List of works - Roy D. Dar

A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization.

scientific article

A transient heritable memory regulates HIV reactivation from latency

scientific article published on 23 April 2021

Altering Stochastic Noise in Gene Expression for HIV Therapy

scientific article published in January 2014

An Endogenous Accelerator for Viral Gene Expression Confers a Fitness Advantage

scientific article published in February 2013

An endogenous accelerator for viral gene expression confers a fitness advantage.

scientific article published on December 2012

BET bromodomain-targeting compounds reactivate HIV from latency via a Tat-independent mechanism.

scientific article published on February 2012

Calibration of a stochastic model of gene expression including feedback and extrinsic noise sources

scientific article published in 2006

Cell Size-Based Decision-Making of a Viral Gene Circuit

scientific article published on 01 December 2018

Cell size dependent migration of T-cells latently infected with HIV

scientific article published on 01 March 2020

Dynamics of protein noise can distinguish between alternate sources of gene-expression variability

scientific article

Fine-tuning of noise in gene expression with nucleosome remodeling

scientific article published on 07 May 2018

Frequency domain analysis of noise in simple gene circuits.

scientific article published on June 2006

Gene network shaping of inherent noise spectra

scientific article published in 2006

Internetwork connectivity of molecular networks across species of life

scientific article published on 13 January 2021

Internetwork connectivity of molecular networks across species of life

scientific article published on 3 August 2020

Limits on inferring gene regulatory networks from single-cell measurements of unstable mRNA levels

scientific article published on 6 December 2022

Model for biological communication in a nanofabricated cell-mimic driven by stochastic resonance.

scientific article

Monitoring reactivation of latent HIV by label-free gradient light interference microscopy

scientific article published on 20 August 2021

Monocyte to macrophage differentiation and changes in cellular redox homeostasis promote cell type-specific HIV latency reactivation

scientific article published on 29 April 2024

Monocyte to macrophage differentiation and changes in cellular redox homeostasis promote cell type-specific HIV latency reactivation

preprint article published on 12 February 2024

Noise in biological circuits.

scientific article published on March 2009

Perspective: Engineering noise in biological systems towards predictive stochastic design

scientific article published on 07 May 2018

Perspective: The promise of multi-cellular engineered living systems

scientific article published on 11 October 2018

Predicting Treatment of Bioprosthetic Aortic Valve Failure in the United States: A Proposed Model

scientific article published in July 2024

Principles for the design of multicellular engineered living systems

scientific article published in March 2022

Relative stability of mRNA and protein severely limits inference of gene networks from single-cell mRNA measurements

scientific article published in April 2022

Screening for gene expression fluctuations reveals latency-promoting agents of HIV

scientific article published on 16 March 2021

Screening for noise in gene expression identifies drug synergies

scientific article

Similarity in viral and host promoters couples viral reactivation with host cell migration

scientific article

Synergistic Chromatin-Modifying Treatments Reactivate Latent HIV and Decrease Migration of Multiple Host-Cell Types

scientific article

The Low Noise Limit in Gene Expression

scientific article published on 21 October 2015

Topological Constraints on Noise Propagation in Gene Regulatory Networks

scientific article published on 13 October 2021

Transcriptional Bursting Explains the Noise-Versus-Mean Relationship in mRNA and Protein Levels.

scientific article

Transcriptional burst frequency and burst size are equally modulated across the human genome

scientific article published on 11 October 2012

Transcriptional bursting explains the noise-versus-mean relationship in mRNA and protein levels

article published in 2016

Transient-mediated fate determination in a transcriptional circuit of HIV.

scientific article published on 16 March 2008

Using noise to probe and characterize gene circuits.

scholarly article

“A transient heritable memory regulates HIV reactivation from latency”

preprint article published on 2 July 2020

List of works by Roy D. Dar

A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization.

A transient heritable memory regulates HIV reactivation from latency

Altering Stochastic Noise in Gene Expression for HIV Therapy

An Endogenous Accelerator for Viral Gene Expression Confers a Fitness Advantage

An endogenous accelerator for viral gene expression confers a fitness advantage.

BET bromodomain-targeting compounds reactivate HIV from latency via a Tat-independent mechanism.

Calibration of a stochastic model of gene expression including feedback and extrinsic noise sources

Cell Size-Based Decision-Making of a Viral Gene Circuit

Cell size dependent migration of T-cells latently infected with HIV

Dynamics of protein noise can distinguish between alternate sources of gene-expression variability

Fine-tuning of noise in gene expression with nucleosome remodeling

Frequency domain analysis of noise in simple gene circuits.

Gene network shaping of inherent noise spectra

Internetwork connectivity of molecular networks across species of life

Internetwork connectivity of molecular networks across species of life

Limits on inferring gene regulatory networks from single-cell measurements of unstable mRNA levels

Model for biological communication in a nanofabricated cell-mimic driven by stochastic resonance.

Monitoring reactivation of latent HIV by label-free gradient light interference microscopy

Monitoring reactivation of latent HIV by label-free gradient light interference microscopy

Monocyte to macrophage differentiation and changes in cellular redox homeostasis promote cell type-specific HIV latency reactivation

Monocyte to macrophage differentiation and changes in cellular redox homeostasis promote cell type-specific HIV latency reactivation

Noise in biological circuits.

Perspective: Engineering noise in biological systems towards predictive stochastic design

Perspective: The promise of multi-cellular engineered living systems

Predicting Treatment of Bioprosthetic Aortic Valve Failure in the United States: A Proposed Model

Principles for the design of multicellular engineered living systems

Relative stability of mRNA and protein severely limits inference of gene networks from single-cell mRNA measurements

Screening for gene expression fluctuations reveals latency-promoting agents of HIV

Screening for noise in gene expression identifies drug synergies

Similarity in viral and host promoters couples viral reactivation with host cell migration

Synergistic Chromatin-Modifying Treatments Reactivate Latent HIV and Decrease Migration of Multiple Host-Cell Types

The Low Noise Limit in Gene Expression

Topological Constraints on Noise Propagation in Gene Regulatory Networks

Transcriptional Bursting Explains the Noise-Versus-Mean Relationship in mRNA and Protein Levels.

Transcriptional burst frequency and burst size are equally modulated across the human genome

Transcriptional bursting explains the noise-versus-mean relationship in mRNA and protein levels

Transient-mediated fate determination in a transcriptional circuit of HIV.

Using noise to probe and characterize gene circuits.

“A transient heritable memory regulates HIV reactivation from latency”