published on 15 January 2016

Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems

scientific article published on 07 March 2019

Ecological consequences of ingestion of Bacillus cereus on Bacillus thuringiensis infections and on the gut flora of a lepidopteran host.

scientific article published on 27 April 2008

Ecological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe

article

Effects of sieving, drying and rewetting upon soil bacterial community structure and respiration rates.

scientific article

Environmental and microbial controls on microbial necromass recycling, an important precursor for soil carbon stabilization

scientific article published on 22 October 2020

Evaluation of the ISO standard 11063 DNA extraction procedure for assessing soil microbial abundance and community structure

scientific article

Evolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community

scientific article published on 03 September 2020

Field scale molecular analysis for the monitoring of bacterial community structures during on-site diesel bioremediation.

scientific article

Functional and compositional comparison of two activated sludge communities remediating coking effluent.

scientific article published in May 2005

Global change pressures on soils from land use and management

scientific article published on 24 August 2015

Grassland biodiversity restoration increases resistance of carbon fluxes to drought

scientific article published on 19 April 2019

Harnessing rhizosphere microbiomes for drought-resilient crop production

scientific article published on 01 April 2020

Insights into the fate of a 13C labelled phenol pulse for stable isotope probing (SIP) experiments.

scientific article published on 21 February 2007

Land use driven change in soil pH affects microbial carbon cycling processes

scientific article published in Nature Communications

Long-Term Drought and Warming Alter Soil Bacterial and Fungal Communities in an Upland Heathland

scientific article published on 19 October 2021

Long‐term cattle grazing shifts the ecological state of forest soils

scientific article published in 2022

Niche specialization of terrestrial archaeal ammonia oxidizers

scientific article published on 8 December 2011

PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform

scientific article published on 25 May 2015

Plant diversity increases soil microbial activity and soil carbon storage

scientific article published on 7 April 2015

Plant soil interactions alter carbon cycling in an upland grassland soil.

scientific article

Plants with arbuscular mycorrhizal fungi efficiently acquire Nitrogen from substrate additions by shaping the decomposer community composition and their net plant carbon demand

scientific article published on 29 March 2022

Protists have divergent effects on bacterial diversity along a productivity gradient

scientific article published on 10 March 2010

RNA stable isotope probing, a novel means of linking microbial community function to phylogeny.

scientific article published on November 2002

Raman microscopic analysis of single microbial cells.

scientific article

Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function.

scientific article

Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition

scientific article

Relative contribution of high and low elevation soil microbes and nematodes to ecosystem functioning

scientific article published on 08 January 2022

Rhizosphere bacterial carbon turnover is higher in nucleic acids than membrane lipids: implications for understanding soil carbon cycling

scientific article

Shrub expansion modulates belowground impacts of changing snow conditions in alpine grasslands

scientific article published in 2021

Soil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling

scientific article

Soil bacterial networks are less stable under drought than fungal networks

scientific article published in Nature Communications

Soil microbiomes show consistent and predictable responses to extreme events

scientific article published on 27 November 2024

Soil networks become more connected and take up more carbon as nature restoration progresses.

scientific article

Soil parameters, land use, and geographical distance drive soil bacterial communities along a European transect

scientific article published in Scientific Reports

The bacterial biogeography of British soils.

scientific article

The effect of root‐associated microbes on plant growth and chemical defence traits across two contrasted elevations

scientific article published on 30 May 2020

Vegetation affects the relative abundances of dominant soil bacterial taxa and soil respiration rates in an upland grassland soil.

scientific article published on 25 August 2009

Vegetation exerts a greater control on litter decomposition than climate warming in peatlands

scientific article

Zones of influence for soil organic matter dynamics: A conceptual framework for data and models

scientific article published on 28 August 2019

List of works by Rob I. Griffiths

13CO2 pulse labelling of plants in tandem with stable isotope probing: methodological considerations for examining microbial function in the rhizosphere.

A method of establishing a transect for biodiversity and ecosystem function monitoring across Europe

Bacterial Physiological Adaptations to Contrasting Edaphic Conditions Identified Using Landscape Scale Metagenomics.

Catchment-scale biogeography of riverine bacterioplankton

Climate change alters temporal dynamics of alpine soil microbial functioning and biogeochemical cycling via earlier snowmelt

Closely related protist strains have different grazing impacts on natural bacterial communities.

Co-located ecological data for exploring top- and subsoil carbon dynamics across grassland-woodland contrasts

Comparison of greenhouse gas fluxes from tropical forests and oil palm plantations on mineral soil

Detecting macroecological patterns in bacterial communities across independent studies of global soils.

Differences in soil micro-eukaryotic communities over soil pH gradients are strongly driven by parasites and saprotrophs

Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems

Ecological consequences of ingestion of Bacillus cereus on Bacillus thuringiensis infections and on the gut flora of a lepidopteran host.

Ecological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe

Effects of sieving, drying and rewetting upon soil bacterial community structure and respiration rates.

Environmental and microbial controls on microbial necromass recycling, an important precursor for soil carbon stabilization

Evaluation of the ISO standard 11063 DNA extraction procedure for assessing soil microbial abundance and community structure

Evolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community

Field scale molecular analysis for the monitoring of bacterial community structures during on-site diesel bioremediation.

Functional and compositional comparison of two activated sludge communities remediating coking effluent.

Global change pressures on soils from land use and management

Grassland biodiversity restoration increases resistance of carbon fluxes to drought

Harnessing rhizosphere microbiomes for drought-resilient crop production

Insights into the fate of a 13C labelled phenol pulse for stable isotope probing (SIP) experiments.

Land use driven change in soil pH affects microbial carbon cycling processes

Long-Term Drought and Warming Alter Soil Bacterial and Fungal Communities in an Upland Heathland

Long‐term cattle grazing shifts the ecological state of forest soils

Niche specialization of terrestrial archaeal ammonia oxidizers

PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform

Plant diversity increases soil microbial activity and soil carbon storage

Plant soil interactions alter carbon cycling in an upland grassland soil.

Plants with arbuscular mycorrhizal fungi efficiently acquire Nitrogen from substrate additions by shaping the decomposer community composition and their net plant carbon demand

Protists have divergent effects on bacterial diversity along a productivity gradient

RNA stable isotope probing, a novel means of linking microbial community function to phylogeny.

Raman microscopic analysis of single microbial cells.

Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function.

Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition

Relative contribution of high and low elevation soil microbes and nematodes to ecosystem functioning

Rhizosphere bacterial carbon turnover is higher in nucleic acids than membrane lipids: implications for understanding soil carbon cycling

Shrub expansion modulates belowground impacts of changing snow conditions in alpine grasslands

Soil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling

Soil bacterial networks are less stable under drought than fungal networks

Soil microbiomes show consistent and predictable responses to extreme events

Soil networks become more connected and take up more carbon as nature restoration progresses.

Soil parameters, land use, and geographical distance drive soil bacterial communities along a European transect

The bacterial biogeography of British soils.

The effect of root‐associated microbes on plant growth and chemical defence traits across two contrasted elevations

Vegetation affects the relative abundances of dominant soil bacterial taxa and soil respiration rates in an upland grassland soil.

Vegetation exerts a greater control on litter decomposition than climate warming in peatlands

Zones of influence for soil organic matter dynamics: A conceptual framework for data and models