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List of works by George Weinstock

22 The recA Enzyme of Escherichia coli and Recombination Assays

scholarly article by Kevin Mcentee & George Weinstock published 1981 in The Enzymes

28-way vertebrate alignment and conservation track in the UCSC Genome Browser

scientific article (publication date: December 2007)

619. Intestinal Microbiome Changes Associated with Immune Status and Clostridium difficile Colonization in Hospitalized Children

A Cluster of Genes Involved in Polysaccharide Biosynthesis from Enterococcus faecalis OG1RF ⬇️

scientific article published on September 1, 1998

A Glimpse of Microbial Power in Preventive Medicine

scientific article published on 01 January 2016

A Microbe Associated with Sleep Revealed by a Novel Systems Genetic Analysis of the Microbiome in Collaborative Cross Mice

scientific article published on 02 January 2020

A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions.

scientific article published on 5 October 2015

A SNP discovery method to assess variant allele probability from next-generation resequencing data

scientific article

A catalog of reference genomes from the human microbiome

scientific article

A collagen-binding adhesin, Acb, and ten other putative MSCRAMM and pilus family proteins of Streptococcus gallolyticus subsp. gallolyticus (Streptococcus bovis Group, biotype I)

scientific article

A dominant mutation in RPE65 identified by whole-exome sequencing causes retinitis pigmentosa with choroidal involvement

scientific article

A dominant mutation in RPE65 identified by whole-exome sequencing causes retinitis pigmentosa with choroidal involvement.

scientific article

A dominant mutation in hexokinase 1 (HK1) causes retinitis pigmentosa

scientific article

A framework for human microbiome research

scientific article

A general method for the induction and screening of antisera for cDNA-encoded polypeptides: antibodies specific for a coronavirus putative polymerase-encoding gene

scientific article published on December 1989

A high-resolution map of human evolutionary constraint using 29 mammals

scientific article

A high-throughput percentage-of-binding strategy to measure binding energies in DNA-protein interactions: application to genome-scale site discovery

scientific article published on 24 July 2008

A longitudinal big data approach for precision health

scientific article published on 08 May 2019

A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2

scientific article

A new era in the genomics of bacteria

A non-human primate system for large-scale genetic studies of complex traits

scientific article

A novel Treponema pallidum antigen, TP0136, is an outer membrane protein that binds human fibronectin

scientific article

A novel intronic single nucleotide polymorphism in the myosin heavy polypeptide 4 gene is responsible for the mini-muscle phenotype characterized by major reduction in hind-limb muscle mass in mice

scientific article

A prospective microbiome-wide association study of food sensitization and food allergy in early childhood.

scientific article published on 20 June 2017

A second generation human haplotype map of over 3.1 million SNPs

scientific article

A vertebrate case study of the quality of assemblies derived from next-generation sequences

scientific article

ATP-dependent renaturation of DNA catalyzed by the recA protein of Escherichia coli

scientific article published on January 1979

Abstract 4746: Microbes in the tumor microenvironment: Bacterial influences on host immunity in colorectal cancer

Ace is a collagen-binding MSCRAMM from Enterococcus faecalis

scientific article published in September 1999

An Analysis of the Epidemic of Klebsiella pneumoniae Carbapenemase-Producing K. pneumoniae: Convergence of Two Evolutionary Mechanisms Creates the "Perfect Storm".

scientific article published on 27 September 2017

An Enterococcus faecalis ABC homologue (Lsa) is required for the resistance of this species to clindamycin and quinupristin-dalfopristin

scientific article

An Enterococcus faecium secreted antigen, SagA, exhibits broad-spectrum binding to extracellular matrix proteins and appears essential for E. faecium growth

scientific article

Anaerobic control of colicin E1 production

scientific article

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

scientific article published in June 2007

Analysis of Nuclear Receptor Pseudogenes in Vertebrates: How the Silent Tell Their Stories

article

Analysis of a gene cluster of Enterococcus faecalis involved in polysaccharide biosynthesis

scientific article

Analysis of transcriptome data in the red flour beetle, Tribolium castaneum

scientific article

Ancient hybridization and strong adaptation to viruses across African vervet monkey populations

scientific article published on 22 November 2016

Ancient hybridization and strong adaptation to viruses across African vervet monkey populations.

scientific article

Antigenic and virulence properties of Pasteurella haemolytica leukotoxin mutants.

scientific article

Application of next-generation sequencing to identify genes and mutations causing autosomal dominant retinitis pigmentosa (adRP).

scientific article

Approaches for integrating heterogeneous RNA-seq data reveal cross-talk between microbes and genes in asthmatic patients

scientific article published on 22 June 2020

Association of the Infant Gut Microbiome With Early Childhood Neurodevelopmental Outcomes: An Ancillary Study to the VDAART Randomized Clinical Trial

scientific article published on 01 March 2019

Astrovirus MLB2 viremia in febrile child

scientific article published in November 2011

Author Correction: Comparative and demographic analysis of orang-utan genomes

correction of a scholarly article

BAC library of T. pallidum DNA in E. coli

scientific article

Bacterial classifications derived from recA protein sequence comparisons.

scientific article published on December 1995

Bacterial communities of the coronal sulcus and distal urethra of adolescent males

scientific article

Binding of the recA protein of Escherichia coli to single- and double-stranded DNA.

scientific article

Biogeography and Microscale Diversity Shape the Biosynthetic Potential of Fungus-growing Ant-associated Pseudonocardia

scholarly article published 10 February 2019

Biogeography of the ecosystems of the healthy human body

scientific article

Biology of Treponema pallidum: correlation of functional activities with genome sequence data

scientific article

Bos taurus genome assembly

scientific article

Candidate genes that may be responsible for the unusual resistances exhibited by Bacillus pumilus SAFR-032 spores

scientific article published in 2013

CcpA is important for growth and virulence of Enterococcus faecium

scientific article

Ceftaroline-Resistant, Daptomycin-Tolerant, and Heterogeneous Vancomycin-Intermediate Methicillin-Resistant Staphylococcus aureus Causing Infective Endocarditis

scientific article published on 23 February 2017

Characteristic male urine microbiomes associate with asymptomatic sexually transmitted infection

scientific article

Characterization of Mucosal Dysbiosis of Early Colonic Neoplasia

scientific article published on 14 November 2019

Characterization of RecA1332 in vivo and in vitro. A role for alpha-helix E as a liaison between the subunit-subunit interface and the DNA and ATP binding domains of RecA protein

scientific article published in February 1998

Characterization of dihydrofolate reductase genes from trimethoprim-susceptible and trimethoprim-resistant strains of Enterococcus faecalis

scientific article

Characterization of emeA, a NorA homolog and multidrug resistance efflux pump, in Enterococcus faecalis

scientific article

Characterization of fsr, a regulator controlling expression of gelatinase and serine protease in Enterococcus faecalis OG1RF

scientific article

Characterization of mutations in the PAS domain of the EvgS sensor kinase selected by laboratory evolution for acid resistance in Escherichia coli

scientific article published on 24 July 2014

Characterization of the bacterial and fungal microbiome in indoor dust and outdoor air samples: a pilot study

scientific article

Characterization of the cytoplasmic filament protein gene (cfpA) of Treponema pallidum subsp. pallidum

scientific article published on June 1996

Characterizing the cancer genome in lung adenocarcinoma

scientific article

Chemotherapy-induced oral mucositis is associated with detrimental bacterial dysbiosis

scientific article published on 25 April 2019

Chimeric genetics with beta-galactosidase.

scientific article published on January 1983

Chromosome rearrangement and diversification of Francisella tularensis revealed by the type B (OSU18) genome sequence

scientific article

Clinical isolates of Enterococcus faecium exhibit strain-specific collagen binding mediated by Acm, a new member of the MSCRAMM family

scientific article

Cluster analysis of genome-wide expression differences in disease-unaffected ileal mucosa in inflammatory bowel diseases

Colicins produced by the Escherichia fergusonii strains closely resemble colicins encoded by Escherichia coli

scientific article

Colicins produced by the Escherichia fergusonii strains closely resemble colicins encoded by Escherichia coli

scholarly article by D Smajs published in March 2002

Colon Cancer Prevention with Walnuts: A Longitudinal Study in Mice from the Perspective of a Gut Enterotype-like Cluster

scientific article published on 09 December 2019

Community annotation: procedures, protocols, and supporting tools.

scientific article published on 25 October 2006

Community characteristics of the gut microbiomes of competitive cyclists

scientific article published on 10 August 2017

Comparative analysis of the bovine MHC class IIb sequence identifies inversion breakpoints and three unexpected genes

scientific article published in April 2006

Comparative and demographic analysis of orang-utan genomes

scientific article

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution

scientific article

Comparing Vertebrate Whole-Genome Shotgun Reads to the Human Genome ⬇️

scientific article published on November 1, 2001

Comparison of Whole and Acellular Bronchoalveolar Lavage to Oral Wash Microbiomes. Should Acellular Bronchoalveolar Lavage Be the Standard?

scientific article published in January 2014

Comparison of genomic DNAs of different enterococcal isolates using restriction endonucleases with infrequent recognition sites

scientific article published on September 1990

Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes

scientific article

Comparison of the respiratory microbiome in healthy nonsmokers and smokers

scientific article published on May 2013

Complete Genome Sequence of Rickettsia typhi and Comparison with Sequences of Other Rickettsiae

scientific article

Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete

scientific article

Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes

scientific article

Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays

scientific article

Complete genome sequence of Treponema pallidum strain DAL-1.

scientific article published on 24 September 2012

Complete genome sequence of Treponema paraluiscuniculi, strain Cuniculi A: the loss of infectivity to humans is associated with genome decay

scientific article (publication date: 2011)

Complete nucleotide sequence of a P2 family lysogenic bacteriophage, varphiMhaA1-PHL101, from Mannheimia haemolytica serotype A1.

scientific article

Conditional adherence of Enterococcus faecalis to extracellular matrix proteins

Conditional adherence ofEnterococcus faecalisto extracellular matrix proteins

scientific article published on 01 August 1998

Conjugal transfer of plasmid DNA from Escherichia coli to enterococci: a method to make insertion mutations

scientific article published in January 1998

Consent insufficient for data release-Response

scientific article published on 01 May 2019

Conservation of Ebp-type pilus genes among Enterococci and demonstration of their role in adherence of Enterococcus faecalis to human platelets

scientific article

Construction of small genome BAC library for functional and genomic applications

scientific article published in January 2004

Correction: Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis

scientific article published on 28 July 2015

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

scientific article published in February 2018

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

article

Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem

scientific article

Creating a honey bee consensus gene set

scientific article published on January 2007

Cyanobacterial signature genes

scientific article published on 01 January 2003

DNA and Nucleoside Triphosphate Binding Properties of recA Protein from Escherichia coli

scientific article published on 01 January 1981

DNA repair mutants of Rhodobacter sphaeroides

scientific article published on June 1995

DNA sequence of the Pasteurella haemolytica leukotoxin gene cluster

scientific article

Daptomycin-resistant Enterococcus faecalis diverts the antibiotic molecule from the division septum and remodels cell membrane phospholipids

scientific article published on 23 July 2013

Deciphering functional redundancy in the human microbiome

scientific article published on 04 December 2020

Detection of Viruses in Young Children With Fever Without an Apparent Source ⬇️

scientific article published on November 5, 2012

Detection of a murine coronavirus nonstructural protein encoded in a downstream open reading frame.

scientific article

Diet during Pregnancy and Infancy and the Infant Intestinal Microbiome

scientific article published on 30 August 2018

Direct selection of human genomic loci by microarray hybridization

scientific article

Direct selection of mutations reducing transcription or translation of the recA gene of Escherichia coli with a recA-lacZ protein fusion

scientific article

Discriminatory Indices of Typing Methods for Epidemiologic Analysis of Contemporary Staphylococcus aureus Strains

scientific article

Diversity of ace, a gene encoding a microbial surface component recognizing adhesive matrix molecules, from different strains of Enterococcus faecalis and evidence for production of ace during human infections

scientific article published on September 2000

Dynamic building of a BAC clone tiling path for the Rat Genome Sequencing Project

scientific article published on April 2004

Dynamic changes in the subgingival microbiome and their potential for diagnosis and prognosis of periodontitis

scientific article

ENCODE: more genomic empowerment

scientific article

Effect of Advanced HIV Infection on the Respiratory Microbiome

scientific article published on 02 February 2016

Effect of Disruption of a Gene Encoding an Autolysin of Enterococcus faecalis OG1RF ⬇️

scientific article published on November 1, 1998

Effects of Enterococcus faecalis fsr genes on production of gelatinase and a serine protease and virulence

scientific article

Effects of Walnut Consumption on Colon Carcinogenesis and Microbial Community Structure

scientific article published on 23 May 2016

Effects of diet on the childhood gut microbiome and its implications for atopic dermatitis

scientific article published on 19 December 2018

Emergence of Rotavirus G12P[8] in St. Louis During the 2012-2013 Rotavirus Season

scientific article

Emerging view of the human virome

scientific article

Enteric defensins are essential regulators of intestinal microbial ecology

scientific article published on 22 October 2009

Enterococci: new aspects of an old organism.

scientific article

Enterococcus faecalis adhesin, ace, mediates attachment to extracellular matrix proteins collagen type IV and laminin as well as collagen type I.

scientific article published on September 2000

Enterococcus faecalis antigens in human infections ⬇️

scientific article published on October 1, 1997

Enterococcus faecalis multi-drug resistance transporters: application for antibiotic discovery

scientific article

Enterotypes in the landscape of gut microbial community composition.

scientific article published on 18 December 2017

Enzymatic activities of the RecA protein of Escherichia coli

scientific article published on 01 August 1982

Epidemiological investigation of Pseudomonas aeruginosa isolates from a six-year-long hospital outbreak using high-throughput whole genome sequencing

scientific article published on 17 October 2013

Epidemiology of Staphylococcus aureus during space flight

scholarly article by D Pierson published 31 December 1996 in FEMS Immunology and Medical Microbiology

Epidemiology of Staphylococcus aureus during space flight

scientific article published on 01 December 1996

Erratum for Arias et al., "A Prospective Cohort Multicenter Study of Molecular Epidemiology and Phylogenomics of Staphylococcus aureus Bacteremia in Nine Latin American Countries".

scientific article published on 23 February 2018

Erratum to: The real cost of sequencing: scaling computation to keep pace with data generation

scientific article published on 28 April 2016

Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis

scientific article published on 06 November 2019

Evidence that the enterococcal polysaccharide antigen gene (epa) cluster is widespread in Enterococcus faecalis and influences resistance to phagocytic killing of E. faecalis

scientific article published on April 2002

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

scientific article

Evolutionary Genomics of Salmonella enterica Subspecies

scientific article published on 5 March 2013

Evolutionary Genomics of Salmonella enterica Subspecies

scientific article published on 2 April 2013

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

scientific article

Evolving methods for the assembly of large genomes

scientific article published in January 2003

Exome-based mapping and variant prioritization for inherited Mendelian disorders

scientific article published on 20 February 2014

Exploration of bacterial community classes in major human habitats

scientific article (publication date: 7 May 2014)

Expression capable library for studies of Neisseria gonorrhoeae, version 1.0.

scientific article

Expression of the Pasteurella haemolytica leukotoxin is inhibited by a locus that encodes an ATP-binding cassette homolog.

scientific article published on September 1993

Extensive Gene Amplification as a Mechanism for Piperacillin-Tazobactam Resistance in Escherichia coli.

scientific article published on 24 April 2018

Extreme Sensory Complexity Encoded in the 10-Megabase Draft Genome Sequence of the Chromatically Acclimating Cyanobacterium Tolypothrix sp. PCC 7601

scientific article published on 7 May 2015

Factors influencing the infant gut microbiome at age 3-6 months: Findings from the ethnically diverse Vitamin D Antenatal Asthma Reduction Trial (VDAART).

scientific article published on 13 October 2016

Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence

scientific article

From microbial genome sequence to applications

scientific article

Generation and testing of mutants of Enterococcus faecalis in a mouse peritonitis model

scientific article published in November 1998

Generation and validation of a Shewanella oneidensis MR-1 clone set for protein expression and phage display

scientific article

Generation of auxotrophic mutants of Enterococcus faecalis

scientific article

Generation of restriction map of Enterococcus faecalis OG1 and investigation of growth requirements and regions encoding biosynthetic function

scientific article published on August 1993

Genetic Basis of Aerobically Supported Voluntary Exercise: Results from a Selection Experiment with House Mice

scientific article published on 25 September 2020

Genetic basis for in vivo daptomycin resistance in enterococci

scientific article

Genetic diversity in Treponema pallidum: implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws

scientific article

Genetic organization of plasmid ColJs, encoding colicin Js activity, immunity, and release genes.

scientific article published in July 2001

Genetic testing, biotechnology, and GMOs: A snapshot of public opinion, 2003 through 2004.

scientific article published in July 2005

Genetic variation and gene expression across multiple tissues and developmental stages in a non-human primate

article

Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate

scientific article

Genetics of bacteriophage P22. III. The late operon

scientific article published in October 1980

Genetics of bacteriophage P22. IV. Correlation of genetic and physical map using translocatable drug-resistance elements

scientific article published in October 1980

Genome Sequence of Acetomicrobium hydrogeniformans OS1.

scientific article

Genome Sequences of 15 Gardnerella vaginalis Strains Isolated from the Vaginas of Women with and without Bacterial Vaginosis

scientific article published on 29 September 2016

Genome analysis of Treponema pallidum subsp. pallidum and subsp. pertenue strains: most of the genetic differences are localized in six regions

scientific article

Genome analysis of a highly virulent serotype 1 strain of Streptococcus pneumoniae from West Africa

scientific article

Genome differences between Treponema pallidum subsp. pallidum strain Nichols and T. paraluiscuniculi strain Cuniculi A.

scientific article published on 24 September 2007

Genome remodelling in a basal-like breast cancer metastasis and xenograft

scientific article

Genome scale identification of Treponema pallidum antigens

scientific article

Genome sequence of Fusobacterium nucleatum subspecies polymorphum - a genetically tractable fusobacterium

scientific article

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

scientific article

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

article

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

scientific article

Genome sequence of the emerging pathogen Helicobacter canadensis

scientific article published on 19 June 2009

Genome sequences of the honey bee pathogens Paenibacillus larvae and Ascosphaera apis

scientific article published in October 2006

Genome sequencing reveals widespread virulence gene exchange among human Neisseria species

scientific article

Genome-wide detection and characterization of positive selection in human populations

scientific article

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds

scientific article

Genomic analysis of the nuclear receptor family: new insights into structure, regulation, and evolution from the rat genome

scientific article

Genomic approaches to studying the human microbiota ⬇️

scientific article published on September 13, 2012

Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

scientific article published in August 2014

Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages

scientific article

Genomic variation landscape of the human gut microbiome

scientific article

Genomics and bacterial pathogenesis.

scientific article

Genomics. Genome project standards in a new era of sequencing

scientific article

Graph accordance of next-generation sequence assemblies

scientific article

Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study

scientific article published on 8 March 2016

HCoDES reveals chromosomal DNA end structures with single-nucleotide resolution

scientific article

High mobility group (HMG-box) genes in the honeybee fungal pathogen Ascosphaera apis

scientific article published in July 2007

High-resolution genetic mapping in the diversity outbred mouse population identifies Apobec1 as a candidate gene for atherosclerosis

scientific article

High-resolution quantification of hepatitis C virus genome-wide mutation load and its correlation with the outcome of peginterferon-alpha2a and ribavirin combination therapy

scientific article

High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak

scientific article published on 17 March 2010

Host genes related to paneth cells and xenobiotic metabolism are associated with shifts in human ileum-associated microbial composition

scientific article

Household air pollution and the lung microbiome of healthy adults in Malawi: a cross-sectional study

scientific article published on 11 August 2016

Human glutamate pyruvate transaminase (GPT): localization to 8q24.3, cDNA and genomic sequences, and polymorphic sites

scientific article published on March 1997

Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Characterization of ATP hydrolysis.

scientific article published in August 1981

Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Hydrolysis of UTP

scientific article published on 01 August 1981

Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Steady state kinetic analysis of ATP hydrolysis

scientific article published on 01 August 1981

Hypothesis Testing of Metagenomic Data

article

Hypothesis testing and power calculations for taxonomic-based human microbiome data

scientific article

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

scientific article published in June 2007

Identification and phenotypic characterization of a second collagen adhesin, Scm, and genome-based identification and analysis of 13 other predicted MSCRAMMs, including four distinct pilus loci, in Enterococcus faecium

scientific article published in October 2008

Identification and transcriptional analysis of a Treponema pallidum operon encoding a putative ABC transport system, an iron-activated repressor protein homolog, and a glycolytic pathway enzyme homolog.

scientific article published on September 1997

Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis

scientific article published on 30 June 2015

Identification of a Novel Gene on 10q22.1 Causing Autosomal Dominant Retinitis Pigmentosa (adRP).

scientific article published on January 2016

Identification of disease-causing mutations in autosomal dominant retinitis pigmentosa (adRP) using next-generation DNA sequencing

scientific article

Identification of functional variants for cleft lip with or without cleft palate in or near PAX7, FGFR2, and NOG by targeted sequencing of GWAS loci

scientific article

Identification of novel and cross-species seroreactive proteins from Bacillus anthracis using a ligation-independent cloning-based, SOS-inducible expression system

scientific article

Illuminating the agent of syphilis: The Treponema pallidum genome project (minireview) ⬇️

scientific article published on 01 April 1998

Impact of Age, Caloric Restriction, and Influenza Infection on Mouse Gut Microbiome: An Exploratory Study of the Role of Age-Related Microbiome Changes on Influenza Responses

scientific article published on 20 September 2017

Improving Characterization of Understudied Human Microbiomes Using Targeted Phylogenetics

scientific article published on 25 February 2020

In vivo testing of an Enterococcus faecalis efaA mutant and use of efaA homologs for species identification

scientific article

Inactivation of SAM-methyltransferase is the mechanism of attenuation of a historic louse borne typhus vaccine strain

scientific article published in 2014

Increased prevalence of anellovirus in pediatric patients with fever

scientific article

Increased production of colicin E1 in stationary phase

scientific article

Individuality and temporal stability of the human gut microbiome.

scientific article published in January 2013

Inflammatory bowel diseases phenotype, C. difficile and NOD2 genotype are associated with shifts in human ileum associated microbial composition

scientific article

Initial sequencing and analysis of the human genome

scientific article published on 15 February 2001

Initiation of general recombination catalyzed in vitro by the recA protein of Escherichia coli

scientific article published on June 1979

Integrative Personal Omics Profiles during Periods of Weight Gain and Loss.

scientific article published on 16 January 2018

Interaction of the CRP-cAMP complex with the cea regulatory region

scientific article published on 01 February 1989

Interaction of the RecA protein of Escherichia coli with single-stranded oligodeoxyribonucleotides.

scientific article

Interaction of the recA protein of Escherichia coli with adenosine 5'-O-(3-thiotriphosphate)

scientific article published on 01 August 1981

Intermittent Fasting Confers Protection in CNS Autoimmunity by Altering the Gut Microbiota.

scientific article published in June 2018

Involvement of PhoP-PhoS homologs in Enterococcus faecalis virulence

scientific article published on April 2002

Isolation of Methicillin-resistant Staphylococcus aureus and Multidrug-resistant Elizabethkingia meningoseptica From Neonates Within Minutes of Birth.

scientific article published on January 2017

Isolation of Pasteurella haemolytica leukotoxin mutants.

scientific article

Lambda placMu: a transposable derivative of bacteriophage lambda for creating lacZ protein fusions in a single step.

scientific article

Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF.

scientific article published on 8 July 2008

Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens

scientific article (publication date: June 2013)

Longitudinal Analysis of Serum Cytokine Levels and Gut Microbial Abundance Links IL-17/IL-22 with Clostridia and Insulin Sensitivity in Humans

scientific article published on 04 May 2020

Longitudinal Prediction of the Infant Gut Microbiome with Dynamic Bayesian Networks

scientific article published on 8 February 2016

Longitudinal analysis of the premature infant intestinal microbiome prior to necrotizing enterocolitis: a case-control study

scientific article

Longitudinal multi-omics of host-microbe dynamics in prediabetes

scientific article published on 29 May 2019

Low-resolution sequencing of Rhodobacter sphaeroides 2.A.1T: chromosome II is a true chromosome ⬇️

scientific article published on October 1, 1997

Lung microbiome in human immunodeficiency virus infection

scientific article

MSC: a metagenomic sequence classification algorithm

scientific article published on 01 September 2019

Macrolide treatment failure in a case of secondary syphilis: a novel A2059G mutation in the 23S rRNA gene of Treponema pallidum subsp. pallidum.

scientific article published in June 2009

Making the Leap from Research Laboratory to Clinic: Challenges and Opportunities for Next-Generation Sequencing in Infectious Disease Diagnostics

scientific article

Mapping protein-ligand interactions using whole genome phage display libraries.

scientific article

Measurement of in vivo expression of the recA gene of Escherichia coli by using lacZ gene fusions ⬇️

scientific article published on October 1, 1984

Meta-analysis of the lung microbiota in pulmonary tuberculosis

scientific article published on 22 February 2018

Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment

scientific article published on 30 June 2015

Metagenomic Approach for Identification of the Pathogens Associated with Diarrhea in Stool Specimens

scientific article published on 4 December 2015

Metagenomic analysis of double-stranded DNA viruses in healthy adults

scientific article

Methicillin-Susceptible, Vancomycin-Resistant Staphylococcus aureus, Brazil

scientific article

Microbial glutamate metabolism predicts intravenous cocaine self-administration in Diversity Outbred mice

Microbial sequencing to improve individual and population health

scientific article published on 19 November 2014

Microbiome Signatures Associated With Steatohepatitis and Moderate to Severe Fibrosis in Children With Nonalcoholic Fatty Liver Disease

scientific article published on 27 June 2019

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

scientific article

Modernizing reference genome assemblies

scientific article

Molecular Epidemiology and Phylogenomics of Staphylococcus aureus Bacteremia in Latin-America: A Prospective Cohort Multicenter Study in Nine Countries

scientific article

Molecular characterization of a widespread, pathogenic, and antibiotic resistance-receptive Enterococcus faecalis lineage and dissemination of its putative pathogenicity island

scientific article published on August 2005

Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals

scientific article published on 6 August 2015

Multiple chromosomes in bacteria: structure and function of chromosome II of Rhodobacter sphaeroides 2.4.1T.

scientific article

Mutation of the promoter and LexA binding sites of cea, the gene encoding colicin E1.

scientific article published on February 1989

NIH working group report-using genomic information to guide weight management: From universal to precision treatment

scientific article

New statistical method identifies cytokines that distinguish stool microbiomes

scientific article published on 27 December 2019

Next-generation pathogen genomics

scientific article

Nodulation and effective nitrogen fixation of Macroptilium atropurpureum (siratro) by Burkholderia tuberum, a nodulating and plant growth promoting beta-proteobacterium, are influenced by environmental factors

article

NotI genomic cleavage map of Escherichia coli K-12 strain MG1655.

scientific article

Novel bacterial taxa in the human microbiome

scientific article

Obesity and obesogenic growth are both highly heritable and modified by diet in a nonhuman primate model, the African green monkey (Chlorocebus aethiops sabaeus).

scientific article

Open reading frame expression vectors: a general method for antigen production in Escherichia coli using protein fusions to beta-galactosidase.

scientific article published on July 1983

Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities

scientific article

Oral Microbiome in HIV-Infected Women: Shifts in the Abundance of Pathogenic and Beneficial Bacteria Are Associated with Aging, HIV Load, CD4 Count, and Antiretroviral Therapy

article

Pan-genome and comparative genome analyses of propionibacterium acnes reveal its genomic diversity in the healthy and diseased human skin microbiome

scientific article published on 30 April 2013

Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032

scientific article

Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America

scientific article published on 5 June 2015

Patterned progression of bacterial populations in the premature infant gut.

scientific article

Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations

scientific article

Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study

scientific article

Phosphate transporters in marine phytoplankton and their viruses: cross-domain commonalities in viral-host gene exchanges

scientific article

Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects

scientific article (publication date: November 2006)

Phylogenomics and the dynamic genome evolution of the genus Streptococcus.

scientific article

Physical map of the genome of Treponema pallidum subsp. pallidum (Nichols)

scientific article published on April 1995

Plant-associated symbiotic Burkholderia species lack hallmark strategies required in mammalian pathogenesis

scientific article

Pooled genomic indexing of rhesus macaque

scientific article

Precise dissection of an Escherichia coli O157:H7 outbreak by single nucleotide polymorphism analysis

scientific article

Preparation of BAC libraries from bacterial genomes by in vitro packaging

scientific article published in January 2004

Prepublication data sharing

scientific article

Propionibacterium acnes strain populations in the human skin microbiome associated with acne

scientific article

Proteomics and metabolomics for analysis of the dynamics of microbiota

scientific article published on 28 December 2017

Publisher Correction: Ancient hybridization and strong adaptation to viruses across African vervet monkey populations

scientific article published on 01 November 2018

Publisher Correction: Enterotypes in the landscape of gut microbial community composition

scientific article published on 13 February 2018

Quantitation and composition of cutaneous microbiota in diabetic and nondiabetic men.

scientific article published on 8 January 2013

R2d2 Drives Selfish Sweeps in the House Mouse

scientific article published on 15 February 2016

Rapid Evolution by Positive Darwinian Selection in T-Cell Antigen CD4 in Primates

Rapid growth is a dominant predictor of hepcidin suppression and declining ferritin in Gambian infants

scientific article published on 07 February 2019

Rapid replacement by non-vaccine pneumococcal serotypes may mitigate the impact of the pneumococcal conjugate vaccine on nasopharyngeal bacterial ecology

scientific article published on 15 August 2017

Reactivity of antibodies from syphilis patients to a protein array representing the Treponema pallidum proteome

scientific article published in March 2006

RecA protein-dependent proteolysis of bacteriophage lambda repressor Characterization of the reaction and stimulation by DNA-binding proteins

scientific article published on 01 November 1981

Recognition of pore-forming colicin Y by its cognate immunity protein

scientific article published on 01 May 2006

Regional Specificity of Illegitimate Recombination Associated with the Translocatable Ampicillin-resistance Element Tn1 ⬇️

scientific article published on January 1, 1979

Regional specificity of illegitimate recombination by the translocatable ampicillin-resistance element Tn1 in the genome of phage P22.

scientific article published on July 1979

Repetitive Sequence-Based PCR versus Pulsed-Field Gel Electrophoresis for Typing of Enterococcus faecalis at the Subspecies Level ⬇️

scientific article published on January 1, 1998

Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters

scientific article

Resistance to Ceftazidime-Avibactam Is Due to Transposition of KPC in a Porin-Deficient Strain of Klebsiella pneumoniae with Increased Efflux Activity

scientific article published on 24 July 2017

Revised sequence and annotation of the Rhodobacter sphaeroides 2.4.1 genome

scientific article published on December 2012

Role of Clinicogenomics in Infectious Disease Diagnostics and Public Health Microbiology

scientific article

Secretion and expression of the Pasteurella haemolytica Leukotoxin

scientific article

Segment-directed mutagenesis: construction in vitro of point mutations limited to a small predetermined region of a circular DNA molecule ⬇️

scientific article published on September 1, 1980

Selection of models for the analysis of risk-factor trees: leveraging biological knowledge to mine large sets of risk factors with application to microbiome data

scientific article

Sensitization of bacteria to danofloxacin by temperate prophages.

scientific article

Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections

scientific article

Sequence analysis of the human virome in febrile and afebrile children

scientific article

Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits

scientific article published on 20 June 2015

SfiI genomic cleavage map of Escherichia coli K-12 strain MG1655.

scientific article

Shedding genomic light on Aristotle's lantern

scientific article

Short, interspersed repetitive DNA sequences in prokaryotic genomes.

scientific article

Simple sequence repeats in Helicobacter canadensis and their role in phase variable expression and C-terminal sequence switching

scientific article

Sixty years of genome biology

scientific article published on 25 April 2013

Small bowel resection induces long-term changes in the enteric microbiota of mice.

scientific article

Somatic mutations affect key pathways in lung adenocarcinoma

scientific article

Static DNA bending and protein interactions within the Pasteurella haemolytica leukotoxin promoter region: development of an activation model for leukotoxin transcriptional control.

scientific article

Statistical object data analysis of taxonomic trees from human microbiome data

scientific article

Structure of rrn operons in pathogenic non-cultivable treponemes: sequence but not genomic position of intergenic spacers correlates with classification of Treponema pallidum and Treponema paraluiscuniculi strains.

scientific article published on 18 October 2012

Structure, function and diversity of the healthy human microbiome

scientific article

Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus

scientific article

Supraglottic Lung Microbiome Taxa Are Associated with Pulmonary Abnormalities in an HIV Longitudinal Cohort

scientific article published on 12 August 2020

Sweetness and light: illuminating the honey bee genome

scientific article published on October 2006

Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes

scientific article published on 6 June 2016

Symbiotic organs shaped by distinct modes of genome evolution in cephalopods

scientific article published on 11 January 2019

Systematic cloning of Treponema pallidum open reading frames for protein expression and antigen discovery

scientific article

Systems biology of the vervet monkey

scientific article

TIGRA: a targeted iterative graph routing assembler for breakpoint assembly

scientific article published on 04 December 2013

Tandem duplications of the lac region of the Escherichia coli chromosome

scientific article published on 01 April 1991

Targeted high-throughput DNA sequencing for gene discovery in retinitis pigmentosa

scientific article

Temporal control of colicin E1 induction

scientific article

The Atlas genome assembly system

scientific article published in April 2004

The DNA sequence of the human X chromosome

scientific article published on 17 March 2005

The DNA sequence, annotation and analysis of human chromosome 3

scientific article (publication date: 27 April 2006)

The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain

scientific article published on 05 June 2019

The Human Microbiome Project

The Impact of Next-Generation Sequencing Technologies on Metagenomics

The Neonatal Microbiome and Necrotizing Enterocolitis

article

The complete genome of an individual by massively parallel DNA sequencing

scientific article

The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse

scientific article

The conjunctival microbiome in health and trachomatous disease: a case control study

scientific article

The finished DNA sequence of human chromosome 12

scientific article

The genome of Apis mellifera: dialog between linkage mapping and sequence assembly.

scientific article published on January 2007

The genome of C57BL/6J "Eve", the mother of the laboratory mouse genome reference strain

The genome of Treponema pallidum: new light on the agent of syphilis

scholarly article by George Weinstock published October 1998 in FEMS Microbiology Reviews

The genome of Treponema pallidum: new light on the agent of syphilis

scientific article published on 01 October 1998

The genome of the model beetle and pest Tribolium castaneum

scientific article

The genome of the sea urchin Strongylocentrotus purpuratus

scientific article

The genome of the social amoeba Dictyostelium discoideum

scientific article

The genome of the vervet (Chlorocebus aethiops sabaeus)

scientific article published on 16 September 2015

The genome sequence of Drosophila melanogaster

scientific article

The genome sequence of Mannheimia haemolytica A1: insights into virulence, natural competence, and Pasteurellaceae phylogeny

scientific article

The genome sequence of Treponema pallidum, the syphilis spirochete: will clinicians benefit?

scientific article published on 01 February 2000

The genome sequence of taurine cattle: a window to ruminant biology and evolution

scientific article

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

scientific article

The importance of the microbiome in epidemiologic research

scientific article published on 7 April 2016

The iron- and temperature-regulated cjrBC genes of Shigella and enteroinvasive Escherichia coli strains code for colicin Js uptake

scientific article

The promoter of the recA gene of Escherichia coli

article

The real cost of sequencing: scaling computation to keep pace with data generation

scientific article

The relationships between environmental bacterial exposure, airway bacterial colonization, and asthma

scientific article

The transcriptional profile of coronary arteritis in Kawasaki disease

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The upper-airway microbiota and loss of asthma control among asthmatic children

scientific article published on 16 December 2019

The volatile microbiome ⬇️

scientific article published on May 30, 2011

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

Toward unrestricted use of public genomic data:

scientific article

Transcriptome of Treponema pallidum: gene expression profile during experimental rabbit infection

scientific article

Transferable vancomycin resistance in a community-associated MRSA lineage

scientific article

Translocation of Enterococcus faecalis strains across a monolayer of polarized human enterocyte-like T84 cells

scientific article published on March 2004

Transmission of Staphylococcus aureus from Humans to Green Monkeys in The Gambia as Revealed by Whole-Genome Sequencing

scientific article

Transposable lambda placMu bacteriophages for creating lacZ operon fusions and kanamycin resistance insertions in Escherichia coli.

scientific article

Transposition of lambda placMu is mediated by the A protein altered at its carboxy-terminal end.

scientific article published in November 1988

UTP Is a Cofactor for the DNA Strand Exchange Reaction Performed by the RecA Protein ofEscherichia coli†

scientific article published on 01 May 1998

Use of bronchoalveolar lavage to assess the respiratory microbiome: signal in the noise

scientific article

Use of transcription and translation signals from the colicin El gene to express DNA sequences in Escherichia coli

article

Validation of Metagenomic Next-Generation Sequencing Tests for Universal Pathogen Detection

scientific article

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

scientific article

Virome genomics: a tool for defining the human virome

scientific article

What everybody should know about the rat genome and its online resources

scientific article (publication date: May 2008)

Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains

scientific article

Whole genome sequence of the Treponema Fribourg-Blanc: unspecified simian isolate is highly similar to the yaws subspecies

scientific article

Whole genome sequence of the Treponema pallidum subsp. endemicum strain Bosnia A: the genome is related to yaws treponemes but contains few loci similar to syphilis treponemes.

scientific article

Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence

scientific article

Whole-Genome Sequencing of Salmonella enterica subsp. enterica Serovar Cubana Strains Isolated from Agricultural Sources

scientific article published on 23 January 2014

Whole-genome analyses of Enterococcus faecium isolates with diverse daptomycin MICs

scientific article

Whole-genome analysis of a daptomycin-susceptible enterococcus faecium strain and its daptomycin-resistant variant arising during therapy

scientific article published on 31 October 2012

Widespread colonization of the lung by Tropheryma whipplei in HIV infection

scientific article published on May 2013

XbaI and BlnI genomic cleavage maps of Escherichia coli K-12 strain MG1655 and comparative analysis of other strains.

scientific article

[9] Use of open reading frame expression vectors

scientific article published on 01 January 1987

mBLAST: Keeping up with the sequencing explosion for (meta)genome analysis

scientific article

recA protein-catalyzed strand assimilation: stimulation by Escherichia coli single-stranded DNA-binding protein ⬇️

scientific article published on February 1, 1980

tif-1 mutation alters polynucleotide recognition by the recA protein of Escherichia coli

scientific article

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