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List of works by James R Otieno

As Clear as Mud? Determining the Diversity and Prevalence of Prophages in the Draft Genomes of Estuarine Isolates of Clostridium difficile

scientific article published on 27 May 2015

Examining strain diversity and phylogeography in relation to an unusual epidemic pattern of respiratory syncytial virus (RSV) in a long-term refugee camp in Kenya

scientific article

Genetic characterization of influenza A(H3N2) viruses circulating in coastal Kenya, 2009-2017

scientific article published on 13 January 2020

Genomic epidemiology and evolutionary dynamics of respiratory syncytial virus group B in Kilifi, Kenya, 2015-17

scientific article published on 15 July 2020

Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing

scientific article published on 21 January 2015

Molecular Evolutionary Dynamics of Respiratory Syncytial Virus Group A in Recurrent Epidemics in Coastal Kenya

scientific article published on 2 March 2016

Peripheral blood mononuclear cell transcriptomes reveal an over-representation of down-regulated genes associated with immunity in HIV-exposed uninfected infants

scientific article published on 02 December 2019

Rapid spread and diversification of respiratory syncytial virus genotype ON1, Kenya

scientific article

Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015.

scientific article published on February 2017

Successive Respiratory Syncytial Virus Epidemics in Local Populations Arise from Multiple Variant Introductions, Providing Insights into Virus Persistence

scientific article

Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains

article

Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains

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