List of works - Pierre Peterlongo

Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.

scientific article published on 2 October 2017

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data

scientific article

Reference-free detection of isolated SNPs.

scientific article published on 17 November 2014

SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population.

scientific article published on 18 February 2016

GATB: Genome Assembly & Analysis Tool Box.

scientific article

Compareads: comparing huge metagenomic experiments

scientific article (publication date: 2012)

Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer

scientific article published on March 23, 2012

Development of genomic resources for the tick Ixodes ricinus: isolation and characterization of single nucleotide polymorphisms

scientific article

Read mapping on de Bruijn graphs.

scientific article

Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software

article

Lossless Filter for Multiple Repeats with Bounded Edit Distance

scholarly article published in 2009

Finding and Characterizing Repeats in Plant Genomes.

scientific article

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics

scientific article published on 10 June 2020

Colib'read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads.

scientific article published on 11 February 2016

Optimal neighborhood indexing for protein similarity search

scientific article

Critical Assessment of Metagenome Interpretation - the second round of challenges

Lossless Filter for Multiple Repetitions with Hamming Distance

scholarly article published in 2008

Critical Assessment of Metagenome Interpretation: the second round of challenges

scientific article published in April 2022

ELECTOR: evaluator for long reads correction methods

scientific article published on 14 November 2019

List of works by Pierre Peterlongo

Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data

Reference-free detection of isolated SNPs.

SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population.

GATB: Genome Assembly & Analysis Tool Box.

Compareads: comparing huge metagenomic experiments

Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer

Development of genomic resources for the tick Ixodes ricinus: isolation and characterization of single nucleotide polymorphisms

Read mapping on de Bruijn graphs.

Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software

Lossless Filter for Multiple Repeats with Bounded Edit Distance

Finding and Characterizing Repeats in Plant Genomes.

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics

Colib'read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads.

Optimal neighborhood indexing for protein similarity search

Critical Assessment of Metagenome Interpretation - the second round of challenges

Lossless Filter for Multiple Repetitions with Hamming Distance

Critical Assessment of Metagenome Interpretation: the second round of challenges

ELECTOR: evaluator for long reads correction methods