Search filters

List of works by Fabien Jourdan

1H-NMR metabolomics response to a realistic diet contamination with the mycotoxin deoxynivalenol: Effect of probiotics supplementation

scientific article published on 04 March 2020

A Computational Solution to Automatically Map Metabolite Libraries in the Context of Genome Scale Metabolic Networks

scientific article

A large-scale modelling approach reveals functional metabolic shifts during hepatic differentiation

An Untargeted Metabolomics Approach to Investigate the Metabolic Modulations of HepG2 Cells Exposed to Low Doses of Bisphenol A and 17β-Estradiol

Arterio-venous metabolomics exploration reveals major changes across liver and intestine in the obese Yucatan minipig

scientific article published on 29 August 2019

Bisphenol A Exposure Disrupts Neurotransmitters Through Modulation of Transaminase Activity in the Brain of Rodents

scientific article published on May 2016

Can we trust untargeted metabolomics? Results of the metabo-ring initiative, a large-scale, multi-instrument inter-laboratory study.

scientific article published on 14 October 2014

Challenges and perspectives for naming lipids in the context of lipidomics

scholarly article

Computational methods to identify metabolic sub-networks based on metabolomic profiles.

scientific article published on 27 January 2016

Dynamic Metabolic Disruption in Rats Perinatally Exposed to Low Doses of Bisphenol-A.

scientific article published on 30 October 2015

ELIXIR and Toxicology: a community in development

ELIXIR and Toxicology: a community in development

scientific article published on 3 October 2023

Flux Analysis of the Trypanosoma brucei Glycolysis Based on a Multiobjective-Criteria Bioinformatic Approach

scientific article

Gaining Insights Into Metabolic Networks Using Chemometrics and Bioinformatics: Chronic Kidney Disease as a Clinical Model

scientific article published on 14 May 2021

Graph methods for the investigation of metabolic networks in parasitology

scientific article published on 06 May 2010

IDH1 Mutation Enhances Catabolic Flexibility and Mitochondrial Dependencies to Favor Drug Resistance in Acute Myeloid Leukemia

scholarly article

Improving lipid mapping in Genome Scale Metabolic Networks using ontologies

scientific article published on 25 March 2020

Inhibition of enteric methanogenesis in dairy cows induces changes in plasma metabolome highlighting metabolic shifts and potential markers of emission

scientific article published on 24 September 2020

Integrated transcriptomics and metabolomics reveal signatures of lipid metabolism dysregulation in HepaRG liver cells exposed to PCB 126

scholarly article by Robin Mesnage et al published August 2018 in Archives of Toxicology

Intuitive visualization and analysis of multi-omics data and application to Escherichia coli carbon metabolism

scientific article

Large-Scale Modeling Approach Reveals Functional Metabolic Shifts during Hepatic Differentiation

MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

scientific article published on 5 May 2010

MetExplore: collaborative edition and exploration of metabolic networks

scientific article published on 30 April 2018

MetExploreViz: web component for interactive metabolic network visualization

scientific article published on 15 September 2017

MetaNetter 2: A Cytoscape plugin for ab initio network analysis and metabolite feature classification

scientific article published on 23 September 2017

MetaNetter: inference and visualization of high-resolution metabolomic networks.

scientific article published on 14 November 2007

MetaboRank: network-based recommendation system to interpret and enrich metabolomics results

scientific article published on 01 January 2019

Metabolic network visualization eliminating node redundance and preserving metabolic pathways

scientific article

Mind the Gap: Mapping Mass Spectral Databases in Genome-Scale Metabolic Networks Reveals Poorly Covered Areas

scholarly article by Clément Frainay published in September 2018

Multiplatform metabolomics for an integrative exploration of metabolic syndrome in older men

scientific article published on 20 June 2021

Networks and Graphs Discovery in Metabolomics Data Analysis and Interpretation

scientific article published on 08 March 2022

PathIntegrate: Multivariate modelling approaches for pathway-based multi-omics data integration

scientific article published on 25 March 2024

Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis

scientific article published on 7 September 2021

PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management

scientific article published in 2022

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

scholarly article by Kristian Peters et al published 7 December 2018 in GigaScience

Postprandial NMR-Based Metabolic Exchanges Reflect Impaired Phenotypic Flexibility across Splanchnic Organs in the Obese Yucatan Mini-Pig

scientific article published on 14 August 2020

ProbMetab: an R package for Bayesian probabilistic annotation of LC-MS-based metabolomics

scientific article

Recommender system embedded in metabolic network visualization

conference poster

Scaling-up metabolomics: Current state and perspectives

scientific article published in 2023

Targeted versus untargeted omics - the CAFSA story

scientific article published on 8 February 2018

Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure

scientific article

Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets

article

The GOLIATH Project: Towards an Internationally Harmonised Approach for Testing Metabolism Disrupting Compounds ⬇️

scientific article published on 14 May 2020

The future of metabolomics in ELIXIR

scientific article published in 2017

The future of metabolomics in ELIXIR.

scientific article

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

scientific article

Use of reconstituted metabolic networks to assist in metabolomic data visualization and mining

scientific article

Paulina is supported by:

About Paulina

Help