List of works - Robert L. Mach

A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.

scientific article published on 25 May 2017

A highly sensitive in vivo footprinting technique for condition-dependent identification of cis elements

scientific article published on 3 October 2013

A long noncoding RNA promotes cellulase expression in Trichoderma reesei.

scientific article published on 23 March 2018

A loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Enterococcus spp. in water

scientific article published on 13 May 2017

A modified expression of the major hydrolase activator in Hypocrea jecorina (Trichoderma reesei) changes enzymatic catalysis of biopolymer degradation

scientific article published on June 2011

A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

scientific article

A reference-gene-based quantitative PCR method as a tool to determine Fusarium resistance in wheat

scientific article published on 9 September 2009

A sensitive and robust method for automated on-line monitoring of enzymatic activities in water and water resources

scientific article

A truncated form of the Carbon catabolite repressor 1 increases cellulase production in Trichoderma reesei

scientific article published on 11 September 2014

Application of single-strand conformation polymorphism and denaturing gradient gel electrophoresis for fla sequence typing of Campylobacter jejuni

scientific article published on 01 March 2003

Automated Sampling Procedures Supported by High Persistence of Bacterial Fecal Indicators and Bacteroidetes Genetic Microbial Source Tracking Markers in Municipal Wastewater during Short-Term Storage at 5°C

scientific article published on 22 May 2015

Bacterial diversity along a 2600 km river continuum

scientific article published on 29 April 2015

Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities.

scientific article published in August 2005

Ca2+-calmodulin antagonists interfere with xylanase formation and secretion in Trichoderma reesei ⬇️

scientific article published on July 24, 1998

Carbon catabolite repression of xylanase I (xyn1) gene expression in Trichoderma reesei.

scientific article

Cellulase formation by species of Trichoderma sect. Longibrachiatum and of Hypocrea spp. with anamorphs referable to Trichoderma sect. Longibrachiatum

scientific article published on 01 June 1996

Characterization of a community-acquired-MRSA USA300 isolate from a river sample in Austria and whole genome sequence based comparison to a diverse collection of USA300 isolates.

scientific article published on 21 June 2018

Characterization of erythrose reductases from filamentous fungi ⬇️

scientific article published on August 8, 2013

Characterization of the pyruvate kinase-encoding gene (pki1) of Trichoderma reesei.

scientific article

Chitinase gene expression during mycoparasitic interaction of Trichoderma harzianum with its host

scientific article published on 01 March 1999

Comparative analysis of denaturing gradient gel electrophoresis and temporal temperature gradient gel electrophoresis in separating Escherichia coli uidA amplicons differing in single base substitutions

scientific article published on 01 June 2000

Correction for Derntl et al., "Novel Strategies for Genomic Manipulation of Trichoderma reesei with the Purpose of Strain Engineering". ⬇️

scientific article published on 31 October 2017

Detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach.

scientific article published in June 2014

Detection of the food allergen celery via loop-mediated isothermal amplification technique.

scientific article published in June 2014

Determination of Escherichia coli contamination with chromocult coliform agar showed a high level of discrimination efficiency for differing fecal pollution levels in tropical waters of Kampala, Uganda.

scientific article

Development of a Scorpion probe-based real-time PCR for the sensitive quantification of Bacteroides sp. ribosomal DNA from human and cattle origin and evaluation in spring water matrices.

scientific article published on 30 May 2006

Development of a novel amplified fragment length polymorphism (AFLP) typing method for enterococci isolates from cattle faeces and evaluation of the single versus pooled faecal sampling approach.

scientific article published on 7 July 2006

Different inducibility of expression of the two xylanase genes xyn1 and xyn2 in Trichoderma reesei.

scientific article

Direct extraction of genomic DNA from maize with aqueous ionic liquid buffer systems for applications in genetically modified organisms analysis.

scientific article published on 9 November 2014

Discrimination efficacy of fecal pollution detection in different aquatic habitats of a high-altitude tropical country, using presumptive coliforms, Escherichia coli, and Clostridium perfringens spores.

scientific article published on January 2005

Draft Genome Sequence of a Community-Acquired Methicillin-Resistant Staphylococcus aureus USA300 Isolate from a River Sample.

scientific article published on 19 October 2017

Draft Genome Sequence of the First Documented Clinical Siccibacter turicensis Isolate in Austria.

scientific article published on 3 May 2018

Elevated activity of dolichyl phosphate mannose synthase enhances biocontrol abilities of Trichoderma atroviride

scientific article published on 01 December 2011

Erythritol as sweetener-wherefrom and whereto?

scientific article

Erythritol production on wheat straw using Trichoderma reesei

scientific article published on 29 May 2014

Escherichia coli and enterococci are sensitive and reliable indicators for human, livestock and wildlife faecal pollution in alpine mountainous water resources.

scientific article

Eubacterial 16S-rDNA amplicon profiling: a rapid technique for comparison and differentiation of heterotrophic plate count communities from drinking water.

scientific article published in May 2004

Evaluation of matrix-assisted laser desorption/ionization (MALDI) preparation techniques for surface characterization of intact Fusarium spores by MALDI linear time-of-flight mass spectrometry

scientific article

Expanding the toolbox: another auxotrophic marker for targeted gene integrations in Trichoderma reesei

scientific article published on 14 September 2021

Expression of the ech42 (endochitinase) gene of Trichoderma atroviride under carbon starvation is antagonized via a BrlA-like cis-acting element

scientific article published on 01 January 2003

Family clustering of Baeyer-Villiger monooxygenases based on protein sequence and stereopreference

scientific article published on 01 June 2005

From an electrophoretic mobility shift assay to isolated transcription factors: a fast genomic-proteomic approach

scientific article

FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution

scientific article published on 27 September 2021

Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents

scientific article published on 23 March 2018

Identification of mycoparasitism-related genes in Trichoderma atroviride

scientific article

Identification of the Main Regulator Responsible for Synthesis of the Typical Yellow Pigment Produced by Trichoderma reesei

scientific article

In Vivo Study of the Sorbicillinoid Gene Cluster in Trichoderma reesei.

scientific article published on 20 October 2017

Influence of cis Element Arrangement on Promoter Strength in Trichoderma reesei.

scientific article published on 27 October 2017

Integral strategy for evaluation of fecal indicator performance in bird-influenced saline inland waters.

scientific article published on December 2004

L-arabitol is the actual inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei).

scientific article

Microbiological monitoring and automated event sampling at karst springs using LEO-satellites.

scientific article published on January 2008

Microbiological water quality along the Danube River: integrating data from two whole-river surveys and a transnational monitoring network.

scientific article published on 29 May 2009

Molecular characterization of a cellulase-negative mutant of Hypocrea jecorina

scientific article published on 01 November 2000

Multiparametric monitoring of microbial faecal pollution reveals the dominance of human contamination along the whole Danube River

scientific article published on 22 July 2017

Mutation of the Xylanase regulator 1 causes a glucose blind hydrolase expressing phenotype in industrially used Trichoderma strains ⬇️

scientific article published on May 2, 2013

Novel Strategies for Genomic Manipulation of Trichoderma reesei with the Purpose of Strain Engineering

scientific article published on 6 July 2015

Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution

scientific article

One-Step Triplex High-Resolution Melting Analysis for Rapid Identification and Simultaneous Subtyping of Frequently Isolated Salmonella Serovars ⬇️

scientific article published on February 17, 2012

Performance characteristics of qPCR assays targeting human- and ruminant-associated bacteroidetes for microbial source tracking across sixteen countries on six continents.

scientific article published on 10 July 2013

Phylogenetic relationship of Fusarium langsethiae to Fusarium poae and Fusarium sporotrichioides as inferred by IGS, ITS, beta-tubulin sequences and UP-PCR hybridization analysis.

scientific article

Potential applications of next generation DNA sequencing of 16S rRNA gene amplicons in microbial water quality monitoring.

scientific article published on November 2015

Prokaryotic community analysis with CARD-FISH in comparison with FISH in ultra-oligotrophic ground- and drinking water.

scientific article published on October 2007

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

scientific article published on August 2006

Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics.

scientific article published on 28 June 2008

Regulation of alpha-aminoadipate reductase from Penicillium chrysogenum in relation to the flux from alpha-aminoadipate into penicillin biosynthesis

scientific article published on August 1, 1992

Regulation of gene expression by the action of a fungal lncRNA on a transactivator

scientific article published on 13 September 2019

Regulation of gene expression in industrial fungi: Trichoderma.

scientific article

Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei).

scientific article published on 16 January 2008

Regulatory systems for gene expression control in cyanobacteria

scientific article published on 22 January 2020

Response to letter to the editor regarding "detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach".

scientific article published on 30 October 2014

Role of four major cellulases in triggering of cellulase gene expression by cellulose in Trichoderma reesei ⬇️

scientific article published on September 1, 1997

Sanitary inspection of wells using risk-of-contamination scoring indicates a high predictive ability for bacterial faecal pollution in the peri-urban tropical lowlands of Dar es Salaam, Tanzania

scientific article published on June 2012

Similar is not the same: differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi.

scientific article

Specific detection of Fusarium langsethiae and related species by DGGE and ARMS-PCR of a beta-tubulin (tub1) gene fragment.

scientific article published in September 2004

Susceptibility of Tsetse Species to Glossina pallidipes Salivary Gland Hypertrophy Virus (GpSGHV).

scientific article published on 9 April 2018

Synthesis of an antiviral drug precursor from chitin using a saprophyte as a whole-cell catalyst.

scientific article

The DNA-methyltransferase inhibitor 5-aza-2-deoxycytidine affects Humicola grisea enzyme activities and the glucose-mediated gene repression.

scientific article

The Hypocrea jecorina HAP 2/3/5 protein complex binds to the inverted CCAAT-box (ATTGG) within the cbh2 (cellobiohydrolase II-gene) activating element.

scientific article published on September 2001

The Nag1 N-acetylglucosaminidase of Trichoderma atroviride is essential for chitinase induction by chitin and of major relevance to biocontrol.

scientific article published on 14 May 2003

The Post-genomic Era of Trichoderma reesei: What's Next?

scientific article

The Relation Between Promoter Chromatin Status, Xyr1 and Cellulase Ex-pression in Trichoderma reesei.

scientific article published on April 2016

The Two Major Xylanases from Trichoderma Reesei: Characterization of Both Enzymes and Genes

article

The bgl1 gene of Trichoderma reesei QM 9414 encodes an extracellular, cellulose-inducible beta-glucosidase involved in cellulase induction by sophorose.

scientific article published in May 1995

The impact of chromatin remodelling on cellulase expression in Trichoderma reesei.

scientific article published on 7 August 2015

The spectral absorption coefficient at 254 nm as a real-time early warning proxy for detecting faecal pollution events at alpine karst water resources ⬇️

scientific article published on January 1, 2010

Transcription factor Xpp1 is a switch between primary and secondary fungal metabolism

scientific article (publication date: 24 January 2017)

Transcriptional regulation of xyn1, encoding xylanase I, in Hypocrea jecorina

scientific article published on March 2006

Transformation of Trichoderma reesei based on hygromycin B resistance using homologous expression signals.

scientific article

Transformation system for Hypocrea jecorina (Trichoderma reesei) that favors homologous integration and employs reusable bidirectionally selectable markers.

scientific article published on 12 November 2010

Trichoderma atroviride transcriptional regulator Xyr1 supports the induction of systemic resistance in plants

scientific article published on 20 June 2014

Two adjacent protein binding motifs in the cbh2 (cellobiohydrolase II-encoding) promoter of the fungus Hypocrea jecorina (Trichoderma reesei) cooperate in the induction by cellulose.

scientific article

Xpp1 regulates the expression of xylanases, but not of cellulases in Trichoderma reesei.

scientific article published on 6 August 2015

Xyr1 (xylanase regulator 1) regulates both the hydrolytic enzyme system and D-xylose metabolism in Hypocrea jecorina.

scientific article published on 20 October 2006

Xyr1 receives the lactose induction signal and regulates lactose metabolism in Hypocrea jecorina.

scientific article published on 23 July 2007

Xyr1 regulates xylanase but not cellulase formation in the head blight fungus Fusarium graminearum.

scientific article published on 9 October 2007

List of works by Robert L. Mach

A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.

A highly sensitive in vivo footprinting technique for condition-dependent identification of cis elements

A long noncoding RNA promotes cellulase expression in Trichoderma reesei.

A loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Enterococcus spp. in water

A modified expression of the major hydrolase activator in Hypocrea jecorina (Trichoderma reesei) changes enzymatic catalysis of biopolymer degradation

A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

A reference-gene-based quantitative PCR method as a tool to determine Fusarium resistance in wheat

A sensitive and robust method for automated on-line monitoring of enzymatic activities in water and water resources

A truncated form of the Carbon catabolite repressor 1 increases cellulase production in Trichoderma reesei

Application of single-strand conformation polymorphism and denaturing gradient gel electrophoresis for fla sequence typing of Campylobacter jejuni

Automated Sampling Procedures Supported by High Persistence of Bacterial Fecal Indicators and Bacteroidetes Genetic Microbial Source Tracking Markers in Municipal Wastewater during Short-Term Storage at 5°C

Bacterial diversity along a 2600 km river continuum

Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities.

Ca2+-calmodulin antagonists interfere with xylanase formation and secretion in Trichoderma reesei ⬇️

Carbon catabolite repression of xylanase I (xyn1) gene expression in Trichoderma reesei.

Cellulase formation by species of Trichoderma sect. Longibrachiatum and of Hypocrea spp. with anamorphs referable to Trichoderma sect. Longibrachiatum

Characterization of a community-acquired-MRSA USA300 isolate from a river sample in Austria and whole genome sequence based comparison to a diverse collection of USA300 isolates.

Characterization of erythrose reductases from filamentous fungi ⬇️

Characterization of the pyruvate kinase-encoding gene (pki1) of Trichoderma reesei.

Chitinase gene expression during mycoparasitic interaction of Trichoderma harzianum with its host

Comparative analysis of denaturing gradient gel electrophoresis and temporal temperature gradient gel electrophoresis in separating Escherichia coli uidA amplicons differing in single base substitutions

Correction for Derntl et al., "Novel Strategies for Genomic Manipulation of Trichoderma reesei with the Purpose of Strain Engineering". ⬇️

Detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach.

Detection of the food allergen celery via loop-mediated isothermal amplification technique.

Determination of Escherichia coli contamination with chromocult coliform agar showed a high level of discrimination efficiency for differing fecal pollution levels in tropical waters of Kampala, Uganda.

Development of a Scorpion probe-based real-time PCR for the sensitive quantification of Bacteroides sp. ribosomal DNA from human and cattle origin and evaluation in spring water matrices.

Development of a novel amplified fragment length polymorphism (AFLP) typing method for enterococci isolates from cattle faeces and evaluation of the single versus pooled faecal sampling approach.

Different inducibility of expression of the two xylanase genes xyn1 and xyn2 in Trichoderma reesei.

Direct extraction of genomic DNA from maize with aqueous ionic liquid buffer systems for applications in genetically modified organisms analysis.

Discrimination efficacy of fecal pollution detection in different aquatic habitats of a high-altitude tropical country, using presumptive coliforms, Escherichia coli, and Clostridium perfringens spores.

Draft Genome Sequence of a Community-Acquired Methicillin-Resistant Staphylococcus aureus USA300 Isolate from a River Sample.

Draft Genome Sequence of the First Documented Clinical Siccibacter turicensis Isolate in Austria.

Elevated activity of dolichyl phosphate mannose synthase enhances biocontrol abilities of Trichoderma atroviride

Erythritol as sweetener-wherefrom and whereto?

Erythritol production on wheat straw using Trichoderma reesei

Escherichia coli and enterococci are sensitive and reliable indicators for human, livestock and wildlife faecal pollution in alpine mountainous water resources.

Eubacterial 16S-rDNA amplicon profiling: a rapid technique for comparison and differentiation of heterotrophic plate count communities from drinking water.

Evaluation of matrix-assisted laser desorption/ionization (MALDI) preparation techniques for surface characterization of intact Fusarium spores by MALDI linear time-of-flight mass spectrometry

Expanding the toolbox: another auxotrophic marker for targeted gene integrations in Trichoderma reesei

Expression of the ech42 (endochitinase) gene of Trichoderma atroviride under carbon starvation is antagonized via a BrlA-like cis-acting element

Family clustering of Baeyer-Villiger monooxygenases based on protein sequence and stereopreference

From an electrophoretic mobility shift assay to isolated transcription factors: a fast genomic-proteomic approach

FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution

Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents

Identification of mycoparasitism-related genes in Trichoderma atroviride

Identification of the Main Regulator Responsible for Synthesis of the Typical Yellow Pigment Produced by Trichoderma reesei

In Vivo Study of the Sorbicillinoid Gene Cluster in Trichoderma reesei.

Influence of cis Element Arrangement on Promoter Strength in Trichoderma reesei.

Integral strategy for evaluation of fecal indicator performance in bird-influenced saline inland waters.

L-arabitol is the actual inducer of xylanase expression in Hypocrea jecorina (Trichoderma reesei).

Microbiological monitoring and automated event sampling at karst springs using LEO-satellites.

Microbiological water quality along the Danube River: integrating data from two whole-river surveys and a transnational monitoring network.

Molecular characterization of a cellulase-negative mutant of Hypocrea jecorina

Multiparametric monitoring of microbial faecal pollution reveals the dominance of human contamination along the whole Danube River

Mutation of the Xylanase regulator 1 causes a glucose blind hydrolase expressing phenotype in industrially used Trichoderma strains ⬇️

Novel Strategies for Genomic Manipulation of Trichoderma reesei with the Purpose of Strain Engineering

Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution

One-Step Triplex High-Resolution Melting Analysis for Rapid Identification and Simultaneous Subtyping of Frequently Isolated Salmonella Serovars ⬇️

Performance characteristics of qPCR assays targeting human- and ruminant-associated bacteroidetes for microbial source tracking across sixteen countries on six continents.

Phylogenetic relationship of Fusarium langsethiae to Fusarium poae and Fusarium sporotrichioides as inferred by IGS, ITS, beta-tubulin sequences and UP-PCR hybridization analysis.

Potential applications of next generation DNA sequencing of 16S rRNA gene amplicons in microbial water quality monitoring.

Prokaryotic community analysis with CARD-FISH in comparison with FISH in ultra-oligotrophic ground- and drinking water.

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics.

Regulation of alpha-aminoadipate reductase from Penicillium chrysogenum in relation to the flux from alpha-aminoadipate into penicillin biosynthesis

Regulation of gene expression by the action of a fungal lncRNA on a transactivator

Regulation of gene expression in industrial fungi: Trichoderma.

Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei).

Regulatory systems for gene expression control in cyanobacteria

Response to letter to the editor regarding "detection of the 35S promoter in transgenic maize via various isothermal amplification techniques: a practical approach".

Role of four major cellulases in triggering of cellulase gene expression by cellulose in Trichoderma reesei ⬇️

Sanitary inspection of wells using risk-of-contamination scoring indicates a high predictive ability for bacterial faecal pollution in the peri-urban tropical lowlands of Dar es Salaam, Tanzania

Similar is not the same: differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi.

Specific detection of Fusarium langsethiae and related species by DGGE and ARMS-PCR of a beta-tubulin (tub1) gene fragment.

Susceptibility of Tsetse Species to Glossina pallidipes Salivary Gland Hypertrophy Virus (GpSGHV).

Synthesis of an antiviral drug precursor from chitin using a saprophyte as a whole-cell catalyst.

The DNA-methyltransferase inhibitor 5-aza-2-deoxycytidine affects Humicola grisea enzyme activities and the glucose-mediated gene repression.

The Hypocrea jecorina HAP 2/3/5 protein complex binds to the inverted CCAAT-box (ATTGG) within the cbh2 (cellobiohydrolase II-gene) activating element.

The Nag1 N-acetylglucosaminidase of Trichoderma atroviride is essential for chitinase induction by chitin and of major relevance to biocontrol.