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List of works by Masayuki Endo

A DNA-based molecular motor that can navigate a network of tracks

scientific article published on 22 January 2012

A Photocaged DNA Nanocapsule for Controlled Unlocking and Opening inside the Cell

scientific article published on 05 March 2019

A Photoregulated DNA-Based Rotary System and Direct Observation of Its Rotational Movement.

scientific article published on 15 February 2017

A light-driven three-dimensional plasmonic nanosystem that translates molecular motion into reversible chiroptical function

scientific article published on 2 February 2016

A lock-and-key mechanism for the controllable fabrication of DNA origami structures

scientific article published on 25 June 2014

A photocaged DNA nanocapsule for delivery and manipulation in cells

scientific article published on 15 June 2020

A versatile DNA nanochip for direct analysis of DNA base-excision repair

scientific article published on 01 December 2010

AFM analysis of changes in nucleosome wrapping induced by DNA epigenetic modification

scientific article published on 30 June 2014

AFM-based single-molecule observation of the conformational changes of DNA structures

scientific article published on 09 April 2019

Advances in DNA Origami-Cell Interfaces

scientific article published on 06 November 2019

Benzophenones in the higher triplet excited states

scientific article published in November 2003

Catalytic RNA nano-objects formed by self-assembly of group I ribozyme dimers serving as unit structures

scientific article published on 22 May 2020

Chemical approaches to DNA nanotechnology

scientific article

Complexing DNA origami frameworks through sequential self-assembly based on directed docking.

scientific article published on 12 April 2018

Confined space facilitates G-quadruplex formation

scientific article published on 27 March 2017

Construction of integrated gene logic-chip

scientific article published on 23 July 2018

Control of A Double Helix DNA Assembly by Use of Cross-Linked Oligonucleotides ⬇️

scientific article published on November 12, 2003

Control of the two-dimensional crystallization of DNA origami with various loop arrangements.

scientific article published in January 2013

Controlling the stoichiometry and strand polarity of a tetramolecular G-quadruplex structure by using a DNA origami frame.

scientific article

Corrigendum: Efficient amplification of self-gelling polypod-like structured DNA by rolling circle amplification and enzymatic digestion.

scientific article published on 7 January 2016

DNA Origami Nanomachines

scientific article published on 18 July 2018

DNA Origami Nanoplate-Based Emulsion with Nanopore Function

scientific article published on 13 September 2019

DNA Origami Scaffolds as Templates for Functional Tetrameric Kir3 K+ Channels.

scientific article published on 16 January 2018

DNA Origami: Synthesis and Self-Assembly

scientific article published on 01 March 2012

DNA density-dependent uptake of DNA origami-based two-or three-dimensional nanostructures by immune cells

scientific article published on 07 July 2020

DNA nanostructures as a tool for targeted antimicrobial delivery

scientific article published on 16 April 2020

DNA nanotechnology: Measuring chloride in live cells

scientific article published on 01 July 2015

DNA origami based visualization system for studying site-specific recombination events.

scientific article

DNA origami technology for biomaterials applications

scientific article published on 07 December 2012

DNA prism structures constructed by folding of multiple rectangular arms

scientific article published on 01 November 2009

Decreased water activity in nanoconfinement contributes to the folding of G-quadruplex and i-motif structures.

scientific article published on 4 September 2018

Design and development of nanosized DNA assemblies in polypod-like structures as efficient vehicles for immunostimulatory CpG motifs to immune cells.

scientific article

Design and synthesis of photochemically controllable caspase-3.

scientific article published in October 2004

Detection of the local structural changes in the dimer interface of BamHI initiated by DNA binding and dissociation using a solvatochromic fluorophore

scientific article published on 01 October 2006

Diastereochemically controlled porphyrin dimer formation on a DNA duplex scaffold

scientific article published on 10 January 2008

Dihydrophenanthrene-type intermediates during photoreaction of trans-4'-benzyl-5-styrylfuran.

scientific article

Direct AFM observation of an opening event of a DNA cuboid constructed via a prism structure

scientific article published on 22 February 2011

Direct Observation and Analysis of the Dynamics of the Photoresponsive Transcription Factor GAL4

scientific article published on 30 April 2019

Direct Observation of Dynamic Movement of DNA Molecules in DNA Origami Imaged Using High-Speed AFM

scientific article published on 01 January 2018

Direct Observation of the Double-Stranded DNA Formation through Metal Ion-Mediated Base Pairing in the Nanoscale Structure

scientific article published on 20 December 2018

Direct Observation of the Formation and Dissociation of Double-Stranded DNA Containing G-Quadruplex/i-Motif Sequences in the DNA Origami Frame Using High-Speed AFM

scientific article published on 01 January 2019

Direct Single-Molecule Observation of Mode and Geometry of RecA-Mediated Homology Search. ⬇️

scientific article published on 4 December 2017

Direct Visualization of Walking Motions of Photocontrolled Nanomachine on the DNA Nanostructure

scientific article

Direct analysis of Holliday junction resolving enzyme in a DNA origami nanostructure

scientific article published on 3 May 2014

Direct and Real-Time Observation of Rotary Movement of a DNA Nanomechanical Device

scientific article published on 11 January 2013

Direct and single-molecule visualization of the solution-state structures of G-hairpin and G-triplex intermediates

scientific article published on 12 March 2014

Direct observation and analysis of TET-mediated oxidation processes in a DNA origami nanochip

scientific article published on 14 March 2020

Direct observation of dynamic interactions between orientation-controlled nucleosomes in a DNA origami frame

scientific article published on 23 August 2020

Direct observation of stepwise movement of a synthetic molecular transporter

scientific article published on 6 February 2011

Direct observation of the dual-switching behaviors corresponding to the state transition in a DNA nanoframe

scientific article published on 01 April 2014

Direct visualization of the movement of a single T7 RNA polymerase and transcription on a DNA nanostructure

scientific article published on 29 July 2012

Duplex DNA is Weakened in Nanoconfinement

scientific article published on 08 May 2020

Dynamic assembly/disassembly processes of photoresponsive DNA origami nanostructures directly visualized on a lipid membrane surface

scientific article published on 24 January 2014

Effects of Physical Damage in the Intermediate Phase on the Progression of Amyloid β Fibrillization

scientific article published on 25 October 2019

Efficient amplification of self-gelling polypod-like structured DNA by rolling circle amplification and enzymatic digestion

scientific article published on 14 October 2015

Engineering RNA-protein complexes with different shapes for imaging and therapeutic applications

scientific article

Examining cooperative binding of Sox2 on DC5 regulatory element upon complex formation with Pax6 through excess electron transfer assay

scientific article published on 26 May 2016

Folding RNA-Protein Complex into Designed Nanostructures

scientific article published on 01 January 2015

Folding of single-stranded circular DNA into rigid rectangular DNA accelerates its cellular uptake

scientific article published on 04 December 2019

Four-way-branched DNA-porphyrin conjugates for construction of four double-helix-DNA assembled structures

scientific article published on 01 September 2005

G-quadruplex-binding ligand-induced DNA synapsis inside a DNA origami frame

scholarly article in RSC Advances, vol. 4 no. 12, 2014

HIV-1 nucleocapsid proteins as molecular chaperones for tetramolecular antiparallel G-quadruplex formation

scientific article

Helical DNA origami tubular structures with various sizes and arrangements

scientific article published on 30 May 2014

High-Resolution Imaging of a Single Gliding Protofilament of Tubulins by HS-AFM.

scientific article published on 21 July 2017

Holliday junction resolvases mediate chloroplast nucleoid segregation

scientific article published in May 2017

Homolytic cleavage of C–Si bond of p-trimethylsilylmethylacetophenone upon stepwise two-photon excitation using two-color two-laser flash photolysis

scientific article published in May 2005

Inhibition of the formation and decay of stilbene core radical cations by the dendron during the photoinduced electron transfer

scientific article published on 01 January 2005

Linking two DNA duplexes with a rigid linker for DNA nanotechnology.

scientific article published on 30 June 2015

Lipid-bilayer-assisted two-dimensional self-assembly of DNA origami nanostructures.

scientific article

Masayuki Endo

scientific article published on 8 October 2014

Mechanical properties of DNA origami nanoassemblies are determined by Holliday junction mechanophores

scientific article

Micro-homology intermediates: RecA's transient sampling revealed at the single molecule level

Mimicking membrane-related biological events by DNA origami nanotechnology

scientific article published on 16 April 2015

Monitoring of three distinct structures of restriction enzyme complexes using characteristic fluorescence from site-selectively incorporated solvatochromic probe

scientific article published on 28 June 2007

Nucleosomes and epigenetics from a chemical perspective

scientific article published on 30 August 2020

Oligomerization of a modular ribozyme assembly of which is controlled by a programmable RNA-RNA interface between two structural modules

scientific article published on 17 May 2019

Optimal Arrangement of Four Short DNA Strands for Delivery of Immunostimulatory Nucleic Acids to Immune Cells.

scientific article published on 29 July 2015

Parallel, double-helix DNA nanostructures using interstrand cross-linked oligonucleotides with bismaleimide linkers

scientific article published on 01 December 2003

Photo-controllable DNA origami nanostructures assembling into predesigned multiorientational patterns.

scientific article published on 14 December 2012

Photo-cross-linking-assisted thermal stability of DNA origami structures and its application for higher-temperature self-assembly.

scientific article published on 29 August 2011

Photochemical regulation of the activity of an endonuclease BamHI using an azobenzene moiety incorporated site-selectively into the dimer interface.

scientific article published on 20 September 2004

Photocontrolled DNA origami assembly using two photoswitches

scientific article published on 15 October 2020

Photoresponsive DNA nanocapsule having an open/close system for capture and release of nanomaterials

scientific article published on 15 September 2014

Preparation of chemically modified RNA origami nanostructures.

scientific article published on 14 October 2014

Programmable DNA translation system using cross-linked DNA mediators

scientific article published on 24 May 2005

Programmable formation of catalytic RNA triangles and squares by assembling modular RNA enzymes.

scientific article published on 17 January 2017

Programmed Two-Dimensional Self-Assembly of Multiple DNA Origami Jigsaw Pieces

scientific article published on 28 December 2010

Programmed placement of gold nanoparticles onto a slit-type DNA origami scaffold

scientific article published on 24 August 2011

Programmed-Assembly System Using DNA Jigsaw Pieces

Programmed-assembly system using DNA jigsaw pieces

scientific article published on 01 May 2010

Programming Rotary Motions with a Hexagonal DNA Nanomachine

scientific article published on 21 March 2019

Protein-driven RNA nanostructured devices that function in vitro and control mammalian cell fate

scientific article published on 14 September 2017

Pyrene-stacked nanostructures constructed in the recombinant tobacco mosaic virus rod scaffold.

scientific article published in May 2006

RNA-templated DNA origami structures.

scientific article published in April 2013

Rate Constant of Bimolecular Triplet Energy Transfer from Chrysene in the Higher Triplet Excited States

scientific article published in September 2004

Recent progress in DNA origami technology.

scientific article published on June 2011

Regulation of B-Z conformational transition and complex formation with a Z-form binding protein by introduction of constraint to double-stranded DNA by using a DNA nanoscaffold.

scientific article

Regulation of DNA methylation using different tensions of double strands constructed in a defined DNA nanostructure

scientific article

Self-assembling DNA dendrimer for effective delivery of immunostimulatory CpG DNA to immune cells.

scientific article

Self-assembling DNA hydrogel-based delivery of immunoinhibitory nucleic acids to immune cells

scientific article published on 10 September 2015

Sequence-selective single-molecule alkylation with a pyrrole-imidazole polyamide visualized in a DNA nanoscaffold

scientific article published on 29 February 2012

Single molecule visualization and characterization of Sox2-Pax6 complex formation on a regulatory DNA element using a DNA origami frame

scientific article published on 04 April 2014

Single-Molecule Manipulation of the Duplex Formation and Dissociation at the G-Quadruplex/i-Motif Site in the DNA Nanostructure.

scientific article published on 24 September 2015

Single-Molecule Observation of the Photoregulated Conformational Dynamics of DNA Origami Nanoscissors

scientific article published on 17 October 2017

Single-Molecule Visualization of the Activity of a Zn(2+)-Dependent DNAzyme.

scientific article published on 17 July 2015

Single-molecule analysis using DNA origami.

scientific article

Single-molecule imaging of dynamic motions of biomolecules in DNA origami nanostructures using high-speed atomic force microscopy.

scientific article published on 6 March 2014

Single-molecule mechanochemical sensing using DNA origami nanostructures.

scientific article published on 16 June 2014

Single-molecule observations of RNA-RNA kissing interactions in a DNA nanostructure

scientific article published on 06 October 2015

Single-molecule visualization of the hybridization and dissociation of photoresponsive oligonucleotides and their reversible switching behavior in a DNA nanostructure

scientific article published on 10 September 2012

Site-specific fluorescent labeling of RNA molecules by specific transcription using unnatural base pairs

scientific article

Site-specific incorporation of a photo-crosslinking component into RNA by T7 transcription mediated by unnatural base pairs

scientific article published in January 2004

Small molecule binding to a G-hairpin and a G-triplex: a new insight into anticancer drug design targeting G-rich regions

scientific article published on 01 June 2015

State-of-the-art high-speed atomic force microscopy for investigation of single-molecular dynamics of proteins

scientific article

Stepwise photocleavage of C-O bonds of bis(substituted-methyl)naphthalenes with stepwise excitation by two-color two-laser and three-color three-laser irradiations.

scientific article published in May 2005

Structural and Functional Analysis of Proteins by High-Speed Atomic Force Microscopy ⬇️

scientific article published on January 1, 2012

Structural arrangement of DNA constrained by a cross-linker

scientific article published on 02 September 2005

Structural arrangement of two DNA double helices using cross-linked oligonucleotide connectors

scientific article published on 07 May 2004

Studying RNAP-promoter interactions using atomic force microscopy.

scientific article published on 22 May 2015

Thermodynamic properties of branched DNA complexes with full-matched and mismatched DNA strands

scientific article published on 19 April 2006

Three-dimensional DNA nanostructures constructed by folding of multiple rectangles

scientific article published on 01 January 2009

Torsional Constraints of DNA Substrates Impact Cas9 Cleavage

scientific article published on 6 October 2016

Transcription regulation system mediated by mechanical operation of a DNA nanostructure

scientific article published on 31 January 2012

Transient Phenomena of Polyphenyls in the Higher Triplet Excited State

scientific article published in October 2004

Translation-dependent unwinding of stem-loops by UPF1 licenses Regnase-1 to degrade inflammatory mRNAs

scientific article published on 01 September 2019

Triggering nucleic acid nanostructure assembly by conditional kissing interactions.

scientific article published on 20 December 2017

Triple Helix Formation in a Topologically Controlled DNA Nanosystem.

scientific article

Two-dimensional DNA origami assemblies using a four-way connector

scientific article published on 01 February 2011

Unnatural base pairs mediate the site-specific incorporation of an unnatural hydrophobic component into RNA transcripts

scientific article published in May 2004

Visualization of dynamic conformational switching of the G-quadruplex in a DNA nanostructure.

scientific article published on 28 October 2010

X-ray crystal structure of a cyclic-PIP-DNA complex in the reverse-binding orientation

scientific article published on 13 May 2020

Zinc-finger proteins for site-specific protein positioning on DNA-origami structures

scientific article published on 27 January 2012

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