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List of works by Rob B Russell

3did: interacting protein domains of known three-dimensional structure

scientific article

A careful disorderliness in the proteome: sites for interaction and targets for future therapies.

scientific article published on 20 February 2008

A complex prediction: three-dimensional model of the yeast exosome.

scientific article published on July 2002

A lipid-binding domain in Wnt: a case of mistaken identity?

scientific article published on 01 October 1999

A model for statistical significance of local similarities in structure.

scientific article

A more complete, complexed and structured interactome.

scientific article published on 15 June 2007

A novel binding site in catalase is suggested by structural similarity to the calycin superfamily.

scientific article published in February 1996

A shortcut to peptides to modulate platelets

scientific article published on 01 February 2007

A systems biology approach towards the prediction of ciliopathy mechanisms.

scientific article published on 13 July 2015

Accurate prediction of peptide binding sites on protein surfaces.

scientific article

Adeno-associated virus is associated with a lower risk of high-grade cervical neoplasia.

scientific article published in April 2001

An SH2-SH3 domain hybrid.

scientific article

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies.

scientific article

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms

scientific journal article

Analysis and prediction of functional sub-types from protein sequence alignments.

scientific article published in October 2000

Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution

scientific article (publication date: 16 December 2005)

Cancer genetics meets biomolecular mechanism-bridging an age-old gulf.

scientific article published on 24 January 2018

Capturing protein communities by structural proteomics in a thermophilic eukaryote.

scientific article published on 25 July 2017

Characterizing protein interactions employing a genome-wide siRNA cellular phenotyping screen

scientific article

CiliaCarta: An integrated and validated compendium of ciliary genes

scientific article published on 16 May 2019

Classification of protein folds

scientific article published on 01 July 2007

Classification of protein folds

scientific article published on 01 January 2000

Classification of protein folds.

scientific article

Combining specificity determining and conserved residues improves functional site prediction

scientific article

Computational identification of novel amino-acid interactions in HIV Gag via correlated evolution.

scientific article

Consequences of intramolecular ionic interactions for the activation rate of human pepsinogens A and C as revealed by molecular modelling

scientific article published on 01 January 1991

Conservation analysis and structure prediction of the SH2 family of phosphotyrosine binding domains

scientific article (publication date: 8 June 1992)

Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium.

scientific article published on 28 February 2012

Cryptogenic cholestasis in young and adults: ATP8B1, ABCB11, ABCB4, and TJP2 gene variants analysis by high-throughput sequencing.

scientific article

DILIMOT: discovery of linear motifs in proteins

scientific article

Defective homologous recombination DNA repair as therapeutic target in advanced chordoma

scientific article published on 09 April 2019

Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution.

scientific article

Differential localization of coatomer complex isoforms within the Golgi apparatus.

scholarly article

Domain recombination: a workhorse for evolutionary innovation.

scientific article

EPEN-04. CXorf67 MIMICS ONCOGENIC HISTONE H3 K27M MUTATIONS AND FUNCTIONS AS INTRINSIC INHIBITOR OF PRC2 FUNCTION IN AGGRESSIVE POSTERIOR FOSSA EPENDYMOMA

scientific article published on 23 April 2019

EZHIP/CXorf67 mimics K27M mutated oncohistones and functions as an intrinsic inhibitor of PRC2 function in aggressive posterior fossa ependymoma

scientific article published on 01 July 2019

Evolutionary relationship between the bacterial HPr kinase and the ubiquitous PEP-carboxykinase: expanding the P-loop nucleotidyl transferase superfamily

article

Fast fitting of atomic structures to low-resolution electron density maps by surface overlap maximization.

scientific article published in May 2004

Finding functional sites in structural genomics proteins.

scientific article

Fold recognition from sequence comparisons.

scientific article published on January 2001

Fold recognition using sequence and secondary structure information.

scientific article published in January 1999

Functional analysis of H-Ryk, an atypical member of the receptor tyrosine kinase family

scientific article

GABA(B2) is essential for g-protein coupling of the GABA(B) receptor heterodimer

scientific article published on 01 October 2001

Geminate structures of African cassava mosaic virus.

scientific article

Genes encoding members of the JAK-STAT pathway or epigenetic regulators are recurrently mutated in T-cell prolymphocytic leukaemia.

scientific article

Genetic variants affecting equivalent protein family positions reflect human diversity.

scientific article published on 6 October 2017

Genomic and transcriptomic changes complement each other in the pathogenesis of sporadic Burkitt lymphoma

scientific article published on 29 March 2019

Getting the most from your protein sequence

article

Harry Potter and the structural biologist's (Key)stone.

scientific article published on January 2006

Hb M Dothan [beta 25/26 (B7/B8)/(GGT/GAG-->GAG//Gly/Glu-->Glu]; a new mechanism of unstable methemoglobin variant and molecular characteristics.

scientific article published on 15 September 2009

Identification of Drosophila MicroRNA targets

scientific article

Identification of distant homologues of fibroblast growth factors suggests a common ancestor for all β-trefoil proteins 1 1Edited by J. Thornton

article

Illuminating G-Protein-Coupling Selectivity of GPCRs

scientific article published on 31 May 2019

Impact of genome reduction on bacterial metabolism and its regulation.

scientific article published in November 2009

InterPreTS: protein interaction prediction through tertiary structure.

scientific article

Interactions between the Fyn SH3-domain and adaptor protein Cbp/PAG derived ligands, effects on kinase activity and affinity.

scientific article

Interrogating protein interaction networks through structural biology

scientific article

KIAA0556 is a novel ciliary basal body component mutated in Joubert syndrome

scientific article

Landscape of nuclear transport receptor cargo specificity

scientific article published on 18 December 2017

Linear motifs: evolutionary interaction switches.

scientific article

Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactions.

scientific article

Mechnetor: a web server for exploring protein mechanism and the functional context of genetic variants

scientific article published on 01 July 2021

Misleading local sequence alignments: implications for comparative protein modelling ⬇️

scientific article published on August 1, 1998

Molecular biology of human renin and its gene.

scientific article published on January 1991

Molecular dissection of human Argonaute proteins by DNA shuffling.

scientific article

Molecular switch from MYC to MYCN expression in MYC protein negative Burkitt lymphoma cases

scientific article published on 20 November 2019

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

scientific article (publication date: October 1992)

Mutagenesis of N-terminal residues of feline foamy virus Gag reveals entirely distinct functions during capsid formation, particle assembly, Gag processing and budding

scientific article published on 22 August 2016

Negative protein-protein interaction datasets derived from large-scale two-hybrid experiments.

scientific article published on 4 August 2012

New roles for structure in biology and drug discovery

article

On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

scientific article

PRECOG: PREdicting COupling probabilities of G-protein coupled receptors

scientific article published on 01 July 2019

Peptide-mediated interactions in biological systems: new discoveries and applications

article

Potential artefacts in protein-interaction networks

article

Predicting function from structure: examples of the serine protease inhibitor canonical loop conformation found in extracellular proteins.

scientific article

Predictions without templates: New folds, secondary structure, and contacts in CASP5 ⬇️

scientific article published on January 1, 2003

Principles of microRNA-target recognition

scientific article

Proceedings of the Frontiers of Retrovirology Conference 2016.

scientific article published on 26 September 2016

Proline-Rich Regions in Transcriptional Complexes: Heading in Many Directions

scientific article published on 16 January 2007

ProtChemSI: a network of protein-chemical structural interactions

scientific article

Protein fold irregularities that hinder sequence analysis.

scientific article published in June 1998

Protein fold recognition by mapping predicted secondary structures.

scientific article

Protein structure prediction

scientific article published in Nature

Rare, functional, somatic variants in gene families linked to cancer genes: GPCR signaling as a paradigm

scientific article published on 23 July 2019

Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation 1 1Edited by F. E. Cohen

article

Recurrent mutation of JAK3 in T-cell prolymphocytic leukemia

scientific article published on 21 January 2014

RecurrentRHOAmutations in pediatric Burkitt lymphoma treated according to the NHL-BFM protocols

article

SMARCA4-mutated atypical teratoid/rhabdoid tumors are associated with inherited germline alterations and poor prognosis

article

SYSCILIA, “A systems biology approach to dissect cilia function and its disruption in human genetic disease”.

scientific article published on 16 November 2012

Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility.

scientific article

Structural similarity to link sequence space: new potential superfamilies and implications for structural genomics.

scientific article

Structural systems biology: modelling protein interactions.

scientific article

Structure prediction. How good are we?

scientific article

Structure-based systems biology: a zoom lens for the cell.

scientific article

Studying how genetic variants affect mechanism in biological systems

scientific article published on 26 October 2018

Subunit architecture of intact protein complexes from mass spectrometry and homology modeling.

scientific article

Swaposins: circular permutations within genes encoding saposin homologues

scientific article published in May 1995

Systematic discovery of new recognition peptides mediating protein interaction networks

scientific article

Systematic exploration of the ciliary protein landscape by large-scale affinity proteomics.

scientific article published on 13 July 2015

Systematic identification of phosphorylation-mediated protein interaction switches

scientific article

Taking the mystery out of biological networks.

scientific article

Targeting and tinkering with interaction networks

scientific article

Ten thousand interactions for the molecular biologist

article

The C-terminal domains of the GABA(b) receptor subunits mediate intracellular trafficking but are not required for receptor signaling.

scientific article

The Relationship Between Sequence and Interaction Divergence in Proteins ⬇️

scientific article published on October 3, 2003

The limits of protein secondary structure prediction accuracy from multiple sequence alignment.

scientific article

The mutational landscape of Burkitt-like lymphoma with 11q aberration is distinct from that of Burkitt lymphoma

article

The mutational pattern of primary lymphoma of the central nervous system determined by whole-exome sequencing.

scientific article published on 5 September 2014

The third dimension for protein interactions and complexes.

scientific article

Towards an intelligent system for the automatic assignment of domains in globular proteins

scientific article published on 01 January 1995

Understanding the role of genetic variability in LRRK2 in Indian population

scientific article published on 28 November 2018

WD40 proteins propel cellular networks.

scientific article

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