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List of works by Cheng Chang

A Deep Learning-Based Tumor Classifier Directly Using MS Raw Data

scientific article published on 08 July 2020

A fast workflow for identification and quantification of proteomes.

scientific article published on 13 May 2013

A new insight into the impact of different proteases on SILAC quantitative proteome of the mouse liver.

scientific article published on 20 June 2013

AP3: An Advanced Proteotypic Peptide Predictor for Targeted Proteomics by Incorporating Peptide Digestibility

scientific article published on 20 June 2019

Atg9-centered multi-omics integration reveals new autophagy regulators in <i>Saccharomyces cerevisiae</i>

scientific article published on 15 March 2021

Cellular differentiation into hyphae and spores in halophilic archaea

scientific article published in 2023

Chromosome-8-coded proteome of Chinese Chromosome Proteome Data set (CCPD) 2.0 with partial immunohistochemical verifications

scientific article

Comprehensive Proteomics Analysis Reveals Metabolic Reprogramming of Tumor-Associated Macrophages Stimulated by the Tumor Microenvironment

scientific article published on 3 November 2016

ExpressVis: a biologist-oriented interactive web server for exploring multi-omics data

scientific article published on 06 May 2022

First proteomic exploration of protein-encoding genes on chromosome 1 in human liver, stomach, and colon.

scientific article published on 20 December 2012

Human fallopian tube proteome shows high coverage of mesenchymal stem cells associated proteins.

scientific article published on 12 January 2016

In-depth method assessments of differentially expressed protein detection for shotgun proteomics data with missing values

scientific article

In-depth serum proteomics reveals biomarkers of psoriasis severity and response to traditional Chinese medicine

article

Inflammasome-Derived Exosomes Activate NF-κB Signaling in Macrophages.

scientific article published on 29 September 2016

KeggExp: a web server for visual integration of KEGG pathways and expression profile data

scientific article published on 01 April 2019

LFAQ: Toward Unbiased Label-Free Absolute Protein Quantification by Predicting Peptide Quantitative Factors

scientific article published on 21 December 2018

LiverWiki: a wiki-based database for human liver

scientific article published on 13 October 2017

Mining the human plasma proteome with three-dimensional strategies by high-resolution Quadrupole Orbitrap Mass Spectrometry

scientific article published on 25 November 2015

N-linked glycoproteome profiling of human serum using tandem enrichment and multiple fraction concatenation.

scientific article published on 26 July 2013

Omics evidence: single nucleotide variants transmissions on chromosome 20 in liver cancer cell lines.

scientific article published on 5 December 2013

PANDA-view: an easy-to-use tool for statistical analysis and visualization of quantitative proteomics data

scholarly article by Cheng Chang published in October 2018

PANDA: A comprehensive and flexible tool for quantitative proteomics data analysis

scientific article published on 01 March 2019

PPICurator: A Tool for Extracting Comprehensive Protein-Protein Interaction Information

scientific article published on 07 January 2019

PPIExp: A Web-Based Platform for Integration and Visualization of Protein-Protein Interaction Data and Spatiotemporal Proteomics Data

scientific article published on 26 December 2018

PepDistiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics

scientific article published in June 2012

Proteome atlas of human chromosome 8 and its multiple 8p deficiencies in tumorigenesis of the stomach, colon, and liver

scientific article published on 20 December 2012

Proteomic Delineation of the ArcA Regulon in Salmonella Typhimurium During Anaerobiosis

scientific article published on 23 July 2018

Proteomic Profiling during Infection Distinguishes the Intracellular Environment of Host Cells

scientific article published on 01 March 2019

Qualitative and quantitative expression status of the human chromosome 20 genes in cancer tissues and the representative cell lines.

scientific article published on 19 December 2012

Quantitative and In-Depth Survey of the Isotopic Abundance Distribution Errors in Shotgun Proteomics

scientific article

SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods

scientific article

StLiter: A Novel Algorithm to Iteratively Build the Compacted de Bruijn Graph From Many Complete Genomes

scientific article published in 2022

Systematic analysis of missing proteins provides clues to help define all of the protein-coding genes on human chromosome 1.

scientific article

Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process

scientific article

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