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List of works by Trushar Shah

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Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers

scientific article
Population genomic and genome-wide association studies of agroclimatic traits in sorghum

scientific article
Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers

scientific article
Genome Sequence of Theileria parva, a Bovine Pathogen That Transforms Lymphocytes

scientific article
Genome of the Host-Cell Transforming Parasite Theileria annulata Compared with T. parva

scientific article
Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa.

scientific article
Joint linkage-linkage disequilibrium mapping is a powerful approach to detecting quantitative trait loci underlying drought tolerance in maize

scientific article
Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms

scientific article published on 11 October 2009
Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes

scientific article
Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection

scientific article published on 27 March 2010
Theileria parva candidate vaccine antigens recognized by immune bovine cytotoxic T lymphocytes

scholarly article
Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.).

scientific article
Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.)

scientific article published in 2011
Genes transcribed in the salivary glands of female Rhipicephalus appendiculatus ticks infected with Theileria parva

scientific article published in October 2004
Comparative SNP and haplotype analysis reveals a higher genetic diversity and rapider LD decay in tropical than temperate germplasm in maize

scientific article
A comprehensive transcriptome assembly of Pigeonpea (Cajanus cajan L.) using sanger and second-generation sequencing platforms

scientific article published on 11 January 2012
Pearl millet [Pennisetum glaucum (L.) R. Br.] consensus linkage map constructed using four RIL mapping populations and newly developed EST-SSRs

scientific article
Defining the transcriptome assembly and its use for genome dynamics and transcriptome profiling studies in pigeonpea (Cajanus cajan L.).

scientific article
An international reference consensus genetic map with 897 marker loci based on 11 mapping populations for tetraploid groundnut (Arachis hypogaea L.).

scientific article
Comparison of SSRs and SNPs in assessment of genetic relatedness in maize

A novel strategy for the identification of antigens that are recognised by bovine MHC class I restricted cytotoxic T cells in a protozoan infection using reverse vaccinology

scientific article published on 9 February 2007
Analysis of the transcriptome of the protozoan Theileria parva using MPSS reveals that the majority of genes are transcriptionally active in the schizont stage

scientific article
Cytoplasmic male sterility-associated chimeric open reading frames identified by mitochondrial genome sequencing of four Cajanus genotypes

scientific article published on 20 June 2013
Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome

scientific article
Dissecting tocopherols content in maize (Zea mays L.), using two segregating populations and high-density single nucleotide polymorphism markers

scientific article
Functional mechanisms of drought tolerance in subtropical maize (Zea mays L.) identified using genome-wide association mapping

scientific article
Unraveling the genetic architecture of subtropical maize (Zea mays L.) lines to assess their utility in breeding programs

scientific article
Identification of candidate sialome components expressed in ixodid tick salivary glands using secretion signal complementation in mammalian cells.

scientific article
QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii

scientific article
CicArMiSatDB: the chickpea microsatellite database

scientific article published on 21 June 2014
An integrated SNP mining and utilization (ISMU) pipeline for next generation sequencing data

scientific article
Detection of genetic integrity of conserved maize (Zea mays L.) germplasm in genebanks using SNP markers

article published in 2010
Recombination frequency variation in maize as revealed by genomewide single-nucleotide polymorphisms

Genome-Wide Identification and Analysis of Arabidopsis Sodium Proton Antiporter (NHX) and Human Sodium Proton Exchanger (NHE) Homologs in Sorghum bicolor.

scientific article published on 3 May 2018
Genetic and molecular analysis of wheat tan spot resistance effective against Pyrenophora tritici-repentis races 2 and 5

article
Using the transcriptome to annotate the genome revisited: application of massively parallel signature sequencing (MPSS).

scientific article published on 21 November 2005
The generation challenge programme platform: semantic standards and workbench for crop science

scientific article
A global overview of cassava genetic diversity

scientific article published on 06 November 2019
Trait Associations in Diversity Panels of the Two Common Bean (Phaseolus vulgaris L.) Gene Pools Grown under Well-watered and Water-Stress Conditions

scientific article published on 9 May 2017
Molecular Basis of Disease Resistance in Banana Progenitor Musa balbisiana against Xanthomonas campestris pv. musacearum

scientific article published on 07 May 2019
Extensive polymorphism of Ra86 genes in field populations of Rhipicephalus appendiculatus from Kenya.

scientific article
Bioinformatics of African Pathogens and Vectors conference. Editorial

scientific article published on 20 September 2008
Genetic analysis and QTL mapping for multiple biotic stress resistance in cassava

scientific article published on 05 August 2020
Collection, genotyping and virus elimination of cassava landraces from Tanzania and documentation of farmer knowledge

scientific article published on 17 August 2021
Agromorphologic, genetic and methylation profiling of Dioscorea and Musa species multiplied under three micropropagation systems.

scientific article published on 16 May 2019
Breedbase: a digital ecosystem for modern plant breeding

scientific article published in 2022

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