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List of works by Jakub Włodarczyk

2dSpAn: semiautomated 2-d segmentation, classification and analysis of hippocampal dendritic spine plasticity.

scientific article published on April 2016

3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines

scientific article

A new approach to interpretation of heterogeneity of fluorescence decay: effect of induced tautomeric shift and enzyme-->ligand fluorescence resonance energy transfer.

scientific article published on 12 June 2006

Analysis of FRET signals in the presence of free donors and acceptors

scientific article published on 5 October 2007

Attenuated palmitoylation of serotonin receptor 5-HT1A affects receptor function and contributes to depression-like behaviors

scientific article published on 02 September 2019

Author Correction: Quantitative 3-D morphometric analysis of individual dendritic spines

scientific article published in Scientific Reports

CD44 is expressed in non-myelinating Schwann cells of the adult rat, and may play a role in neurodegeneration-induced glial plasticity at the neuromuscular junction.

scientific article published in May 2009

CD44 regulates dendrite morphogenesis through Src tyrosine kinase-dependent positioning of the Golgi.

scientific article published on 9 October 2014

CD44: a novel synaptic cell adhesion molecule regulating structural and functional plasticity of dendritic spines

scientific article

CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.

scientific article

Cellular Senescence in Brain Aging

scientific article published in 2021

Chronic unpredictable mild stress for modeling depression in rodents: Meta-analysis of model reliability

scientific article published on 06 December 2018

Combination of dasatinib and quercetin improves cognitive abilities in aged male Wistar rats, alleviates inflammation and changes hippocampal synaptic plasticity and histone H3 methylation profile

scientific article published on 18 January 2022

Comfort During Digital Rectal Examination - Patient Preference

scientific article published on September 2015

Constitutive Gs-mediated, but not G12-mediated, activity of the 5-hydroxytryptamine 5-HT7(a) receptor is modulated by the palmitoylation of its C-terminal domain.

scientific article

Cortical blood flow imaging of mouse stroke model by high-speed Spectral OCT

scientific article published on 10 February 2011

Current microscopic methods for the neural ECM analysis

scientific article

Disrupted ATP synthase activity and mitochondrial hyperpolarisation-dependent oxidative stress is associated with p66Shc phosphorylation in fibroblasts of NARP patients

scientific article published on 31 July 2012

Dystroglycan controls dendritic morphogenesis of hippocampal neurons in vitro

scientific article published on 26 May 2015

E-cadherin, beta-catenin and stromelysin-3 expression in de novo carcinoma of the colorectum.

scientific article published in January 2001

Extracellular matrix molecules, their receptors, and secreted proteases in synaptic plasticity

scientific article

Fine-structural distribution of MMP-2 and MMP-9 activities in the rat skeletal muscle upon training: a study by high-resolution in situ zymography

scientific article

Genetically encoded FRET-based biosensor for imaging MMP-9 activity

scientific article published on 26 November 2013

Identification of the tautomeric form of formycin A in its complex with Escherichia coli purine nucleoside phosphorylase based on the effect of enzyme-ligand binding on fluorescence and phosphorescence

scientific article

Influence of matrix metalloproteinase MMP-9 on dendritic spine morphology

scientific article

Insights Into Protein S-Palmitoylation in Synaptic Plasticity and Neurological Disorders: Potential and Limitations of Methods for Detection and Analysis.

scientific article published on 29 May 2018

Interpretation of fluorescence decay kinetics in 3-methylbenzimidazolyl(5'-5')guanosine dinucleotides: exponential dependence on the number of phosphates in the polyphosphate bridge

scientific article published on 01 February 2007

Interpretation of fluorescence decays using a power-like model

scientific article published on July 2003

Interpretation of intramolecular stacking effect on the fluorescence intensity decay of 3-methylbenzimidazolyl(5'-5')guanosine dinucleotides using a model of lifetime distribution

scientific article published on 3 March 2006

Involvement of cellular metabolism in age-related LTP modifications in rat hippocampal slices

scientific article published on June 2015

MMP9: A novel function in synaptic plasticity ⬇️

scientific article published on 09 February 2012

Matrix Metalloprotease 3 Activity Supports Hippocampal EPSP-to-Spike Plasticity Following Patterned Neuronal Activity via the Regulation of NMDAR Function and Calcium Flux

scientific article published on 28 June 2016

Matrix metalloproteinase-9 involvement in the structural plasticity of dendritic spines.

scientific article

Multi-parametric imaging of murine brain using spectral and time domain optical coherence tomography.

scientific article

Novel higher-order epigenetic regulation of the Bdnf gene upon seizures.

scientific article published in February 2013

Prophylactic Ketamine Treatment Promotes Resilience to Chronic Stress and Accelerates Recovery: Correlation with Changes in Synaptic Plasticity in the CA3 Subregion of the Hippocampus ⬇️

scientific article published on 08 April 2019

Quantitative 3-D morphometric analysis of individual dendritic spines.

scientific article published on 23 February 2018

Sampling issues in quantitative analysis of dendritic spines morphology

scientific article

Signal/noise analysis of FRET-based sensors

scientific article published on October 2010

Stimulation- and palmitoylation-dependent changes in oligomeric conformation of serotonin 5-HT1A receptors

scientific article

Stress-induced Changes in the S-palmitoylation and S-nitrosylation of Synaptic Proteins

scientific article published on 16 July 2019

Synaptic Potentiation at Basal and Apical Dendrites of Hippocampal Pyramidal Neurons Involves Activation of a Distinct Set of Extracellular and Intracellular Molecular Cues.

scientific article published on 8 December 2017

Synaptic Remodeling Depends on Signaling between Serotonin Receptors and the Extracellular Matrix

scientific article published in May 2017

Synaptically released matrix metalloproteinase activity in control of structural plasticity and the cell surface distribution of GluA1-AMPA receptors

scientific article (publication date: 2014)

Targeting Histamine Receptors in Irritable Bowel Syndrome: A Critical Appraisal

scientific article

Transient ECM protease activity promotes synaptic plasticity.

scientific article published on 10 June 2016

Tunneling nanotube-mediated intercellular vesicle and protein transfer in the stroma-provided imatinib resistance in chronic myeloid leukemia cells

scientific article published on 28 October 2019

Tunneling nanotubes contribute to the stroma-mediated imatinib resistance of leukemic cells

scientific article published on 25 September 2018

Use of fibrin glue in sucrose gap method.

scientific article published in July 1988

Volumetric Doppler imaging of small animal brain using spectral and time domain optical coherence tomography

scientific article published on 10 February 2011

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