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List of works by Ryohei Ishii

A SelB/EF-Tu/aIF2γ-like protein from Methanosarcina mazei in the GTP-bound form binds cysteinyl-tRNA(Cys.).

scientific article

A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site

scientific article

A paralog of lysyl-tRNA synthetase aminoacylates a conserved lysine residue in translation elongation factor P

scientific article

A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase

scientific article

Crystal Structure of the tRNA 3′ Processing Endoribonuclease tRNase Z fromThermotoga maritima

scientific article published in Journal of Biological Chemistry

Crystal structure of archaeal tRNA(m(1)G37)methyltransferase aTrm5

scientific article

Crystal structure of tRNA adenosine deaminase (TadA) from Aquifex aeolicus

scientific article

Crystal structure of tRNA m(1)A58 methyltransferase TrmI from Aquifex aeolicus in complex with S-adenosyl-L-methionine

scientific article

Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex

scientific article published on 30 November 2018

Crystal structure of the tRNA processing enzyme RNase PH from Aquifex aeolicus

scientific article (publication date: 22 August 2003)

Crystallization and preliminary X-ray crystallographic analysis of the catalytic domain of pyrrolysyl-tRNA synthetase from the methanogenic archaeon Methanosarcina mazei

scientific article

Crystallization and preliminary X-ray crystallographic study of GenX, a lysyl-tRNA synthetase paralogue from Escherichia coli, in complex with translation elongation factor P.

scientific article

Crystallographic studies on multiple conformational states of active-site loops in pyrrolysyl-tRNA synthetase

scientific article

Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme

scientific article published in April 2004

Direct inter-subdomain interactions switch between the closed and open forms of the Hsp70 nucleotide-binding domain in the nucleotide-free state

scientific article

Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure

scientific article

GermOnline, a cross-species community knowledgebase on germ cell differentiation.

scientific article

Identification by Mn2+ rescue of two residues essential for the proton transfer of tRNase Z catalysis

scientific article published on 11 August 2006

Integrated molecular analysis of adult T cell leukemia/lymphoma.

scientific article published on 5 October 2015

Linear ubiquitination is involved in the pathogenesis of optineurin-associated amyotrophic lateral sclerosis.

scientific article published on 24 August 2016

Merlin/NF2 Functions Upstream of the Nuclear E3 Ubiquitin Ligase CRL4DCAF1 to Suppress Oncogenic Gene Expression

article

Merlin/NF2 suppresses tumorigenesis by inhibiting the E3 ubiquitin ligase CRL4(DCAF1) in the nucleus

scientific article

Molecular cloning and crystal structural analysis of a novel beta-N-acetylhexosaminidase from Paenibacillus sp. TS12 capable of degrading glycosphingolipids

scientific article

Multistep engineering of pyrrolysyl-tRNA synthetase to genetically encode N(epsilon)-(o-azidobenzyloxycarbonyl) lysine for site-specific protein modification

scientific article

Prognostic relevance of integrated genetic profiling in adult T-cell leukemia/lymphoma.

scientific article

Recurrent somatic mutations underlie corticotropin-independent Cushing's syndrome.

scientific article published on May 2014

Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family

scientific article published on 6 January 2005

Somatic RHOA mutation in angioimmunoblastic T cell lymphoma.

scientific article published on 12 January 2014

Structural and Functional Analysis of DDX41: a bispecific immune receptor for DNA and cyclic dinucleotide.

scientific article published on 10 October 2016

Structure of a dominant-negative helix-loop-helix transcriptional regulator suggests mechanisms of autoinhibition

scientific article

Structure of an archaeal TYW1, the enzyme catalyzing the second step of wye-base biosynthesis

scientific article

Substrate recognition ability differs among various prokaryotic tRNase Zs

scientific article published in 2006

The flexible arm of tRNase Z is not essential for pre-tRNA binding but affects cleavage site selection

scientific article published on 15 May 2008

The non-canonical hydroxylase structure of YfcM reveals a metal ion-coordination motif required for EF-P hydroxylation

scientific article

The structure of the flexible arm ofThermotoga maritimatRNase Z differs from those of homologous enzymes

scientific article

Variegated RHOA mutations in adult T-cell leukemia/lymphoma.

scientific article

tRNA-dependent alanylation of diacylglycerol and phosphatidylglycerol in Corynebacterium glutamicum

scientific article

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