List of works - Sergi Padilla-Parra

A dynamic three-step mechanism drives the HIV-1 pre-fusion reaction

article

Actin Dynamics and HIV-1 Entry

scientific article published on 14 April 2016

Actomyosin-generated tension on cadherin is similar between dividing and non-dividing epithelial cells in early Xenopus laevis embryos

scientific article

An essential role for the Zn2+ transporter ZIP7 in B cell development

scientific article published on 04 February 2019

Astrocytes Resist HIV-1 Fusion but Engulf Infected Macrophage Material

scientific article published on February 2017

Author Correction: A dynamic three-step mechanism drives the HIV-1 pre-fusion reaction

scientific article published on 01 June 2019

Calibration-free <em>In Vitro</em> Quantification of Protein Homo-oligomerization Using Commercial Instrumentation and Free, Open Source Brightness Analysis Software

scientific article published in 2018

Calibration-free In Vitro Quantification of Protein Homo-oligomerization Using Commercial Instrumentation and Free, Open Source Brightness Analysis Software

scientific article published on 17 July 2018

Chromatin condensation fluctuations rather than steady-state predict chromatin accessibility

scientific article published on 01 July 2019

Correction to "Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library"

scientific article published on 28 October 2019

Correction: 827Spatio-Temporal Quantification of FRET in Living Cells by Fast Time-Domain FLIM: A Comparative Study of Non-Fitting Methods.

scientific article published on 2 August 2013

Detecting protein aggregation and interaction in live cells: A guide to number and brightness.

scientific article published on 5 December 2017

Drosophila OTK Is a Glycosaminoglycan-Binding Protein with High Conformational Flexibility

scientific article published on 13 March 2020

Dual-color fluorescence lifetime correlation spectroscopy to quantify protein-protein interactions in live cell.

scientific article

Dynamic interaction of amphiphysin with N-WASP regulates actin assembly

scientific article

Dynamin-2 Stabilizes the HIV-1 Fusion Pore with a Low Oligomeric State.

scientific article published on January 2017

Endogenous Labeling for Light Microscopy during HIV-1 Immune Responses

scientific article published on 02 November 2020

FRET microscopy in the living cell: Different approaches, strengths and weaknesses ⬇️

scientific article published on March 13, 2012

Fusion of mature HIV-1 particles leads to complete release of a gag-GFP-based content marker and raises the intraviral pH

scientific article (publication date: 2013)

Glycolysis downregulation is a hallmark of HIV-1 latency and sensitizes infected cells to oxidative stress

scientific article published on 20 July 2021

Homology-guided identification of a conserved motif linking the antiviral functions of IFITM3 to its oligomeric state

scientific article published on 16 May 2020

Homology-guided identification of a conserved motif linking the antiviral functions of IFITM3 to its oligomeric state

scientific article published on 28 October 2020

Imaging real-time HIV-1 virion fusion with FRET-based biosensors

scientific article

Improved cellular uptake of perfluorocarbon nanoparticles for in vivo murine cardiac 19F MRS/MRI and temporal tracking of progenitor cells

scientific article published on 16 November 2018

Lysosome sorting of β-glucocerebrosidase by LIMP-2 is targeted by the mannose 6-phosphate receptor

scientific article

Multifaceted mechanisms of HIV-1 entry inhibition by human α-defensin

scientific article

Multiplexing PKA and ERK1&2 kinases FRET biosensors in living cells using single excitation wavelength dual colour FLIM.

scientific article

Non fitting based FRET-FLIM analysis approaches applied to quantify protein-protein interactions in live cells

scientific article published on 17 May 2011

On the Whereabouts of HIV-1 Cellular Entry and Its Fusion Ports

scientific article published on 9 September 2017

Orthogonal fluorescent chemogenetic reporters for multicolor imaging

scientific article published on 10 August 2020

Pinpointing retrovirus entry sites in cells expressing alternatively spliced receptor isoforms by single virus imaging

scientific article

Quantitative FRET analysis by fast acquisition time domain FLIM at high spatial resolution in living cells.

scientific article published on 6 June 2008

Quantitative FRET-FLIM-BlaM to Assess the Extent of HIV-1 Fusion in Live Cells

scientific article published on 12 February 2020

Quantitative comparison of different fluorescent protein couples for fast FRET-FLIM acquisition.

scientific article published on October 2009

Quantitative imaging of endosome acidification and single retrovirus fusion with distinct pools of early endosomes

scientific article

Quantitative study of protein-protein interactions in live cell by dual-color fluorescence correlation spectroscopy.

scientific article

Repulsive guidance molecule is a structural bridge between neogenin and bone morphogenetic protein

scientific article published on 4 May 2015

Single-cell glycolytic activity regulates membrane tension and HIV-1 fusion

scientific article published on 21 February 2020

Spatio-Temporal Quantification of FRET in living cells by fast time-domain FLIM: a comparative study of non-fitting methods [corrected].

scientific article

Structural Basis for Plexin Activation and Regulation

scientific article

Structural basis of semaphorin-plexin cis interaction

scientific article published on 05 June 2020

Structure dynamics of HIV-1 Env trimers on native virions engaged with living T cells

scientific article published on 27 October 2021

Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library

article

Synchronized retrovirus fusion in cells expressing alternative receptor isoforms releases the viral core into distinct sub-cellular compartments

scientific article

The nature and nurture of cell heterogeneity: accounting for macrophage gene-environment interactions with single-cell RNA-Seq

scientific article

The β-Lactamase Assay: Harnessing a FRET Biosensor to Analyse Viral Fusion Mechanisms

scientific article

Time-domain fluorescence lifetime imaging microscopy: a quantitative method to follow transient protein-protein interactions in living cells

scientific article

Toremifene interacts with and destabilizes the Ebola virus glycoprotein

scientific article published on 29 June 2016

List of works by Sergi Padilla-Parra

A dynamic three-step mechanism drives the HIV-1 pre-fusion reaction

Actin Dynamics and HIV-1 Entry

Actomyosin-generated tension on cadherin is similar between dividing and non-dividing epithelial cells in early Xenopus laevis embryos

An essential role for the Zn2+ transporter ZIP7 in B cell development

Astrocytes Resist HIV-1 Fusion but Engulf Infected Macrophage Material

Author Correction: A dynamic three-step mechanism drives the HIV-1 pre-fusion reaction

Calibration-free &lt;em&gt;In Vitro&lt;/em&gt; Quantification of Protein Homo-oligomerization Using Commercial Instrumentation and Free, Open Source Brightness Analysis Software

Calibration-free In Vitro Quantification of Protein Homo-oligomerization Using Commercial Instrumentation and Free, Open Source Brightness Analysis Software

Chromatin condensation fluctuations rather than steady-state predict chromatin accessibility

Correction to "Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library"

Correction: 827Spatio-Temporal Quantification of FRET in Living Cells by Fast Time-Domain FLIM: A Comparative Study of Non-Fitting Methods.

Detecting protein aggregation and interaction in live cells: A guide to number and brightness.

Drosophila OTK Is a Glycosaminoglycan-Binding Protein with High Conformational Flexibility

Dual-color fluorescence lifetime correlation spectroscopy to quantify protein-protein interactions in live cell.

Dynamic interaction of amphiphysin with N-WASP regulates actin assembly

Dynamin-2 Stabilizes the HIV-1 Fusion Pore with a Low Oligomeric State.

Endogenous Labeling for Light Microscopy during HIV-1 Immune Responses

FRET microscopy in the living cell: Different approaches, strengths and weaknesses ⬇️

Fusion of mature HIV-1 particles leads to complete release of a gag-GFP-based content marker and raises the intraviral pH

Glycolysis downregulation is a hallmark of HIV-1 latency and sensitizes infected cells to oxidative stress

Homology-guided identification of a conserved motif linking the antiviral functions of IFITM3 to its oligomeric state

Homology-guided identification of a conserved motif linking the antiviral functions of IFITM3 to its oligomeric state

Imaging real-time HIV-1 virion fusion with FRET-based biosensors

Improved cellular uptake of perfluorocarbon nanoparticles for in vivo murine cardiac 19F MRS/MRI and temporal tracking of progenitor cells

Lysosome sorting of β-glucocerebrosidase by LIMP-2 is targeted by the mannose 6-phosphate receptor

Multifaceted mechanisms of HIV-1 entry inhibition by human α-defensin

Multiplexing PKA and ERK1&2 kinases FRET biosensors in living cells using single excitation wavelength dual colour FLIM.

Non fitting based FRET-FLIM analysis approaches applied to quantify protein-protein interactions in live cells

On the Whereabouts of HIV-1 Cellular Entry and Its Fusion Ports

Orthogonal fluorescent chemogenetic reporters for multicolor imaging

Pinpointing retrovirus entry sites in cells expressing alternatively spliced receptor isoforms by single virus imaging

Quantitative FRET analysis by fast acquisition time domain FLIM at high spatial resolution in living cells.

Quantitative FRET-FLIM-BlaM to Assess the Extent of HIV-1 Fusion in Live Cells

Quantitative comparison of different fluorescent protein couples for fast FRET-FLIM acquisition.

Quantitative imaging of endosome acidification and single retrovirus fusion with distinct pools of early endosomes

Quantitative study of protein-protein interactions in live cell by dual-color fluorescence correlation spectroscopy.

Repulsive guidance molecule is a structural bridge between neogenin and bone morphogenetic protein

Single-cell glycolytic activity regulates membrane tension and HIV-1 fusion

Spatio-Temporal Quantification of FRET in living cells by fast time-domain FLIM: a comparative study of non-fitting methods [corrected].

Structural Basis for Plexin Activation and Regulation

Structural basis of semaphorin-plexin cis interaction

Structure dynamics of HIV-1 Env trimers on native virions engaged with living T cells

Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library

Synchronized retrovirus fusion in cells expressing alternative receptor isoforms releases the viral core into distinct sub-cellular compartments

The nature and nurture of cell heterogeneity: accounting for macrophage gene-environment interactions with single-cell RNA-Seq

The β-Lactamase Assay: Harnessing a FRET Biosensor to Analyse Viral Fusion Mechanisms

Time-domain fluorescence lifetime imaging microscopy: a quantitative method to follow transient protein-protein interactions in living cells

Toremifene interacts with and destabilizes the Ebola virus glycoprotein

Well-Characterised Time-Gated Detector Photon Flux Resolves the Ultrastructure of DNA-Damage Nuclear Bodies with G-STED Nanoscopy

exampletestr-An easy start to unit testing R packages

filesstrings: An R package for file and string manipulation

ijtiff: An R package providing TIFF I/O for ImageJ users

nandb-number and brightness in R with a novel automatic detrending algorithm.

Calibration-free <em>In Vitro</em> Quantification of Protein Homo-oligomerization Using Commercial Instrumentation and Free, Open Source Brightness Analysis Software