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List of works by Pleuni S. Pennings

An analytically tractable model for competitive speciation.

scientific article published in January 2008

Association of orthodenticle with natural variation for early embryonic patterning in Drosophila melanogaster

scientific article published on December 2009

Classroom sound can be used to classify teaching practices in college science courses

scientific article published on 06 March 2017

Collectively Improving Our Teaching: Attempting Biology Department-wide Professional Development in Scientific Teaching

scientific article published in January 2018

Correction: More effective drugs lead to harder selective sweeps in the evolution of drug resistance in HIV-1

scientific article published on 19 January 2017

Correction: Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV

article

CpG-creating mutations are costly in many human viruses

scientific article published on 24 April 2020

Drivers of within-host genetic diversity in acute infections of viruses

scientific article published on 04 November 2020

Evidence of adaptation from ancestral variation in young populations of beach mice

scientific article

Evolutionary Dynamics in Structured Populations Under Strong Population Genetic Forces

scientific article published on 07 October 2019

Fighting microbial drug resistance: a primer on the role of evolutionary biology in public health

scientific article published on 23 March 2015

Genetic diversity, population structure and sex-biased dispersal in three co-evolving species.

scientific article published on 3 November 2009

HIV Drug Resistance: Problems and Perspectives

scientific article

HIV-1 transmission networks in a small world

scientific article published on 22 October 2013

Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance

scientific article published on 18 May 2015

Increased host aggression as an induced defense against slave-making ants

scientific article published on 6 January 2011

Inferring population genetics parameters of evolving viruses using time-series data.

scientific article published in January 2019

Loss and recovery of genetic diversity in adapting populations of HIV

scientific article (publication date: 2014)

More effective drugs lead to harder selective sweeps in the evolution of drug resistance in HIV-1

scientific article published on 15 February 2016

Oh sister, where art thou? Spatial population structure and the evolution of an altruistic defence trait.

scientific article published on 28 September 2014

Polygenic adaptation: From sweeps to subtle frequency shifts

article published in 2019

Raiders from the sky: slavemaker founding queens select for aggressive host colonies

scientific article

Reversion is most likely under high mutation supply when compensatory mutations do not fully restore fitness costs

scientific article published in 2022

Similar evolutionary potentials in an obligate ant parasite and its two host species

scientific article published on February 16, 2011

Soft Selective Sweeps in Evolutionary Rescue

scientific article published on 17 February 2017

Soft sweeps II--molecular population genetics of adaptation from recurrent mutation or migration

scientific article

Soft sweeps III: the signature of positive selection from recurrent mutation

scientific article

Soft sweeps and beyond: understanding the patterns and probabilities of selection footprints under rapid adaptation

scientific article (publication date: June 2017)

Soft sweeps: molecular population genetics of adaptation from standing genetic variation

scientific article

Specialization and local adaptation of a fungal parasite on two host plant species as revealed by two fitness traits

scientific article published on 01 January 2007

Standing Genetic Variation and the Evolution of Drug Resistance in HIV

scientific article published on June 7, 2012

Ten simple rules for designing and running a computing minor for bio/chem students

scientific article published on 14 July 2022

The population genetics of drug resistance evolution in natural populations of viral, bacterial and eukaryotic pathogens

scientific article

Within-patient HIV mutation frequencies reveal fitness costs of CpG dinucleotides, drastic amino acid changes and G→A mutations

article

Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV.

scientific article published on 28 June 2018

Wolbachia bacteria effects after experimental interspecific transfers in terrestrial isopods

scientific article